Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0040412 Chr13 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G5680 LG-5 - View
Acer truncatum Atru.chr5.1647 chr5 - View
Arabidopsis lyrata AL4G26490 scaffold_4 + View
Avicennia marina MSTRG.18315 ScioBoG_22153_HRSCAF_22259 - View
Avicennia marina MSTRG.21501 ScioBoG_26769_HRSCAF_26899 + View
Amaranthus hybridus Ah.02g111880 AmaHy_arrow1_Scaffold_2 - View
Aquilegia oxysepala Aqoxy2G03628 CHR02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5K77QF PTHR28637:SF1 - DNA REPLICATION FACTOR CDT1 arahy.Tifrunner.gnm1.Arahy.12 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JT4IXE K10727 - chromatin licensing and DNA replication factor 1 (CDT1) arahy.Tifrunner.gnm1.Arahy.02 - View
Arabidopsis thaliana AT2G31270 CDT1-like protein A Encodes a cyclin-dependent protein kinase. Involved in nuclear DNA replication and plastid division. Located in nucleus and chloroplast. homolog of yeast CDT1 A (CDT1A)%3B FUNCTIONS IN: protein binding%2C cyclin-dependent protein kinase activity%3B INVOLVED IN: chloroplast organization%2C DNA replication%3B LOCATED IN: chloroplast%2C nucleus%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA replication factor CDT1-like (InterPro:IPR014939)%3B BEST Arabidopsis thaliana protein match is: homolog of yeast CDT1 B homolog of yeast CDT1 B (TAIR:AT3G54710.1)%3B Has 1317 Blast hits to 1078 proteins in 213 species: Archae - 6%3B Bacteria - 83%3B Metazoa - 600%3B Fungi - 201%3B Plants - 122%3B Viruses - 41%3B Other Eukaryotes - 264 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB01g04051 ChrB01 - View
Brassica carinata BcaC02g11206 ChrC02 - View
Beta vulgaris EL10Ac5g10416 K10727 - chromatin licensing and DNA replication factor 1 (CDT1) Chr5_EL10_PGA_scaffold2 + View
Cicer arietinum L. Ca_09690_v3 Ca_LG4_v3 + View
Corylus avellana Haze_24608 Similar to CDT1A: CDT1-like protein a, chloroplastic (Arabidopsis thaliana OX%3D3702) 8 - View
Coffea canephora Cc01_g18450 Putative CDT1-like protein a, chloroplastic chr1 + View
Citrus clementina Ciclev10019292m.g scaffold_3 + View
Carpinus fangiana Cfa002408 Cfa01 - View
Cardamine hirsuta CARHR124860 homolog of yeast CDT1 A Chr4 + View
Carya illinoinensis CiPaw.04G185600 K10727 - chromatin licensing and DNA replication factor 1 (CDT1) Chr04 - View
Carya illinoinensis CiPaw.03G262500 K10727 - chromatin licensing and DNA replication factor 1 (CDT1) Chr03 - View
Citrullus lanatus ClCG07G000960 homolog of yeast CDT1 A LENGTH=571 CG_Chr07 - View
Cucumis melo MELO3C012906.2 CDT1-like protein a, chloroplastic chr04 + View
Carica papaya Cpa.g.sc50.34 supercontig_50 + View
Chenopodium quinoa AUR62024731 CDT1A: CDT1-like protein a, chloroplastic C_Quinoa_Scaffold_1992 + View
Chenopodium quinoa AUR62011890 CDT1A: CDT1-like protein a, chloroplastic C_Quinoa_Scaffold_2008 + View
Cucumis sativus L. CsaV3_3G022530 CDT1-like protein a, chloroplastic chr3 + View
Daucus carota DCAR_005699 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv22417 GWHABJS00000007 - View
Davidia involucrata Dinv34608 GWHABJS00000010 + View
Durio zibethinus Duzib138G0341 NW_019167893.1 - View
Durio zibethinus Duzib133G1121 NW_019167938.1 - View
Erigeron canadensis ECA247G3646 Conyza_canadensis_scaffold:7 + View
Eucalyptus grandis Eucgr.K03269 Chr11 + View
Eutrema salsugineum Thhalv10016441m.g K10727 - chromatin licensing and DNA replication factor 1 (CDT1) scaffold_10 + View
Fragaria x ananassa FAN15G1144 PTHR28637//PTHR28637:SF1 - FAMILY NOT NAMED // DNA REPLICATION FACTOR CDT1 Fvb2-4 + View
Fragaria x ananassa FAN27G3355 PTHR28637:SF1 - DNA REPLICATION FACTOR CDT1 Fvb2-1 + View
Fragaria x ananassa FAN27G3115 PTHR28637//PTHR28637:SF1 - FAMILY NOT NAMED // DNA REPLICATION FACTOR CDT1 Fvb2-1 - View
Fragaria vesca FvH4_2g21720 K10727 - chromatin licensing and DNA replication factor 1 (CDT1) Fvb2 + View
Gossypium hirsutum Gohir.A07G211800 PTHR28637:SF1 - DNA REPLICATION FACTOR CDT1 A07 - View
Gossypium hirsutum Gohir.D07G218000 PTHR28637:SF1 - DNA REPLICATION FACTOR CDT1 D07 - View
Gossypium hirsutum Gohir.A11G129800 K10727 - chromatin licensing and DNA replication factor 1 (CDT1) A11 - View
Gossypium hirsutum Gohir.D11G135500 K10727 - chromatin licensing and DNA replication factor 1 (CDT1) D11 - View
Glycine max Glyma.10G035700 K10727 - chromatin licensing and DNA replication factor 1 (CDT1) Gm10 - View
Glycine max Glyma.13G122100 K10727 - chromatin licensing and DNA replication factor 1 (CDT1) Gm13 - View
Gossypium raimondii Gorai.007G145100 Chr07 - View
Gossypium raimondii Gorai.001G252100 Chr01 - View
Helianthus annuus HanXRQChr10g0281071 Probable homolog of yeast CDT1 A HanXRQChr10 + View
Helianthus annuus HanXRQChr15g0467931 Probable homolog of yeast CDT1 B homolog of yeast CDT1 B HanXRQChr15 + View
Hydrangea macrophylla Hma1.2p1_0273F.1_g109850 Hma1.2p1_0273F.1 + View
Lupinus albus Lalb_Chr21g0313811 K10727 - chromatin licensing and DNA replication factor 1 (CDT1) Lalb_Chr21 - View
Lupinus albus Lalb_Chr02g0152301 K10727 - chromatin licensing and DNA replication factor 1 (CDT1) Lalb_Chr02 - View
Lotus japonicus Lj5g0022506 PTHR28637//PTHR28637:SF1 - FAMILY NOT NAMED // DNA REPLICATION FACTOR CDT1 chr5 + View
Lactuca sativa Lsat_1_v5_gn_9_8740 Lsat_1_v8_lg_9 - View
Magnolia biondii MBI17_g07969_MAGBIO AED:0.01 Chr17 + View
Malus domestica MD05G1199700 homolog of yeast CDT1 A Chr05 + View
Manihot esculenta Manes.12G031300 Chromosome12 - View
Medicago truncatula Medtr1g070170 DNA replication factor CDT1-like protein chr1 + View
Nelumbo nucifera Nn1g02724 chr1 - View
Nicotiana tabacum Nitab4.5_0000326g0050 Unknown Nitab4.5_0000326 - View
Olea europaea Oeu025836.1 chr16 - View
Prunus persica Prupe.8G225500 Pp08 + View
Pisum sativum Psat6g055280 DNA replication factor Cdt1 C-terminal domain chr6LG2 - View
Populus trichocarpa Potri.005G222700 K10727 - chromatin licensing and DNA replication factor 1 (CDT1) Chr05 - View
Populus trichocarpa Potri.002G040100 K10727 - chromatin licensing and DNA replication factor 1 (CDT1) Chr02 + View
Phaseolus vulgaris Phvul.007G194400 K10727 - chromatin licensing and DNA replication factor 1 (CDT1) Chr07 + View
Quercus lobata QL09p038209 9 - View
Rosa chinensis RcHm_v2.0_Chr6g0288401 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim13G0033900 chr13 - View
Rhododendron simsii Rhsim01G0265300 chr01 + View
Salix brachista Sabra05G0171400 GWHAAZH00000005 - View
Salix brachista Sabra02G0032100 GWHAAZH00000002 + View
Sechium edule Sed0018460 LG01 + View
Sechium edule Sed0024965 LG05 - View
Solanum lycopersicum Solyc06g008510.3 Cdt1-like protein chloroplastic-like (AHRD V3.3 *** A0A2K3MWV0_TRIPR) SL4.0ch06 + View
Schrenkiella parvula Sp4g13750 K10727 - chromatin licensing and DNA replication factor 1 (CDT1) ch4-6 + View
Solanum pennellii Sopen06g003280 Encodes a cyclin-dependent protein kinase. Involved in nuclear DNA replication and plastid division. Located in nucleus and chloroplast. | homolog of yeast CDT1 A (CDT1A) | FUNCTIONS IN: protein binding, cyclin-dependent protein kinase activity | INVOLVED IN: chloroplast organization, DNA replication | LOCATED IN: chloroplast, nucleus | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: DNA replication factor CDT1-like | BEST Arabidopsis thaliana protein match is: homolog of yeast CDT1 B homolog of yeast CDT1 B Spenn-ch06 + View
Selenicereus undatus Hund09595 Scaffold_10417 - View
Selenicereus undatus Hund02906 Scaffold_33678 - View
Trochodendron aralioides TAR362G0949 group17 - View
Theobroma cacao Thecc.01G260600 CDT1 A Chromosome_1 + View
Tarenaya hassleriana THA.LOC104800876 CDT1-like protein a%2C chloroplastic NW_010969548.1 + View
Trifolium pratense TPR.G3552 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI75G1405 NC_052253.1 + View
Tripterygium wilfordii TWI12G1429 NC_052243.1 - View
Vaccinium macrocarpon vmacro14841 Similar to CDT1A: CDT1-like protein a, chloroplastic (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro02652 Similar to CDT1A: CDT1-like protein a, chloroplastic (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G2946 CM024071.1 - View
Vitis vinifera GSVIVG01028303001 chr7 - View