Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Actinidia chinensis | Actinidia16312 | Lachesis_group24 | + | View | |
Actinidia chinensis | Actinidia06888 | Lachesis_group13 | + | View | |
Amaranthus hybridus | Ah.06g194420 | Protein CHROMATIN REMODELING 5 (AtCHR5) (EC 3.6.4.-) | AmaHy_arrow1_Scaffold_6 | + | View |
Davidia involucrata | Dinv08033 | GWHABJS00000003 | + | View | |
Davidia involucrata | Dinv36279 | GWHABJS00000007 | - | View | |
Durio zibethinus | Duzib177G0813 | NW_019168004.1 | + | View | |
Erythranthe guttata | Migut.D00580 | scaffold_4 | + | View | |
Lonicera japonica | Lj1C354G8 | GWHAAZE00000001 | - | View | |
Nicotiana tabacum | Nitab4.5_0000492g0040 | Helicase/SANT-associated, DNA binding, SNF2-related, P-loop containing nucleoside triphosphate hydrolase, Helicase, C-terminal, Domain of unknown function DUF4283, Helicase, superfamily 1/2, ATP-binding domain | Nitab4.5_0000492 | + | View |
Petunia axillaris | Peaxi162Scf00029g00307 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | Peaxi162Scf00029 | - | View |
Rhododendron simsii | Rhsim13G0223800 | chr13 | - | View | |
Striga asiatica | SGA_v2.0_scaffold8G04607 | scaffold8 | - | View | |
Solanum lycopersicum | Solyc11g062010.3 | Chromatin structure-remodeling complex protein SYD (AHRD V3.3 *** A0A2G2YFV9_CAPAN) | SL4.0ch11 | + | View |
Solanum pennellii | Sopen11g023970 | Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity. | SPLAYED (SYD) | CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase/SANT-associated, DNA binding , Helicase, superfamily 1/2, ATP-binding domain , SNF2-related | BEST Arabidopsis thaliana protein match is: Homeotic gene regulator | Spenn-ch11 | + | View |
Vaccinium macrocarpon | vmacro04191 | Similar to SYD: Chromatin structure-remodeling complex protein SYD (Arabidopsis thaliana OX%3D3702) | chr9_Vaccinium_macrocarpon_Stevens_v1 | + | View |