Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0028465 PREDICTED: protein PIR [Vitis vinifera] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G14740 LG-5 + View
Acer truncatum Atru.chr2.1137 chr2 + View
Arabidopsis thaliana AT3G04260 plastid transcriptionally active 3 plastid transcriptionally active 3 (PTAC3)%3B FUNCTIONS IN: DNA binding%2C nucleic acid binding%3B LOCATED IN: plastid chromosome%2C nucleus%2C chloroplast%2C nucleoid%2C membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034)%3B BEST Arabidopsis thaliana protein match is: genomes uncoupled 1 (TAIR:AT2G31400.1)%3B Has 11987 Blast hits to 8407 proteins in 477 species: Archae - 24%3B Bacteria - 285%3B Metazoa - 3588%3B Fungi - 1065%3B Plants - 3982%3B Viruses - 208%3B Other Eukaryotes - 2835 (source: NCBI BLink). Chr3 - View
Beta vulgaris EL10Ac4g09786 PTHR31407:SF5 - PLASTID TRANSCRIPTIONALLY ACTIVE 3 Chr4_EL10_PGA_scaffold1 + View
Citrus clementina Ciclev10023441m.g scaffold_3 + View
Carpinus fangiana Cfa006304 Cfa02 - View
Chenopodium quinoa AUR62006996 Protein of unknown function C_Quinoa_Scaffold_3429 + View
Durio zibethinus Duzib106G1897 NW_019168492.1 + View
Eucalyptus grandis Eucgr.B02168 Chr02 + View
Eutrema salsugineum Thhalv10020015m.g PTHR31407:SF5 - PLASTID TRANSCRIPTIONALLY ACTIVE 3 scaffold_13 + View
Fragaria x ananassa FAN09G1447 K05749 - cytoplasmic FMR1 interacting protein (CYFIP) Fvb6-2 + View
Fragaria x ananassa FAN14G5004 PF00646//PF02037//PF05994//PF07159//PF13812 - F-box domain (F-box) // SAP domain (SAP) // Cytoplasmic Fragile-X interacting family (FragX_IP) // Protein of unknown function (DUF1394) (DUF1394) // Pentatricopeptide repeat domain (PPR_3) Fvb6-1 - View
Fragaria x ananassa FAN14G3852 PTHR31407//PTHR31407:SF5 - FAMILY NOT NAMED // PLASTID TRANSCRIPTIONALLY ACTIVE 3 Fvb6-1 + View
Fragaria x ananassa FAN05G1274 K05749 - cytoplasmic FMR1 interacting protein (CYFIP) Fvb6-3 + View
Fragaria x ananassa FAN05G1240 K05749 - cytoplasmic FMR1 interacting protein (CYFIP) Fvb6-3 - View
Fragaria vesca FvH4_6g01330 K05749 - cytoplasmic FMR1 interacting protein (CYFIP) Fvb6 - View
Gossypium hirsutum Gohir.A11G244201 A11 + View
Gossypium hirsutum Gohir.D11G253550 D11 - View
Glycine max Glyma.03G253000 K05749 - cytoplasmic FMR1 interacting protein (CYFIP) Gm03 + View
Glycine max Glyma.20G221100 PTHR31407//PTHR31407:SF5 - FAMILY NOT NAMED // PLASTID TRANSCRIPTIONALLY ACTIVE 3 Gm20 - View
Glycine max Glyma.10G168600 PTHR31407//PTHR31407:SF5 - FAMILY NOT NAMED // PLASTID TRANSCRIPTIONALLY ACTIVE 3 Gm10 + View
Gossypium raimondii Gorai.007G272500 Chr07 - View
Lotus japonicus Lj5g0010111 PTHR31407//PTHR31407:SF5 - FAMILY NOT NAMED // PLASTID TRANSCRIPTIONALLY ACTIVE 3 chr5 + View
Lotus japonicus Lj1g0020458 K05749 - cytoplasmic FMR1 interacting protein (CYFIP) chr1 - View
Lonicera japonica Lj2C48G13 GWHAAZE00000002 + View
Malus domestica MD04G1234900 plastid transcriptionally active 3 Chr04 + View
Malus domestica MD12G1252700 transcription activators Chr12 + View
Manihot esculenta Manes.09G145500 Chromosome09 - View
Punica granatum PGR142G3453 NC_045128.1 + View
Prunus persica Prupe.6G354700 Pp06 + View
Pisum sativum Psat6g141840 Protein kinase domain chr6LG2 - View
Populus trichocarpa Potri.013G051200 K05749 - cytoplasmic FMR1 interacting protein (CYFIP) Chr13 + View
Populus trichocarpa Potri.019G025100 PTHR31407//PTHR31407:SF5 - FAMILY NOT NAMED // PLASTID TRANSCRIPTIONALLY ACTIVE 3 Chr19 + View
Rosa chinensis RcHm_v2.0_Chr3g0448901 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim05G0168900 chr05 + View
Salix brachista Sabra13G0046600 GWHAAZH00000013 + View
Salix brachista Sabra19G0034700 GWHAAZH00000019 + View
Simmondsia chinensis Sc09g0001770 GWHAASQ00000009 - View
Sechium edule Sed0017844 LG06 - View
Schrenkiella parvula Sp3g03170 PTHR31407//PTHR31407:SF5 - FAMILY NOT NAMED // PLASTID TRANSCRIPTIONALLY ACTIVE 3 ch3-1 - View
Selenicereus undatus Hund07164 Scaffold_33676 - View
Theobroma cacao Thecc.05G264800 Transcription activators Chromosome_5 - View
Vaccinium macrocarpon vmacro19963 Similar to PIR: Protein PIR (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G2591 CM024071.1 + View
Vanilla planifolia HPP92_025395 CM028163.1 + View
Vitis vinifera GSVIVG01026351001 chr4 + View