Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG5G20070 | LG-5 | - | View | |
Acer truncatum | Atru.chr12.463 | chr12 | + | View | |
Actinidia chinensis | Actinidia13873 | Lachesis_group21 | - | View | |
Actinidia chinensis | Actinidia29224 | Lachesis_group3 | + | View | |
Arabidopsis lyrata | AL4G36960 | scaffold_4 | + | View | |
Aquilegia oxysepala | Aqoxy2G02096 | CHR02 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.G8Y61E | K11713 - geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] (PGTB1) | arahy.Tifrunner.gnm1.Arahy.04 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.53WLRG | K11713 - geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] (PGTB1) | arahy.Tifrunner.gnm1.Arahy.14 | - | View |
Arabidopsis thaliana | AT2G39550 | Prenyltransferase family protein encodes the beta subunit of geranylgeranyl transferase (GGT-IB)%2C involved in both ABA-mediated and auxin signaling pathways. PGGT-I%3B CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930)%2C Prenyltransferase/squalene oxidase (InterPro:IPR001330)%3B BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 1 (TAIR:AT5G12210.1)%3B Has 1518 Blast hits to 1317 proteins in 251 species: Archae - 0%3B Bacteria - 20%3B Metazoa - 603%3B Fungi - 437%3B Plants - 177%3B Viruses - 0%3B Other Eukaryotes - 281 (source: NCBI BLink). | Chr2 | + | View |
Amborella trichopoda | ATR0559G127 | AmTr_v1.0_scaffold00012 | - | View | |
Brassica carinata | BcaB02g09111 | ChrB02 | - | View | |
Brassica carinata | BcaB06g29096 | ChrB06 | + | View | |
Brassica napus | A05p06840 | A05 | - | View | |
Brassica napus | C04p08110 | C04 | - | View | |
Brassica rapa | BraA05t19650Z | A05 | - | View | |
Beta vulgaris | EL10Ac2g03391 | K11713 - geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] (PGTB1) | Chr2_EL10_PGA_scaffold6 | + | View |
Capsicum annuum | CAN.G1013.12 | PGAv.1.6.scaffold1013 | - | View | |
Cannabis sativa | CANSAT56G3892 | NC_044371.1 | - | View | |
Cicer arietinum L. | Ca_07253_v3 | Ca_LG3_v3 | - | View | |
Corylus avellana | Haze_17048 | Similar to GGB: Geranylgeranyl transferase type-1 subunit beta (Arabidopsis thaliana OX%3D3702) | 11 | - | View |
Coffea canephora | Cc02_g08000 | Putative Geranylgeranyl transferase type-1 subunit beta | chr2 | + | View |
Citrus clementina | Ciclev10031583m.g | scaffold_4 | + | View | |
Carpinus fangiana | Cfa001493 | Cfa01 | + | View | |
Cardamine hirsuta | CARHR134420 | Geranylgeranyl transferase type I beta subunit, putative | Chr4 | + | View |
Carya illinoinensis | CiPaw.02G183200 | K11713 - geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] (PGTB1) | Chr02 | - | View |
Citrullus lanatus | ClCG09G019960 | Geranylgeranyl transferase type I beta subunit, putative | CG_Chr09 | + | View |
Cucumis melo | MELO3C021654.2 | Geranylgeranyl transferase type-1 subunit beta | chr09 | + | View |
Carica papaya | Cpa.g.sc1.396 | supercontig_1 | - | View | |
Chenopodium quinoa | AUR62038353 | GGB: Geranylgeranyl transferase type-1 subunit beta | C_Quinoa_Scaffold_1034 | + | View |
Cucumis sativus L. | CsaV3_5G026490 | Geranylgeranyl transferase type-1 subunit beta | chr5 | - | View |
Davidia involucrata | Dinv31447 | GWHABJS00000004 | - | View | |
Davidia involucrata | Dinv26002 | GWHABJS00000009 | + | View | |
Durio zibethinus | Duzib106G0269 | NW_019168492.1 | + | View | |
Erigeron canadensis | ECA238G0092 | Conyza_canadensis_scaffold:6 | - | View | |
Eucalyptus grandis | Eucgr.J00022 | Chr10 | + | View | |
Eutrema salsugineum | Thhalv10016771m.g | 2.5.1.59//2.5.1.60 - Protein geranylgeranyltransferase type I / Type I protein geranyl-geranyltransferase // Protein geranylgeranyltransferase type II / Type II protein geranyl-geranyltransferase | scaffold_10 | + | View |
Fragaria x ananassa | FAN06G4047 | 2.5.1.59 - Protein geranylgeranyltransferase type I / Type I protein geranyl-geranyltransferase | Fvb7-2 | + | View |
Fragaria x ananassa | FAN01G3064 | 2.5.1.59 - Protein geranylgeranyltransferase type I / Type I protein geranyl-geranyltransferase | Fvb7-4 | + | View |
Fragaria x ananassa | FAN01G2389 | K11713 - geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] (PGTB1) | Fvb7-4 | + | View |
Fragaria x ananassa | FAN06G5027 | K11713 - geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] (PGTB1) | Fvb7-2 | - | View |
Fragaria x ananassa | FAN03G1562 | K11713 - geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] (PGTB1) | Fvb7-3 | + | View |
Fragaria x ananassa | FAN10G0846 | PTHR11774:SF4 - GERANYLGERANYL TRANSFERASE TYPE-1 SUBUNIT BETA | Fvb7-1 | - | View |
Fragaria vesca | FvH4_7g22110 | K11713 - geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] (PGTB1) | Fvb7 | - | View |
Gossypium hirsutum | Gohir.D10G225700 | K11713 - geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] (PGTB1) | D10 | - | View |
Gossypium hirsutum | Gohir.A10G216800 | PTHR11774:SF4 - GERANYLGERANYL TRANSFERASE TYPE-1 SUBUNIT BETA | A10 | - | View |
Glycine max | Glyma.02G093000 | K11713 - geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] (PGTB1) | Gm02 | + | View |
Glycine max | Glyma.18G289300 | K11713 - geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] (PGTB1) | Gm18 | - | View |
Gossypium raimondii | Gorai.011G256900 | Chr11 | - | View | |
Helianthus annuus | HanXRQChr14g0458171 | Probable prenyltransferase family protein | HanXRQChr14 | + | View |
Lupinus albus | Lalb_Chr10g0091731 | K11713 - geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] (PGTB1) | Lalb_Chr10 | + | View |
Lotus japonicus | Lj1g0022473 | K11713 - geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] (PGTB1) | chr1 | + | View |
Lonicera japonica | Lj1C935G17 | GWHAAZE00000001 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_2_119720 | Lsat_1_v8_lg_2 | + | View | |
Magnolia biondii | MBI05_g44084_MAGBIO | AED:0.14 | Chr05 | + | View |
Malus domestica | MD07G1196300 | Prenyltransferase family protein | Chr07 | - | View |
Malus domestica | MD01G1126400 | Prenyltransferase family protein | Chr01 | - | View |
Manihot esculenta | Manes.10G031500 | Chromosome10 | + | View | |
Medicago truncatula | Medtr7g024540 | geranylgeranyltransferase type I beta subunit | chr7 | - | View |
Nelumbo nucifera | Nn2g10394 | chr2 | + | View | |
Olea europaea | Oeu059724.1 | chr12 | + | View | |
Petunia axillaris | Peaxi162Scf00015g00149 | Geranylgeranyl transferase type-1 subunit beta | Peaxi162Scf00015 | + | View |
Punica granatum | PGR044G0630 | NC_045134.1 | - | View | |
Prunus persica | Prupe.2G233300 | Pp02 | - | View | |
Papaver somniferum | PSO151G0110 | NW_020650971.1 | + | View | |
Populus trichocarpa | Potri.008G054500 | PTHR11774:SF4 - GERANYLGERANYL TRANSFERASE TYPE-1 SUBUNIT BETA | Chr08 | - | View |
Populus trichocarpa | Potri.010G206001 | K11713 - geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] (PGTB1) | Chr10 | + | View |
Phaseolus vulgaris | Phvul.008G012800 | K11713 - geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] (PGTB1) | Chr08 | + | View |
Quercus lobata | QL08p059185 | 8 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr1g0366501 | RcHm_v2.0_Chr1 | - | View | |
Salvia bowleyana | SalBow6G7105 | GWHASIU00000002 | - | View | |
Salix brachista | Sabra10G0159200 | GWHAAZH00000010 | + | View | |
Salix brachista | Sabra08G0039300 | GWHAAZH00000008 | - | View | |
Sechium edule | Sed0015354 | LG01 | + | View | |
Solanum lycopersicum | Solyc05g054520.4 | Geranylgeranyl transferase type-1 subunit beta (AHRD V3.3 *** A0A1U8GTT6_CAPAN) | SL4.0ch05 | + | View |
Schrenkiella parvula | Sp4g21840 | 2.5.1.59//2.5.1.60 - Protein geranylgeranyltransferase type I / Type I protein geranyl-geranyltransferase // Protein geranylgeranyltransferase type II / Type II protein geranyl-geranyltransferase | ch4-6 | + | View |
Solanum pennellii | Sopen05g033000 | encodes the beta subunit of geranylgeranyl transferase (GGT-IB), involved in both ABA-mediated and auxin signaling pathways. | PGGT-I | CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid , Prenyltransferase/squalene oxidase | BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 1 | Spenn-ch05 | + | View |
Solanum tuberosum | PGSC0003DMG400023528 | Geranylgeranyltransferase type I beta subunit | ST4.03ch05 | + | View |
Trochodendron aralioides | TAR636G1861 | group1 | - | View | |
Theobroma cacao | Thecc.10G044200 | Prenyltransferase family protein | Chromosome_10 | + | View |
Tarenaya hassleriana | THA.LOC104824271 | geranylgeranyl transferase type-1 subunit beta | NW_010966881.1 | + | View |
Trifolium pratense | TPR.G15521 | Tp57577_TGAC_v2_LG6 | + | View | |
Tripterygium wilfordii | TWI63G0178 | NC_052240.1 | - | View | |
Tripterygium wilfordii | TWI15G0276 | NC_052247.1 | - | View | |
Vaccinium macrocarpon | vmacro10241 | Similar to GGB: Geranylgeranyl transferase type-1 subunit beta (Arabidopsis thaliana OX%3D3702) | chr8_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vigna mungo | VMungo1383G0472 | CM024070.1 | + | View | |
Vitis vinifera | GSVIVG01016534001 | chr13 | + | View |