Gene: Sopen07g002450
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen07g002450
- Transcript Identifier Sopen07g002450.1
- Gene Type Coding gene
- Location Spenn-ch07 : 1447099-1448526 : positive
Gene Family Information
- ID HOM05D000086
- #Genes/#Species 3623/98
- Phylogenetic origin
- ID ORTHO05D000983
- #Genes/#Species 529/92
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen07g002450.1
Descriptions
- Description RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: response to karrikin | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 9 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT2G18650 |
| GO:0080167 | ISO | PLAZA Integrative Orthology | response to karrikin | AT4G30400 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.2.1.4.3.3.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ATL-subclass ligase |