Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0016071 PREDICTED: U-box domain-containing protein 45 [Vitis vinifera] Chr6 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr11.2292 chr11 - View
Actinidia chinensis Actinidia20696 Lachesis_group12 - View
Actinidia chinensis Actinidia30664 Lachesis_group10 + View
Actinidia chinensis Actinidia08080 Lachesis_group15 - View
Arabidopsis lyrata AL1G40590 scaffold_1 - View
Arabidopsis lyrata AL2G26200 scaffold_2 + View
Avicennia marina MSTRG.518 ScioBoG_102831_HRSCAF_103044 + View
Aquilegia oxysepala Aqoxy3G01497 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MGPQ7U PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TJ94V4 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED arahy.Tifrunner.gnm1.Arahy.20 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KW6ZZA PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AS1G8G PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED arahy.Tifrunner.gnm1.Arahy.10 + View
Arabidopsis thaliana AT1G67530 ARM repeat superfamily protein ARM repeat superfamily protein%3B FUNCTIONS IN: ubiquitin-protein ligase activity%2C binding%3B INVOLVED IN: protein ubiquitination%3B LOCATED IN: ubiquitin ligase complex%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo (InterPro:IPR000225)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G24330.1)%3B Has 3478 Blast hits to 3233 proteins in 245 species: Archae - 0%3B Bacteria - 16%3B Metazoa - 777%3B Fungi - 226%3B Plants - 2201%3B Viruses - 3%3B Other Eukaryotes - 255 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G24330 ARM repeat superfamily protein ARM repeat superfamily protein%3B FUNCTIONS IN: ubiquitin-protein ligase activity%2C binding%3B INVOLVED IN: protein ubiquitination%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo (InterPro:IPR000225)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G67530.2)%3B Has 3064 Blast hits to 2955 proteins in 242 species: Archae - 0%3B Bacteria - 60%3B Metazoa - 394%3B Fungi - 149%3B Plants - 2167%3B Viruses - 3%3B Other Eukaryotes - 291 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB05g24292 ChrB05 + View
Brassica napus C02p23100 C02 + View
Brassica rapa BraA07t28992Z A07 + View
Beta vulgaris EL10Ac6g13471 PF04564//PF05804 - U-box domain (U-box) // Kinesin-associated protein (KAP) (KAP) Chr6_EL10_PGA_scaffold0 - View
Cicer arietinum L. Ca_18057_v3 Ca_LG6_v3 + View
Cicer arietinum L. Ca_16475_v3 Ca_LG5_v3 + View
Corylus avellana Haze_12384 Similar to PUB6: U-box domain-containing protein 6 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc11_g16760 U-box domain-containing protein 6 chr11 - View
Citrus clementina Ciclev10030762m.g scaffold_4 + View
Carpinus fangiana Cfa009338 Cfa03 + View
Cardamine hirsuta CARHR060100 U-box domain-containing protein Chr2 + View
Carya illinoinensis CiPaw.06G100700 PTHR22849//PTHR22849:SF8 - WDSAM1 PROTEIN // U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Chr06 - View
Carya illinoinensis CiPaw.05G112800 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Chr05 + View
Citrullus lanatus ClCG11G013820 U-box domain-containing family protein CG_Chr11 + View
Cucumis melo MELO3C010737.2 RING-type E3 ubiquitin transferase chr03 + View
Cucumis melo MELO3C011882.2 RING-type E3 ubiquitin transferase chr10 - View
Carica papaya Cpa.g.sc43.25 supercontig_43 + View
Chenopodium quinoa AUR62005592 PUB45: U-box domain-containing protein 45 C_Quinoa_Scaffold_1214 - View
Chenopodium quinoa AUR62024136 PUB45: U-box domain-containing protein 45 C_Quinoa_Scaffold_4119 + View
Capsella rubella Carub.0002s1387 scaffold_2 + View
Cucumis sativus L. CsaV3_5G030420 RING-type E3 ubiquitin transferase chr5 + View
Daucus carota DCAR_031189 hypothetical protein DCARv2_Chr9 - View
Daucus carota DCAR_007009 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv10976 GWHABJS00000008 - View
Davidia involucrata Dinv14815 GWHABJS00000018 + View
Durio zibethinus Duzib268G1146 NW_019168270.1 - View
Durio zibethinus Duzib251G0532 NW_019167971.1 - View
Durio zibethinus Duzib248G0598 NW_019168048.1 + View
Erigeron canadensis ECA246G4510 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.H04656 Chr08 + View
Erythranthe guttata Migut.K00710 scaffold_11 - View
Eutrema salsugineum Thhalv10018154m.g PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED scaffold_9 - View
Fragaria x ananassa FAN17G1759 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Fvb4-2 - View
Fragaria x ananassa FAN07G0176 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Fvb4-4 - View
Fragaria x ananassa FAN22G2371 PTHR22849//PTHR22849:SF8 - WDSAM1 PROTEIN // U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Fvb4-1 + View
Fragaria vesca FvH4_4g24030 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Fvb4 + View
Gossypium hirsutum Gohir.D01G148900 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED D01 - View
Gossypium hirsutum Gohir.A05G311000 PF04564//PF04826 - U-box domain (U-box) // Armadillo-like (Arm_2) A05 + View
Gossypium hirsutum Gohir.A03G127500 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED A03 + View
Gossypium hirsutum Gohir.D02G151000 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED D02 + View
Glycine max Glyma.05G146300 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Gm05 - View
Glycine max Glyma.18G008300 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Gm18 + View
Glycine max Glyma.08G103100 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Gm08 - View
Glycine max Glyma.11G249000 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Gm11 - View
Gossypium raimondii Gorai.002G184700 Chr02 - View
Gossypium raimondii Gorai.005G169300 Chr05 + View
Helianthus annuus HanXRQChr08g0207551 Probable plant U-box 45 HanXRQChr08 - View
Hydrangea macrophylla Hma1.2p1_0275F.1_g110920 Hma1.2p1_0275F.1 + View
Lupinus albus Lalb_Chr07g0187371 PTHR22849//PTHR22849:SF8 - WDSAM1 PROTEIN // U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Lalb_Chr07 - View
Lupinus albus Lalb_Chr13g0294211 PTHR22849//PTHR22849:SF8 - WDSAM1 PROTEIN // U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Lalb_Chr13 - View
Lotus japonicus Lj4g0011905 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED chr4 + View
Lotus japonicus Lj6g0027121 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED chr6 - View
Lonicera japonica Lj6A824G75 GWHAAZE00000006 - View
Lonicera japonica Lj3A1066G67 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_3_29721 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Lsat_1_v8_lg_3 - View
Lactuca sativa Lsat_1_v5_gn_8_149900 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Lsat_1_v8_lg_8 + View
Malus domestica MD16G1116600 ARM repeat superfamily protein Chr16 - View
Manihot esculenta Manes.12G013600 Chromosome12 + View
Manihot esculenta Manes.13G017600 Chromosome13 + View
Medicago truncatula Medtr8g080280 plant U-box protein chr8 - View
Medicago truncatula Medtr3g085610 plant U-box protein chr3 + View
Nelumbo nucifera Nn4g22376 chr4 + View
Nelumbo nucifera Nn3g16515 chr3 + View
Nicotiana tabacum Nitab4.5_0000581g0050 Zinc finger, RING/FYVE/PHD-type, U box domain, Armadillo-like helical, Armadillo-type fold, Armadillo Nitab4.5_0000581 - View
Olea europaea Oeu020303.1 chr8 + View
Oryza sativa ssp. japonica Os04g0489800 Zinc finger, RING/FYVE/PHD-type domain containing protein. chr04 + View
Petunia axillaris Peaxi162Scf00128g01043 U-box domain-containing protein 45 Peaxi162Scf00128 - View
Punica granatum PGR119G1537 NC_045132.1 - View
Prunus persica Prupe.1G229500 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Pp01 + View
Pisum sativum Psat7g078440 U-box domain chr7LG7 + View
Papaver somniferum PSO782G5087 NC_039365.1 - View
Papaver somniferum PSO063G1827 NC_039364.1 + View
Papaver somniferum PSO017G0064 NC_039362.1 - View
Populus trichocarpa Potri.008G177100 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Chr08 + View
Populus trichocarpa Potri.010G058000 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Chr10 - View
Phaseolus vulgaris Phvul.001G260300 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Chr01 - View
Phaseolus vulgaris Phvul.002G175000 PTHR22849:SF8 - U-BOX DOMAIN-CONTAINING PROTEIN 45-RELATED Chr02 + View
Quercus lobata QL03p054277 3 + View
Rosa chinensis RcHm_v2.0_Chr4g0430741 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim12G0102500 chr12 + View
Rhododendron simsii Rhsim12G0028600 chr12 + View
Striga asiatica SGA_v2.0_scaffold9G04764 scaffold9 + View
Salvia bowleyana SalBow2G2041 GWHASIU00000007 - View
Salix brachista Sabra08G0135100 GWHAAZH00000008 + View
Salix brachista Sabra10G0047400 GWHAAZH00000010 + View
Simmondsia chinensis Sc04g0010020 GWHAASQ00000004 - View
Simmondsia chinensis Sc11g0000550 GWHAASQ00000011 + View
Simmondsia chinensis Sc14g0009010 GWHAASQ00000014 - View
Sechium edule Sed0010046 LG04 - View
Sechium edule Sed0019604 LG06 - View
Sechium edule Sed0000503 LG03 + View
Sapria himalayana SHI17950 scaffold23_8152026 - View
Solanum lycopersicum Solyc05g015070.4 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2VMV0_CAPBA) SL4.0ch05 - View
Schrenkiella parvula Sp5g22540 PF04564//PF05804 - U-box domain (U-box) // Kinesin-associated protein (KAP) (KAP) ch5-6 + View
Solanum pennellii Sopen05g010300 Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. | plant U-box 45 (PUB45) | FUNCTIONS IN: ubiquitin-protein ligase activity | INVOLVED IN: protein ubiquitination | LOCATED IN: ubiquitin ligase complex | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: U box domain , Armadillo-like helical , Armadillo , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein Spenn-ch05 - View
Selenicereus undatus Hund06077 Scaffold_19641 - View
Selenicereus undatus Hund25448 Scaffold_3410 - View
Trochodendron aralioides TAR374G0771 group12 - View
Trochodendron aralioides TAR629G0638 group0 + View
Trochodendron aralioides TAR371G1279 group13 - View
Theobroma cacao Thecc.02G276600 ARM repeat superfamily protein Chromosome_2 - View
Trifolium pratense TPR.G17066 Tp57577_TGAC_v2_LG3 + View
Trifolium pratense TPR.G21800 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI36G1128 NC_052237.1 - View
Tripterygium wilfordii TWI18G0125 NC_052241.1 - View
Vaccinium macrocarpon vmacro01075 Similar to PUB6: U-box domain-containing protein 6 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G0024 CM024069.1 - View
Vigna mungo VMungo1383G1322 CM024070.1 - View
Vitis vinifera GSVIVG01010374001 chr1 - View