Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr7.1693 chr7 + View
Actinidia chinensis Actinidia29923 Lachesis_group25 + View
Actinidia chinensis Actinidia38472 Lachesis_group8 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3W29E4 K15176 - RNA polymerase-associated protein CTR9 (CTR9) arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.13CNWC PTHR14027:SF2 - RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 HOMOLOG arahy.Tifrunner.gnm1.Arahy.13 + View
Beta vulgaris EL10Ac8g19107 K15176 - RNA polymerase-associated protein CTR9 (CTR9) Chr8_EL10_PGA_scaffold4 - View
Corylus avellana Haze_25986 Similar to VIP6: Protein CTR9 homolog (Arabidopsis thaliana OX%3D3702) 8 + View
Coffea canephora Cc06_g12030 Putative RNA polymerase-associated protein CTR9 homolog chr6 + View
Carpinus fangiana Cfa003017 Cfa01 - View
Carya illinoinensis CiPaw.03G207700 K15176 - RNA polymerase-associated protein CTR9 (CTR9) Chr03 - View
Citrullus lanatus ClCG03G015190 RNA polymerase-associated CTR9-like protein CG_Chr03 - View
Cucumis melo MELO3C015512.2 protein CTR9 homolog chr02 + View
Carica papaya Cpa.g.sc28.63 supercontig_28 - View
Chenopodium quinoa AUR62025189 VIP6: Protein CTR9 homolog C_Quinoa_Scaffold_4329 + View
Cucumis sativus L. CsaV3_1G040850 RNA polymerase-associated protein CTR9 like chr1 + View
Daucus carota DCAR_024741 hypothetical protein DCARv2_Chr7 + View
Davidia involucrata Dinv42377 GWHABJS00000013 + View
Durio zibethinus Duzib168G2095 NW_019168159.1 - View
Durio zibethinus Duzib150G0508 NW_019167882.1 - View
Eucalyptus grandis Eucgr.C00824 Chr03 - View
Erythranthe guttata Migut.L01552 scaffold_12 + View
Fragaria x ananassa FAN26G0375 K15176 - RNA polymerase-associated protein CTR9 (CTR9) Fvb1-2 - View
Fragaria x ananassa FAN28G2111 PTHR14027:SF2 - RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 HOMOLOG Fvb1-1 - View
Fragaria x ananassa FAN19G1850 K15176 - RNA polymerase-associated protein CTR9 (CTR9) Fvb1-4 + View
Fragaria x ananassa FAN26G1433 K15176 - RNA polymerase-associated protein CTR9 (CTR9) Fvb1-2 + View
Fragaria vesca FvH4_1g08430 K15176 - RNA polymerase-associated protein CTR9 (CTR9) Fvb1 + View
Gossypium hirsutum Gohir.D07G014500 K15176 - RNA polymerase-associated protein CTR9 (CTR9) D07 + View
Gossypium hirsutum Gohir.A07G014800 K15176 - RNA polymerase-associated protein CTR9 (CTR9) A07 + View
Gossypium raimondii Gorai.001G015300 Chr01 + View
Lotus japonicus Lj6g0005202 K15176 - RNA polymerase-associated protein CTR9 (CTR9) chr6 - View
Lonicera japonica Lj7A685T51 GWHAAZE00000007 + View
Lactuca sativa Lsat_1_v5_gn_5_141221 Lsat_1_v8_lg_5 - View
Magnolia biondii MBI19_g11836_MAGBIO AED:0.30 Chr19 + View
Malus domestica MD15G1215900 binding Chr15 + View
Malus domestica MD02G1088500 binding Chr02 + View
Manihot esculenta Manes.16G096500 Chromosome16 - View
Medicago truncatula Medtr2g041420 TPR repeat nuclear phosphoprotein, putative chr2 + View
Punica granatum PGR142G3183 NC_045128.1 + View
Prunus persica Prupe.7G201100 K15176 - RNA polymerase-associated protein CTR9 (CTR9) Pp07 - View
Populus trichocarpa Potri.006G143300 K15176 - RNA polymerase-associated protein CTR9 (CTR9) Chr06 - View
Phaseolus vulgaris Phvul.009G228100 K15176 - RNA polymerase-associated protein CTR9 (CTR9) Chr09 - View
Quercus lobata QL11p000475 11 + View
Rosa chinensis RcHm_v2.0_Chr2g0094531 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim03G0228800 chr03 - View
Striga asiatica SGA_v2.0_scaffold21G09481 scaffold21 + View
Salix brachista Sabra06G0112200 GWHAAZH00000006 - View
Sechium edule Sed0009854 LG12 - View
Solanum lycopersicum Solyc07g041510.3 RNA polymerase-associated protein CTR9-like protein (AHRD V3.3 *** A0A1J3H2G1_NOCCA) SL4.0ch07 + View
Solanum pennellii Sopen07g021070 Encodes a yeast CTR9 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast CTR9 is a component of a five-member PAF1 complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 (H3-K4) methyl transferase) to the initially transcribed (5) regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin. | EARLY FLOWERING 8 (ELF8) | FUNCTIONS IN: binding | INVOLVED IN: positive regulation of transcription, DNA-dependent, histone methylation, negative regulation of flower development | LOCATED IN: membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 , Tetratricopeptide-like helical , Tetratricopeptide TPR2 , Tetratricopeptide repeat-containing , Tetratricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch07 + View
Trochodendron aralioides TAR383G1047 group10 + View
Theobroma cacao Thecc.09G079000 Binding Chromosome_9 - View
Vaccinium macrocarpon vmacro06329 Similar to VIP6: Protein CTR9 homolog (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01015096001 chr11 - View