Gene: AT2G39550

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G39550
  • Transcript Identifier AT2G39550.1
  • Gene Type Coding gene
  • Location Chr2 : 16501666-16504144 : positive

Gene Family Information

  • ID HOM05D006021
  • #Genes/#Species 131/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G39550.1
  • symbol PGGT-I
  • uniprot O80642

Descriptions

  • Description Prenyltransferase family protein
  • Computational description PGGT-I; CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 1 (TAIR:AT5G12210.1); Has 1518 Blast hits to 1317 proteins in 251 species: Archae - 0; Bacteria - 20; Metazoa - 603; Fungi - 437; Plants - 177; Viruses - 0; Other Eukaryotes - 281 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0018344
IEA
GOA Databaseprotein geranylgeranylation
GO:0018344
IDA, IMP
IBA
Gene Ontologyprotein geranylgeranylation1 2 3
GO:0018344
IEA
InterProprotein geranylgeranylation
GO:0018342
IBA
Gene Ontologyprotein prenylation3
GO:0009788
TAS
Gene Ontologynegative regulation of abscisic acid-activated signaling pathway2
GO:0009737
IMP
Gene Ontologyresponse to abscisic acid2
GO:0009733
IMP
Gene Ontologyresponse to auxin2
GO:0009414
IMP
Gene Ontologyresponse to water deprivation2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004662
IEA
GOA DatabaseCAAX-protein geranylgeranyltransferase activity
GO:0004662
IDA, IMP
Gene OntologyCAAX-protein geranylgeranyltransferase activity1 2
GO:0008318
IEA
GOA Databaseprotein prenyltransferase activity
GO:0008318
IEA
InterProprotein prenyltransferase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0004661
IEA
GOA Databaseprotein geranylgeranyltransferase activity
GO:0004661
IEA
InterProprotein geranylgeranyltransferase activity
GO:0004659
IEA
GOA Databaseprenyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046982
IPI
Gene Ontologyprotein heterodimerization activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005953
IEA
GOA DatabaseCAAX-protein geranylgeranyltransferase complex
GO:0005953
IPI
IBA
Gene OntologyCAAX-protein geranylgeranyltransferase complex1 3
GO:0005953
IEA
InterProCAAX-protein geranylgeranyltransferase complex
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041960 Geranylgeranyl transferase type-1 subunit beta
IPR001330 PFTB repeat
IPR045089 Prenyltransferase subunit beta
IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
Mapman id Description
18.3.2.1.2 Protein modification.lipidation.Cys-linked prenylation.type-I protein prenyltransferase heterodimer.subunit beta