Gene: Sopen02g017530

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g017530
  • Transcript Identifier Sopen02g017530.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 41601677-41603463 : positive

Gene Family Information

  • ID HOM05D002070
  • #Genes/#Species 321/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g017530.1

Descriptions

  • Description Encodes a polygalacturonase that plays a direct role in degrading the pollen mother cell wall during microspore development. | QUARTET 3 (QRT3) | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: microsporogenesis, pollen exine formation | LOCATED IN: endomembrane system | EXPRESSED IN: 16 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009556
ISO
PLAZA Integrative Orthologymicrosporogenesis AT4G20050
GO:0010584
ISO
PLAZA Integrative Orthologypollen exine formation AT4G20050

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004650
IEA
InterPropolygalacturonase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011050 Pectin lyase fold/virulence factor
IPR024535 Pectate lyase superfamily protein
IPR012334 Pectin lyase fold
IPR039279 Polygalacturonase QRT3-like
IPR006626 Parallel beta-helix repeat
Mapman id Description
21.3.5.1.2 Cell wall organisation.pectin.modification and degradation.polygalacturonase activities.polygalacturonase (QRT3)