Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0041820 Pectin lyase-like superfamily protein isoform 2 [Theobroma cacao] Chr8 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G2460 LG-6 - View
Acer truncatum Atru.chr10.385 chr10 + View
Arabidopsis lyrata AL7G33800 scaffold_7 + View
Avicennia marina MSTRG.7606 ScioBoG_102840_HRSCAF_103099 - View
Avicennia marina MSTRG.16367 ScioBoG_19538_HRSCAF_19626 - View
Aquilegia oxysepala Aqoxy1G01404 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SI7AR4 PTHR33928:SF2 - POLYGALACTURONASE QRT3 arahy.Tifrunner.gnm1.Arahy.04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.N144JB PTHR33928:SF2 - POLYGALACTURONASE QRT3 arahy.Tifrunner.gnm1.Arahy.14 + View
Arabidopsis thaliana AT4G20040 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G20050.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaC09g51347 ChrC09 + View
Brassica napus C01p14040 C01 - View
Brassica napus A01p11840 A01 - View
Brassica napus C07p50700 C07 - View
Brassica napus A03p52270 A03 - View
Brassica oleracea BolC7t45573H C7 - View
Brassica rapa BraA08t33448Z A08 - View
Brassica rapa BraA03t14302Z A03 - View
Brassica rapa BraA01t01126Z A01 - View
Corylus avellana Haze_06164 Similar to QRT3: Polygalacturonase QRT3 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc09_g05370 Polygalacturonase QRT3 chr9 + View
Citrus clementina Ciclev10015034m.g scaffold_2 + View
Cardamine hirsuta CARHR226840 Polygalacturonase QRT3 Chr7 - View
Carya illinoinensis CiPaw.10G062000 PTHR33928:SF2 - POLYGALACTURONASE QRT3 Chr10 + View
Cucumis melo MELO3C007031.2 Polygalacturonase QRT3 chr08 - View
Carica papaya Cpa.g.sc30.123 supercontig_30 + View
Capsella rubella Carub.0007s2108 PTHR33928:SF2 - POLYGALACTURONASE QRT3 scaffold_7 + View
Cucumis sativus L. CsaV3_6G052790 polygalacturonase QRT3-like chr6 + View
Daucus carota DCAR_007778 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_001282 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_003764 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv19788 GWHABJS00000005 + View
Davidia involucrata Dinv31179 GWHABJS00000002 + View
Durio zibethinus Duzib132G0206 NW_019167915.1 + View
Durio zibethinus Duzib248G0357 NW_019168048.1 + View
Eucalyptus grandis Eucgr.D00019 Chr04 + View
Eucalyptus grandis Eucgr.E04312 Chr05 - View
Erythranthe guttata Migut.M02003 scaffold_13 - View
Eutrema salsugineum Thhalv10025078m.g PTHR33928:SF2 - POLYGALACTURONASE QRT3 scaffold_1 + View
Fragaria x ananassa FAN25G2479 PTHR33928//PTHR33928:SF2 - FAMILY NOT NAMED // POLYGALACTURONASE QRT3 Fvb3-1 + View
Fragaria x ananassa FAN21G0916 3.2.1.15 - Polygalacturonase / Pectinase Fvb3-2 - View
Fragaria vesca FvH4_3g12830 3.2.1.15 - Polygalacturonase / Pectinase Fvb3 - View
Gossypium hirsutum Gohir.D12G047600 3.2.1.15 - Polygalacturonase / Pectinase D12 - View
Gossypium hirsutum Gohir.A12G048900 3.2.1.15 - Polygalacturonase / Pectinase A12 - View
Glycine max Glyma.09G050900 PTHR33928:SF2 - POLYGALACTURONASE QRT3 Gm09 + View
Glycine max Glyma.05G133800 3.2.1.15 - Polygalacturonase / Pectinase Gm05 - View
Glycine max Glyma.08G088300 3.2.1.15 - Polygalacturonase / Pectinase Gm08 - View
Gossypium raimondii Gorai.008G050300 Chr08 - View
Lupinus albus Lalb_Chr18g0052081 3.2.1.15 - Polygalacturonase / Pectinase Lalb_Chr18 + View
Lotus japonicus Lj4g0002649 3.2.1.15 - Polygalacturonase / Pectinase chr4 - View
Lotus japonicus Lj6g0013564 3.2.1.15 - Polygalacturonase / Pectinase chr6 - View
Lonicera japonica Lj1C1148G7 GWHAAZE00000001 - View
Lonicera japonica Lj2A343T74 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_2_60941 PTHR33928:SF2 - POLYGALACTURONASE QRT3 Lsat_1_v8_lg_2 + View
Malus domestica MD10G1228300 Pectin lyase-like superfamily protein Chr10 + View
Malus domestica MD05G1247500 Pectin lyase-like superfamily protein Chr05 + View
Manihot esculenta Manes.16G051600 Chromosome16 - View
Medicago truncatula Medtr4g094732 polygalacturonase QRT3-like protein chr4 - View
Medicago truncatula Medtr2g035760 polygalacturonase QRT3-like protein chr2 + View
Olea europaea Oeu052634.1 chr13 + View
Olea europaea Oeu046925.1 chr7 + View
Petunia axillaris Peaxi162Scf00199g00105 Pectin lyase-like superfamily protein Peaxi162Scf00199 - View
Punica granatum PGR042G2512 NC_045130.1 - View
Punica granatum PGR004G0813 NC_045131.1 - View
Prunus persica Prupe.4G116400 3.2.1.15 - Polygalacturonase / Pectinase Pp04 - View
Pisum sativum Psat1g150000 Pectate lyase superfamily protein chr1LG6 - View
Phaseolus vulgaris Phvul.002G188700 3.2.1.15 - Polygalacturonase / Pectinase Chr02 + View
Phaseolus vulgaris Phvul.009G242600 3.2.1.15 - Polygalacturonase / Pectinase Chr09 - View
Quercus lobata QL11p012477 11 + View
Rosa chinensis RcHm_v2.0_Chr5g0020771 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim13G0132700 chr13 - View
Striga asiatica SGA_v2.0_scaffold175G39340 scaffold175 + View
Salvia bowleyana SalBow8G4823 GWHASIU00000004 - View
Sechium edule Sed0007627 LG14 - View
Solanum lycopersicum Solyc02g068400.3 Pectin lyase-like superfamily protein (AHRD V3.3 *** AT4G20050.7) SL4.0ch02 + View
Schrenkiella parvula Sp7g18500 PF13229 - Right handed beta helix region (Beta_helix) ch7-4 - View
Solanum pennellii Sopen02g017530 Encodes a polygalacturonase that plays a direct role in degrading the pollen mother cell wall during microspore development. | QUARTET 3 (QRT3) | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: microsporogenesis, pollen exine formation | LOCATED IN: endomembrane system | EXPRESSED IN: 16 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400009418 Polygalacturonase QRT3 ST4.03ch02 + View
Trochodendron aralioides TAR627G0086 group6 + View
Trochodendron aralioides TAR624G1395 group9 - View
Trochodendron aralioides TAR629G1068 group0 - View
Theobroma cacao Thecc.02G004900 Pectin lyase-like superfamily protein Chromosome_2 + View
Tarenaya hassleriana THA.LOC104811771 polygalacturonase QRT3 isoform X2 NW_010960187.1 - View
Tarenaya hassleriana THA.LOC104806223 polygalacturonase QRT3-like NW_010962392.1 - View
Trifolium pratense TPR.G31236 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI63G0018 NC_052240.1 - View
Tripterygium wilfordii TWI15G0655 NC_052247.1 - View
Tripterygium wilfordii TWI38G2090 NC_052252.1 - View
Vitis vinifera GSVIVG01012139001 chr1 + View