Home
Dicots PLAZA 5.0
Data
Data
Overview
Query builder
Files
Download
Analyze
Gene Families
Expansion plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/Interpro description
Gene family
Login
Account
Profile settings
Password
API key
Logout
CSS0038215
Gene toolbox
View
Sequences
BLAST Hits
Orthologs
Colinear Genes Pairs
Genome Browser
Homology related tools
Local Gene Organization
Multiple Sequence Alignment
Phylogenetic Tree
Similarity Heatmap
Create
Custom Phylogenetic Tree
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism
Gene id
Description
Chromosome
Strand
Multiplicon
Aethionema arabicum
Aa31LG1G27910
LG-1
-
View
Acer truncatum
Atru.chr5.686
chr5
-
View
Arabidopsis lyrata
AL4G45970
scaffold_4
-
View
Avicennia marina
MSTRG.17355
ScioBoG_19743_HRSCAF_19834
-
View
Amaranthus hybridus
Ah.05g179400
AmaHy_arrow1_Scaffold_5
+
View
Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PH1UFL
arahy.Tifrunner.gnm1.Arahy.06
+
View
Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4N8QKH
arahy.Tifrunner.gnm1.Arahy.16
-
View
Arabidopsis thaliana
AT2G46540
fiber unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%2C membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 16 growth stages%3B Has 42 Blast hits to 42 proteins in 11 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 42%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
Chr2
-
View
Amborella trichopoda
ATR0602G127
AmTr_v1.0_scaffold00021
+
View
Brassica carinata
BcaC02g07016
ChrC02
-
View
Brassica carinata
BcaC02g12671
ChrC02
-
View
Brassica napus
C04p01380
C04
+
View
Brassica napus
A04p34450
A04
-
View
Brassica oleracea
BolC4t28709H
C4
-
View
Brassica rapa
BraA05t19124Z
A05
+
View
Brassica rapa
BraA04t18903Z
A04
-
View
Beta vulgaris
EL10Ac1g00247
Chr1_EL10_PGA_scaffold3
+
View
Capsicum annuum
CAN.G1415.20
PGAv.1.6.scaffold1415
+
View
Cicer arietinum L.
Ca_09518_v3
Ca_LG3_v3
-
View
Coffea canephora
Cc02_g39560
unknown protein; FUNCTIONS IN
chr2
-
View
Citrus clementina
Ciclev10023834m.g
scaffold_3
+
View
Cardamine hirsuta
CARHR141880
Fiber protein fb11
Chr4
-
View
Carya illinoinensis
CiPaw.01G077600
Chr01
-
View
Corchorus olitorius
COL.COLO4_06226
hypothetical protein
AWUE01012655.1
-
View
Chenopodium quinoa
AUR62004508
Protein of unknown function
C_Quinoa_Scaffold_4250
-
View
Capsella rubella
Carub.0004s2926
scaffold_4
-
View
Daucus carota
DCAR_025264
hypothetical protein
DCARv2_Chr7
-
View
Daucus carota
DCAR_005402
hypothetical protein
DCARv2_Chr2
-
View
Durio zibethinus
Duzib133G0073
NW_019167938.1
-
View
Durio zibethinus
Duzib138G0325
NW_019167893.1
-
View
Erythranthe guttata
Migut.N01534
scaffold_14
+
View
Eutrema salsugineum
Thhalv10001742m.g
scaffold_22
-
View
Gossypium hirsutum
Gohir.D12G116700
D12
-
View
Gossypium hirsutum
Gohir.D11G102600
D11
-
View
Gossypium hirsutum
Gohir.A11G097900
A11
-
View
Gossypium hirsutum
Gohir.A12G113200
A12
-
View
Glycine max
Glyma.03G258500
Gm03
-
View
Glycine max
Glyma.19G257100
Gm19
-
View
Gossypium raimondii
Gorai.007G109700
Chr07
-
View
Gossypium raimondii
Gorai.008G126400
Chr08
-
View
Lupinus albus
Lalb_Chr18g0044541
Lalb_Chr18
+
View
Lupinus albus
Lalb_Chr15g0076341
Lalb_Chr15
-
View
Lotus japonicus
Lj1g0009143
chr1
+
View
Lonicera japonica
Lj7E499T0
GWHAAZE00000007
-
View
Malus domestica
MD01G1083600
Protein of unknown function
Chr01
-
View
Malus domestica
MD07G1152300
Protein of unknown function
Chr07
-
View
Manihot esculenta
Manes.01G244801
Chromosome01
+
View
Manihot esculenta
Manes.05G021500
Chromosome05
+
View
Medicago truncatula
Medtr7g117700
fiber protein Fb11
chr7
-
View
Nelumbo nucifera
Nn3g18955
chr3
+
View
Nicotiana tabacum
Nitab4.5_0000258g0270
Unknown
Nitab4.5_0000258
-
View
Olea europaea
Oeu008708.1
chr3
-
View
Petunia axillaris
Peaxi162Scf00345g00122
Unknown protein
Peaxi162Scf00345
+
View
Prunus persica
Prupe.2G190600
Pp02
-
View
Pisum sativum
Psat3g001880
Unknown gene
chr3LG5
+
View
Populus trichocarpa
Potri.014G100250
Chr14
-
View
Populus trichocarpa
Potri.002G173101
Chr02
-
View
Phaseolus vulgaris
Phvul.006G114500
Chr06
-
View
Rhododendron simsii
Rhsim01G0174400
chr01
-
View
Striga asiatica
SGA_v2.0_scaffold232G43548
scaffold232
+
View
Salix brachista
Sabra02G0140200
GWHAAZH00000002
+
View
Simmondsia chinensis
Sc01g0002550
GWHAASQ00000001
+
View
Solanum lycopersicum
Solyc01g096090.4
Fiber protein Fb11 (AHRD V3.3 *** B6SNA3_MAIZE)
SL4.0ch01
-
View
Schrenkiella parvula
Sp4g28590
ch4-6
-
View
Solanum pennellii
Sopen01g039810
unknown protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: mitochondrion, membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 16 growth stages
Spenn-ch01
-
View
Solanum tuberosum
PGSC0003DMG400000233
Fiber protein Fb11
ST4.03ch01
-
View
Selenicereus undatus
Hund27188
Scaffold_2055
+
View
Selenicereus undatus
Hund16719
Scaffold_33675
-
View
Trochodendron aralioides
TAR374G1528
group12
-
View
Trochodendron aralioides
TAR375G0162
group15
-
View
Theobroma cacao
Thecc.01G340400
Uncharacterized protein
Chromosome_1
+
View
Tarenaya hassleriana
THA.LOC104802081
uncharacterized protein LOC104802081
NW_010970490.1
-
View
Tarenaya hassleriana
THA.LOC104817372
uncharacterized protein LOC104817372
NW_010965946.1
-
View
Tripterygium wilfordii
TWI59G0786
NC_052248.1
+
View
Vaccinium macrocarpon
vmacro13170
Protein of unknown function
chr7_Vaccinium_macrocarpon_Stevens_v1
-
View
Vitis vinifera
GSVIVG01027169001
chr15
+
View