Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0019181 PREDICTED: ubiquitin carboxyl-terminal hydrolase 25 [Nicotiana tomentosiformis] Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G1910 LG-7 - View
Actinidia chinensis Actinidia12844 Lachesis_group19 - View
Actinidia chinensis Actinidia04587 Lachesis_group5 + View
Arabidopsis lyrata AL2G38820 scaffold_2 + View
Arabidopsis lyrata AL1G29310 scaffold_1 - View
Avicennia marina MSTRG.6703 ScioBoG_102840_HRSCAF_103099 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.J12N8U K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) arahy.Tifrunner.gnm1.Arahy.18 + View
Arabidopsis thaliana AT1G17110 ubiquitin-specific protease 15 Encodes a ubiquitin-specific protease%2C and its activity has been confirmed in an in vitro assay. ubp15 mutants have defects in cell proliferation%2C and the associated processes of leaf%2C root%2C stem%2C flower%2C and silique development. UBP15 can be found in the nucleus and cytoplasm in transient assays. Though UBP15 is expressed in many tissues%2C UBP15 transcript levels are higher in rosette leaves and inflorescences than in other parts of the plant. ubiquitin-specific protease 15 (UBP15)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C MYND-type (InterPro:IPR002893)%2C Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2%2C conserved site (InterPro:IPR018200)%2C Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 18 (TAIR:AT4G31670.1)%3B Has 7942 Blast hits to 7177 proteins in 265 species: Archae - 0%3B Bacteria - 54%3B Metazoa - 4137%3B Fungi - 1242%3B Plants - 1075%3B Viruses - 7%3B Other Eukaryotes - 1427 (source: NCBI BLink). ubiquitin-specific protease 15 (UBP15)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C MYND-type (InterPro:IPR002893)%2C Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2%2C conserved site (InterPro:IPR018200)%2C Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 18 (TAIR:AT4G31670.1). Chr1 - View
Brassica carinata BcaC07g38831 ChrC07 - View
Brassica carinata BcaC05g25668 ChrC05 + View
Brassica carinata BcaB03g13017 ChrB03 + View
Brassica napus A06p13010 A06 - View
Brassica napus A08p31120 A08 + View
Brassica napus C08p17710 C08 - View
Brassica napus C05p15470 C05 - View
Brassica oleracea BolC5t30256H C5 - View
Brassica oleracea BolC8t49397H C8 - View
Brassica rapa BraA06t24459Z A06 - View
Brassica rapa BraA08t35038Z A08 + View
Capsicum annuum CAN.G375.91 PGAv.1.6.scaffold375 - View
Cannabis sativa CANSAT56G0229 NC_044371.1 + View
Cicer arietinum L. Ca_03395_v3 Ca_LG1_v3 - View
Corylus avellana Haze_08487 Similar to UBP15: Ubiquitin carboxyl-terminal hydrolase 15 (Arabidopsis thaliana OX%3D3702) 4 - View
Cardamine hirsuta CARHR017650 Ubiquitin carboxyl-terminal hydrolase 15 Chr1 - View
Capsella rubella Carub.0001s1684 PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED scaffold_1 - View
Davidia involucrata Dinv26671 GWHABJS00000013 - View
Durio zibethinus Duzib213G1061 NW_019167993.1 - View
Durio zibethinus Duzib268G1504 NW_019168270.1 - View
Erigeron canadensis ECA234G2148 Conyza_canadensis_scaffold:4 + View
Eucalyptus grandis Eucgr.F03211 Chr06 + View
Erythranthe guttata Migut.M00664 scaffold_13 + View
Eutrema salsugineum Thhalv10006749m.g PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED scaffold_5 + View
Fragaria x ananassa FAN16G2595 K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) Fvb3-3 + View
Fragaria x ananassa FAN25G0217 K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) Fvb3-1 + View
Fragaria x ananassa FAN21G2738 3.4.19.12 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase Fvb3-2 + View
Fragaria x ananassa FAN11G0288 K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) Fvb3-4 + View
Gossypium hirsutum Gohir.A01G042100 KOG1865//KOG1873 - Ubiquitin carboxyl-terminal hydrolase // Ubiquitin-specific protease A01 + View
Gossypium hirsutum Gohir.D01G030100 K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) D01 + View
Glycine max Glyma.13G259700 K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) Gm13 - View
Glycine max Glyma.15G248200 K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) Gm15 + View
Gossypium raimondii Gorai.009G358000 Chr09 - View
Gossypium raimondii Gorai.002G039300 Chr02 + View
Helianthus annuus HanXRQChr11g0329981 Probable ubiquitin-specific protease 25 HanXRQChr11 + View
Hydrangea macrophylla Hma1.2p1_0280F.1_g112960 Hma1.2p1_0280F.1 - View
Lupinus albus Lalb_Chr25g0285431 K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) Lalb_Chr25 - View
Lotus japonicus Lj3g0013695 PTHR24006//PTHR24006:SF503 - FAMILY NOT NAMED // TRAF-LIKE FAMILY PROTEIN-RELATED chr3 + View
Lonicera japonica Lj8C142T7 GWHAAZE00000008 + View
Malus domestica MD05G1206800 ubiquitin-specific protease 15 Chr05 - View
Malus domestica MD10G1193900 ubiquitin-specific protease 15 Chr10 - View
Manihot esculenta Manes.03G083600 Chromosome03 - View
Punica granatum PGR083G1694 NC_045133.1 + View
Punica granatum PGR031G3787 NC_045127.1 + View
Populus trichocarpa Potri.011G095200 PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Chr11 - View
Populus trichocarpa Potri.001G378900 PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Chr01 + View
Phaseolus vulgaris Phvul.005G061400 K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) Chr05 - View
Quercus lobata QL04p071243 4 - View
Quercus lobata QL04p070131 4 - View
Rosa chinensis RcHm_v2.0_Chr5g0028031 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim06G0185400 chr06 + View
Salvia bowleyana SalBow8G3600 GWHASIU00000004 - View
Solanum lycopersicum Solyc07g061780.4 Ubiquitin carboxyl-terminal hydrolase 19 (AHRD V3.3 *** A0A1U8EZE1_CAPAN) SL4.0ch07 + View
Schrenkiella parvula Sp1g15230 PTHR24006//PTHR24006:SF503 - FAMILY NOT NAMED // TRAF-LIKE FAMILY PROTEIN-RELATED ch1-1 - View
Schrenkiella parvula Sp5g33540 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED ch5-7 + View
Trochodendron aralioides TAR627G0265 group6 + View
Theobroma cacao Thecc.07G145500 Ubiquitin-specific protease 15 Chromosome_7 - View
Tarenaya hassleriana THA.LOC104813300 ubiquitin carboxyl-terminal hydrolase 15-like NW_010965372.1 + View
Tarenaya hassleriana THA.LOC104813982 ubiquitin carboxyl-terminal hydrolase 15-like NW_010965373.1 + View
Tripterygium wilfordii TWI38G1884 NC_052252.1 - View
Vaccinium macrocarpon vmacro12009 Similar to UBP15: Ubiquitin carboxyl-terminal hydrolase 15 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View