Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG3G13580 | LG-3 | + | View | |
Acer truncatum | Atru.chr7.497 | chr7 | - | View | |
Actinidia chinensis | Actinidia20960 | Lachesis_group6 | + | View | |
Arabidopsis lyrata | AL7G21750 | scaffold_7 | - | View | |
Avicennia marina | MSTRG.19680 | ScioBoG_25048_HRSCAF_25167 | + | View | |
Amaranthus hybridus | Ah.09g229540 | Putative RING-H2 finger protein ATL49 (EC 2.3.2.27) (Protein MATERNAL EFFECT EMBRYO ARREST 16) (RING-type E3 ubiquitin transferase ATL49) | AmaHy_arrow1_Scaffold_9 | + | View |
Aquilegia oxysepala | Aqoxy7G03233 | CHR07 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.11SGI5 | PTHR14155:SF80 - RING-H2 FINGER PROTEIN ATL13-RELATED | arahy.Tifrunner.gnm1.Arahy.11 | + | View |
Arabidopsis thaliana | AT4G30370 | RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: response to chitin%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G18670.1)%3B Has 7837 Blast hits to 7816 proteins in 262 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2070%3B Fungi - 511%3B Plants - 4382%3B Viruses - 17%3B Other Eukaryotes - 857 (source: NCBI BLink). | Chr4 | - | View |
Amborella trichopoda | ATR0580G125 | AmTr_v1.0_scaffold00019 | + | View | |
Cannabis sativa | CANSAT11G1003 | NC_044377.1 | + | View | |
Cannabis sativa | CANSAT11G1973 | NC_044377.1 | - | View | |
Corylus avellana | Haze_22158 | Similar to ATL56: RING-H2 finger protein ATL56 (Arabidopsis thaliana OX%3D3702) | 3 | - | View |
Coffea canephora | Cc06_g13880 | Putative uncharacterized protein | chr6 | - | View |
Citrus clementina | Ciclev10008104m.g | scaffold_1 | + | View | |
Carpinus fangiana | Cfa013542 | Cfa05 | - | View | |
Carya illinoinensis | CiPaw.08G039600 | PTHR14155:SF138 - GH10160P | Chr08 | - | View |
Carya illinoinensis | CiPaw.07G186900 | PTHR14155:SF80 - RING-H2 FINGER PROTEIN ATL13-RELATED | Chr07 | + | View |
Citrullus lanatus | ClCG11G012580 | Ring finger protein, putative | CG_Chr11 | - | View |
Cucumis melo | MELO3C004094.2 | RING-H2 finger protein ATL13 | chr05 | - | View |
Carica papaya | Cpa.g.sc75.12 | supercontig_75 | - | View | |
Chenopodium quinoa | AUR62040280 | ATL56: RING-H2 finger protein ATL56 | C_Quinoa_Scaffold_1385 | + | View |
Capsella rubella | Carub.0007s1020 | PTHR14155:SF80 - RING-H2 FINGER PROTEIN ATL13-RELATED | scaffold_7 | - | View |
Cucumis sativus L. | CsaV3_2G007910 | RING-H2 finger protein ATL13 | chr2 | + | View |
Daucus carota | DCAR_017945 | hypothetical protein | DCARv2_Chr5 | - | View |
Daucus carota | DCAR_014718 | hypothetical protein | DCARv2_Chr4 | + | View |
Davidia involucrata | Dinv41302 | GWHABJS00000013 | - | View | |
Davidia involucrata | Dinv43318 | GWHABJS00000085 | + | View | |
Durio zibethinus | Duzib168G0865 | NW_019168159.1 | + | View | |
Erigeron canadensis | ECA240G1695 | Conyza_canadensis_scaffold:5 | + | View | |
Erigeron canadensis | ECA236G1765 | Conyza_canadensis_scaffold:3 | - | View | |
Eucalyptus grandis | Eucgr.C01247 | Chr03 | - | View | |
Eucalyptus grandis | Eucgr.C00203 | Chr03 | - | View | |
Erythranthe guttata | Migut.J01421 | scaffold_10 | + | View | |
Erythranthe guttata | Migut.K00273 | scaffold_11 | - | View | |
Eutrema salsugineum | Thhalv10025087m.g | PTHR14155:SF80 - RING-H2 FINGER PROTEIN ATL13-RELATED | scaffold_1 | - | View |
Fragaria x ananassa | FAN17G0574 | PTHR14155:SF138 - GH10160P | Fvb4-2 | + | View |
Fragaria x ananassa | FAN22G0291 | PTHR14155:SF138 - GH10160P | Fvb4-1 | - | View |
Gossypium hirsutum | Gohir.A08G235300 | PTHR14155:SF80 - RING-H2 FINGER PROTEIN ATL13-RELATED | A08 | + | View |
Gossypium hirsutum | Gohir.D08G255700 | PTHR14155:SF80 - RING-H2 FINGER PROTEIN ATL13-RELATED | D08 | + | View |
Glycine max | Glyma.17G068200 | PTHR14155:SF138 - GH10160P | Gm17 | - | View |
Hydrangea macrophylla | Hma1.2p1_0921F.1_g236780 | Hma1.2p1_0921F.1 | - | View | |
Lupinus albus | Lalb_Chr07g0180101 | PTHR14155:SF80 - RING-H2 FINGER PROTEIN ATL13-RELATED | Lalb_Chr07 | + | View |
Lotus japonicus | Lj4g0015174 | PTHR14155//PTHR14155:SF80 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL13-RELATED | chr4 | - | View |
Lonicera japonica | Lj7P467T12 | GWHAAZE00000007 | + | View | |
Lonicera japonica | Lj9P729T20 | GWHAAZE00000009 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_7_52560 | Lsat_1_v8_lg_7 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_8_65840 | PTHR14155:SF80 - RING-H2 FINGER PROTEIN ATL13-RELATED | Lsat_1_v8_lg_8 | + | View |
Magnolia biondii | MBI14_g08078_MAGBIO | AED:0.00 | Chr14 | + | View |
Magnolia biondii | MBI15_g34418_MAGBIO | AED:0.00 | Chr15 | + | View |
Malus domestica | MD13G1260900 | RING/U-box superfamily protein | Chr13 | - | View |
Malus domestica | MD16G1263000 | RING/U-box superfamily protein | Chr16 | + | View |
Medicago truncatula | Medtr4g129335 | zinc finger, C3HC4 type (RING finger) protein | chr4 | - | View |
Nelumbo nucifera | Nn8g40250 | chr8 | + | View | |
Olea europaea | Oeu058829.1 | scaffold793 | + | View | |
Oryza sativa ssp. japonica | Os02g0790600 | Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8). | chr02 | - | View |
Punica granatum | PGR102G2274 | NC_045129.1 | + | View | |
Prunus persica | Prupe.1G096100 | PTHR14155:SF138 - GH10160P | Pp01 | - | View |
Pisum sativum | Psat4g010640 | Ring finger domain | chr4LG4 | + | View |
Papaver somniferum | PSO782G4041 | NC_039365.1 | + | View | |
Papaver somniferum | PSO063G6927 | NC_039364.1 | + | View | |
Populus trichocarpa | Potri.006G176700 | PTHR14155:SF80 - RING-H2 FINGER PROTEIN ATL13-RELATED | Chr06 | + | View |
Populus trichocarpa | Potri.018G098500 | PTHR14155:SF80 - RING-H2 FINGER PROTEIN ATL13-RELATED | Chr18 | + | View |
Phaseolus vulgaris | Phvul.003G150700 | PTHR14155:SF138 - GH10160P | Chr03 | - | View |
Quercus lobata | QL02p095731 | CM012294 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr4g0404731 | RcHm_v2.0_Chr4 | - | View | |
Rhododendron simsii | Rhsim03G0262000 | chr03 | - | View | |
Striga asiatica | SGA_v2.0_scaffold66G22513 | scaffold66 | - | View | |
Salix brachista | Sabra06G0134900 | GWHAAZH00000006 | + | View | |
Salix brachista | Sabra18G0085300 | GWHAAZH00000018 | + | View | |
Sechium edule | Sed0018113 | LG03 | - | View | |
Solanum lycopersicum | Solyc07g006360.1 | RING-H2 finger protein ATL13-like (AHRD V3.3 *** A0A2I4FHA6_9ROSI) | SL4.0ch07 | + | View |
Schrenkiella parvula | Sp6g19430 | PTHR14155:SF80 - RING-H2 FINGER PROTEIN ATL13-RELATED | ch6-6 | + | View |
Solanum pennellii | Sopen07g002450 | RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: response to karrikin | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 9 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein | Spenn-ch07 | + | View |
Solanum tuberosum | PGSC0003DMG400043193 | Ring finger protein | ST4.03ch07 | + | View |
Trochodendron aralioides | TAR626G0492 | group3 | + | View | |
Theobroma cacao | Thecc.09G161200 | RING-H2 finger protein ATL13 | Chromosome_9 | - | View |
Tarenaya hassleriana | THA.LOC104811822 | RING-H2 finger protein ATL13-like | NW_010965372.1 | + | View |
Vaccinium macrocarpon | vmacro06038 | Similar to ATL13: RING-H2 finger protein ATL13 (Arabidopsis thaliana OX%3D3702) | chr2_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vaccinium macrocarpon | vmacro13076 | Similar to ATL13: RING-H2 finger protein ATL13 (Arabidopsis thaliana OX%3D3702) | chr11_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Zea mays | Zm00001eb257520 | Zm00001e016092 RING-H2 finger protein ATL13 | 5 | - | View |