Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr6.3538 | chr6 | - | View | |
Actinidia chinensis | Actinidia30008 | Lachesis_group24 | + | View | |
Arabidopsis lyrata | AL3G41300 | scaffold_3 | + | View | |
Avicennia marina | MSTRG.12750 | ScioBoG_17730_HRSCAF_17811 | - | View | |
Arabidopsis thaliana | AT3G25430 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein%3B FUNCTIONS IN: ribonuclease activity%2C nucleic acid binding%3B INVOLVED IN: RNA modification%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941)%2C Polynucleotidyl transferase%2C ribonuclease H fold (InterPro:IPR012337)%3B BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein (TAIR:AT1G55870.1)%3B Has 339 Blast hits to 335 proteins in 120 species: Archae - 0%3B Bacteria - 10%3B Metazoa - 154%3B Fungi - 41%3B Plants - 69%3B Viruses - 0%3B Other Eukaryotes - 65 (source: NCBI BLink). | Chr3 | + | View |
Brassica carinata | BcaB06g26745 | ChrB06 | + | View | |
Brassica carinata | BcaC06g35812 | ChrC06 | + | View | |
Brassica napus | A07p06960 | A07 | - | View | |
Brassica rapa | BraA07t28486Z | A07 | - | View | |
Beta vulgaris | EL10Ac5g10599 | PTHR15092//PTHR15092:SF28 - POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 // POLY(A)-SPECIFIC RIBONUCLEASE PARN-LIKE | Chr5_EL10_PGA_scaffold2 | - | View |
Cannabis sativa | CANSAT01G3027 | The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon | NC_044373.1 | - | View |
Cicer arietinum L. | Ca_07444_v3 | Ca_LG3_v3 | - | View | |
Corylus avellana | Haze_03569 | Similar to At3g25430: Poly(A)-specific ribonuclease PARN-like (Arabidopsis thaliana OX%3D3702) | 1 | + | View |
Citrus clementina | Ciclev10014999m.g | scaffold_2 | - | View | |
Carpinus fangiana | Cfa010627 | Cfa04 | + | View | |
Cardamine hirsuta | CARHR101730 | Poly(A)-specific ribonuclease PARN-like | Chr3 | + | View |
Carya illinoinensis | CiPaw.13G058600 | K01148 - poly(A)-specific ribonuclease (PARN) | Chr13 | - | View |
Citrullus lanatus | ClCG09G007930 | Poly(A)-specific ribonuclease PARN-like protein | CG_Chr09 | - | View |
Cucumis melo | MELO3C015714.2 | poly(A)-specific ribonuclease PARN-like | chr01 | + | View |
Carica papaya | Cpa.g.sc8.62 | supercontig_8 | - | View | |
Chenopodium quinoa | AUR62008078 | At3g25430: Poly(A)-specific ribonuclease PARN-like | C_Quinoa_Scaffold_3422 | - | View |
Chenopodium quinoa | AUR62028657 | At3g25430: Poly(A)-specific ribonuclease PARN-like | C_Quinoa_Scaffold_1703 | - | View |
Capsella rubella | Carub.0003s2575 | PTHR15092:SF28 - POLY(A)-SPECIFIC RIBONUCLEASE PARN-LIKE | scaffold_3 | + | View |
Daucus carota | DCAR_018616 | hypothetical protein | DCARv2_Chr5 | - | View |
Davidia involucrata | Dinv10447 | GWHABJS00000007 | + | View | |
Durio zibethinus | Duzib211G0603 | NW_019168049.1 | + | View | |
Erigeron canadensis | ECA236G3973 | Conyza_canadensis_scaffold:3 | + | View | |
Erigeron canadensis | ECA236G0853 | Conyza_canadensis_scaffold:3 | - | View | |
Eucalyptus grandis | Eucgr.H00715 | Chr08 | - | View | |
Erythranthe guttata | Migut.N00669 | scaffold_14 | + | View | |
Fragaria x ananassa | FAN24G3199 | PTHR15092:SF28 - POLY(A)-SPECIFIC RIBONUCLEASE PARN-LIKE | Fvb2-2 | + | View |
Fragaria vesca | FvH4_2g17670 | PTHR15092//PTHR15092:SF28 - POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 // POLY(A)-SPECIFIC RIBONUCLEASE PARN-LIKE | Fvb2 | - | View |
Gossypium hirsutum | Gohir.A11G143000 | PTHR15092:SF28 - POLY(A)-SPECIFIC RIBONUCLEASE PARN-LIKE | A11 | + | View |
Gossypium hirsutum | Gohir.D11G149300 | K01148 - poly(A)-specific ribonuclease (PARN) | D11 | + | View |
Glycine max | Glyma.08G343300 | PTHR15092:SF28 - POLY(A)-SPECIFIC RIBONUCLEASE PARN-LIKE | Gm08 | - | View |
Gossypium raimondii | Gorai.007G160100 | Chr07 | + | View | |
Hydrangea macrophylla | Hma1.2p1_0161F.1_g071450 | Hma1.2p1_0161F.1 | + | View | |
Lupinus albus | Lalb_Chr19g0126201 | PTHR15092//PTHR15092:SF28 - POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 // POLY(A)-SPECIFIC RIBONUCLEASE PARN-LIKE | Lalb_Chr19 | + | View |
Lotus japonicus | Lj1g0019212 | PTHR15092//PTHR15092:SF28 - POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 // POLY(A)-SPECIFIC RIBONUCLEASE PARN-LIKE | chr1 | - | View |
Lonicera japonica | Lj2C1115T12 | GWHAAZE00000002 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_8_97601 | Lsat_1_v8_lg_8 | + | View | |
Malus domestica | MD05G1157500 | Polynucleotidyl transferase | Chr05 | - | View |
Malus domestica | MD10G1150600 | Polynucleotidyl transferase | Chr10 | - | View |
Manihot esculenta | Manes.13G055100 | Chromosome13 | + | View | |
Medicago truncatula | Medtr7g051320 | Nodule Cysteine-Rich (NCR) secreted peptide | chr7 | - | View |
Nicotiana tabacum | Nitab4.5_0000038g0310 | Ribonuclease H-like domain, Ribonuclease CAF1 | Nitab4.5_0000038 | - | View |
Olea europaea | Oeu057820.1 | chr22 | - | View | |
Petunia axillaris | Peaxi162Scf00672g00211 | Poly(A)-specific ribonuclease PARN-like | Peaxi162Scf00672 | - | View |
Punica granatum | PGR083G2426 | NC_045133.1 | - | View | |
Prunus persica | Prupe.8G189300 | Pp08 | - | View | |
Pisum sativum | Psat3g151640 | CAF1 family ribonuclease | chr3LG5 | + | View |
Populus trichocarpa | Potri.014G177400 | K01148 - poly(A)-specific ribonuclease (PARN) | Chr14 | - | View |
Phaseolus vulgaris | Phvul.008G135000 | PTHR15092:SF28 - POLY(A)-SPECIFIC RIBONUCLEASE PARN-LIKE | Chr08 | + | View |
Quercus lobata | QL09p046994 | 9 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr6g0282651 | RcHm_v2.0_Chr6 | - | View | |
Rhododendron simsii | Rhsim13G0053300 | chr13 | + | View | |
Striga asiatica | SGA_v2.0_scaffold77G25302 | scaffold77 | + | View | |
Salix brachista | Sabra14G0135700 | GWHAAZH00000014 | - | View | |
Simmondsia chinensis | Sc05g0001690 | GWHAASQ00000005 | - | View | |
Solanum lycopersicum | Solyc09g055920.4 | Poly(A)-specific ribonuclease PARN-like (AHRD V3.3 *** A0A2G3BM43_CAPCH) | SL4.0ch09 | - | View |
Schrenkiella parvula | Sp3g22970 | PTHR15092//PTHR15092:SF28 - POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 // POLY(A)-SPECIFIC RIBONUCLEASE PARN-LIKE | ch3-2 | + | View |
Solanum pennellii | Sopen09g021770 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | FUNCTIONS IN: ribonuclease activity, nucleic acid binding | INVOLVED IN: RNA modification | LOCATED IN: nucleus | CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 , Polynucleotidyl transferase, ribonuclease H fold | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein | Spenn-ch09 | - | View |
Selenicereus undatus | Hund02801 | Scaffold_33678 | + | View | |
Trochodendron aralioides | TAR633G0525 | group2 | + | View | |
Theobroma cacao | Thecc.01G210100 | Polynucleotidyl transferase | Chromosome_1 | - | View |
Trifolium pratense | TPR.G26836 | Tp57577_TGAC_v2_LG5 | - | View | |
Tripterygium wilfordii | TWI18G1201 | NC_052241.1 | + | View | |
Vaccinium macrocarpon | vmacro02823 | Similar to At3g25430: Poly(A)-specific ribonuclease PARN-like (Arabidopsis thaliana OX%3D3702) | chr9_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vigna mungo | VMungo1383G0073 | CM024070.1 | - | View |