Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0021591 hypothetical protein POPTR_0014s09150g [Populus trichocarpa] Chr3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G7010 LG-6 + View
Acer truncatum Atru.chr9.2031 chr9 - View
Actinidia chinensis Actinidia01393 Lachesis_group23 - View
Arabidopsis lyrata AL7G29560 scaffold_7 - View
Arabidopsis lyrata AL6G45240 scaffold_6 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.84F6DM PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.K40LPB PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT4G11090 TRICHOME BIREFRINGENCE-LIKE 23 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members%2C two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose%2C presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff %26 Wolf Scheible%2C 2010%2C personal communication). TRICHOME BIREFRINGENCE-LIKE 23 (TBL23)%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231%2C plant (InterPro:IPR004253)%3B BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 24 (TAIR:AT4G23790.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT4G23790 TRICHOME BIREFRINGENCE-LIKE 24 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members%2C two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose%2C presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff %26 Wolf Scheible%2C 2010%2C personal communication). TRICHOME BIREFRINGENCE-LIKE 24 (TBL24)%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231%2C plant (InterPro:IPR004253)%3B BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 23 (TAIR:AT4G11090.1)%3B Has 1329 Blast hits to 1312 proteins in 31 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 1325%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaB01g01585 ChrB01 - View
Brassica napus A09p28150 A09 + View
Brassica napus C07p53120 C07 + View
Brassica napus A03p54760 A03 + View
Brassica napus C09p35680 C09 + View
Brassica oleracea BolC9t56404H C9 + View
Brassica rapa BraA09t38378Z A09 + View
Brassica rapa BraA03t14543Z A03 + View
Beta vulgaris EL10Ac5g12891 PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED Chr5_EL10_PGA_scaffold2 + View
Beta vulgaris EL10Ac1g00304 PTHR32285:SF9 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Chr1_EL10_PGA_scaffold3 - View
Cannabis sativa CANSAT21G2317 NC_044374.1 + View
Cicer arietinum L. Ca_17493_v3 Ca_LG6_v3 - View
Corylus avellana Haze_15629 Similar to TBL25: Protein trichome birefringence-like 25 (Arabidopsis thaliana OX%3D3702) 11 + View
Corylus avellana Haze_08655 Similar to TBL23: Protein trichome birefringence-like 23 (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc08_g15810 TRICHOME BIREFRINGENCE-LIKE 23 chr8 + View
Coffea canephora Cc02_g39080 TRICHOME BIREFRINGENCE-LIKE 25 chr2 + View
Citrus clementina Ciclev10020137m.g scaffold_3 - View
Citrus clementina Ciclev10020140m.g scaffold_3 - View
Carpinus fangiana Cfa003826 Cfa01 - View
Cardamine hirsuta CARHR255510 TRICHOME BIREFRINGENCE-LIKE 23 Chr8 + View
Cardamine hirsuta CARHR231180 Protein trichome birefringence-like 24 Chr7 + View
Carya illinoinensis CiPaw.11G123600 PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED Chr11 - View
Carya illinoinensis CiPaw.12G084700 PTHR32285//PTHR32285:SF40 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED Chr12 - View
Carya illinoinensis CiPaw.02G039300 PTHR32285//PTHR32285:SF9 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Chr02 + View
Citrullus lanatus ClCG01G002010 TRICHOME BIREFRINGENCE-LIKE 23 LENGTH=432 CG_Chr01 - View
Cucumis melo MELO3C005739.2 Protein trichome birefringence-like 25 chr09 + View
Capsella rubella Carub.0006s2986 PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED scaffold_6 - View
Cucumis sativus L. CsaV3_5G002140 Trichome birefringence-like family chr5 - View
Daucus carota DCAR_008541 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv38854 GWHABJS00000003 - View
Davidia involucrata Dinv43900 GWHABJS00000016 + View
Durio zibethinus Duzib084G0538 NW_019167827.1 + View
Durio zibethinus Duzib138G1595 NW_019167893.1 + View
Erigeron canadensis ECA246G2692 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.E00070 Chr05 - View
Erythranthe guttata Migut.A00677 scaffold_1 - View
Eutrema salsugineum Thhalv10025256m.g PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED scaffold_1 - View
Eutrema salsugineum Thhalv10028674m.g PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED scaffold_3 + View
Fragaria x ananassa FAN10G2905 PTHR32285//PTHR32285:SF9 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Fvb7-1 + View
Fragaria x ananassa FAN08G2686 PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED Fvb5-3 - View
Fragaria x ananassa FAN03G1862 PTHR32285//PTHR32285:SF9 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Fvb7-3 - View
Fragaria x ananassa FAN06G2279 PTHR32285//PTHR32285:SF9 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Fvb7-2 + View
Fragaria x ananassa FAN10G3763 PTHR32285//PTHR32285:SF9 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Fvb7-1 + View
Fragaria x ananassa FAN13G1202 PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED Fvb5-2 + View
Fragaria x ananassa FAN18G2250 PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED Fvb5-1 + View
Fragaria x ananassa FAN06G0222 PTHR32285//PTHR32285:SF9 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Fvb7-2 + View
Fragaria vesca FvH4_5g04110 PTHR32285//PTHR32285:SF40 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED Fvb5 + View
Fragaria vesca FvH4_7g16070 PTHR32285:SF9 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Fvb7 + View
Gossypium hirsutum Gohir.A02G102101 PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED A02 - View
Gossypium hirsutum Gohir.D08G132100 PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED D08 - View
Gossypium hirsutum Gohir.D03G082100 PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED D03 + View
Glycine max Glyma.08G021500 PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED Gm08 + View
Glycine max Glyma.03G256400 PTHR32285:SF9 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Gm03 + View
Glycine max Glyma.05G215300 PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED Gm05 + View
Glycine max Glyma.16G026600 PTHR32285:SF9 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Gm16 - View
Glycine max Glyma.07G057600 PTHR32285:SF9 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Gm07 - View
Gossypium raimondii Gorai.003G081500 Chr03 - View
Gossypium raimondii Gorai.004G135000 Chr04 - View
Lupinus albus Lalb_Chr05g0224231 PTHR32285//PTHR32285:SF40 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED Lalb_Chr05 - View
Lupinus albus Lalb_Chr16g0390561 PTHR32285//PTHR32285:SF40 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED Lalb_Chr16 + View
Lotus japonicus Lj4g0027038 PTHR32285//PTHR32285:SF40 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED chr4 - View
Lonicera japonica Lj8C210G14 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_3_10220 Lsat_1_v8_lg_3 + View
Magnolia biondii MBI06_g32755_MAGBIO AED:0.04 Chr06 - View
Malus domestica MD07G1146500 TRICHOME BIREFRINGENCE-LIKE 25 Chr07 + View
Manihot esculenta Manes.05G025200 Chromosome05 - View
Manihot esculenta Manes.01G248000 Chromosome01 - View
Manihot esculenta Manes.02G012200 Chromosome02 - View
Medicago truncatula Medtr8g099300 trichome birefringence-like protein chr8 + View
Prunus persica Prupe.5G115700 Pp05 + View
Prunus persica Prupe.2G184500 PTHR32285:SF9 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Pp02 + View
Populus trichocarpa Potri.003G137800 PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED Chr03 + View
Populus trichocarpa Potri.001G093800 PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED Chr01 - View
Populus trichocarpa Potri.002G168400 PTHR32285:SF9 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Chr02 + View
Populus trichocarpa Potri.014G095800 PTHR32285:SF9 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Chr14 + View
Phaseolus vulgaris Phvul.002G296400 PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED Chr02 + View
Phaseolus vulgaris Phvul.010G111700 PTHR32285:SF9 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Chr10 + View
Rosa chinensis RcHm_v2.0_Chr7g0195391 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim07G0083600 chr07 - View
Rhododendron simsii Rhsim07G0006100 chr07 - View
Striga asiatica SGA_v2.0_scaffold173G39088 scaffold173 - View
Salvia bowleyana SalBow1G2132 GWHASIU00000001 + View
Salix brachista Sabra01G0069700 GWHAAZH00000001 - View
Salix brachista Sabra03G0099200 GWHAAZH00000003 + View
Simmondsia chinensis Sc01g0010150 GWHAASQ00000001 + View
Solanum lycopersicum Solyc08g082060.3 Protein trichome birefringence-like 25 (AHRD V3.3 *** A0A2G3DB46_CAPCH) SL4.0ch08 + View
Solanum lycopersicum Solyc01g095610.4 Protein trichome birefringence-like 25 (AHRD V3.3 *** A0A2G2W6P1_CAPBA) SL4.0ch01 + View
Solanum pennellii Sopen10g005400 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff, Wolf Scheible, 2010, personal communication). | TRICHOME BIREFRINGENCE-LIKE 25 (TBL25) | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant | BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 26 Spenn-ch10 - View
Solanum pennellii Sopen01g039360 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff, Wolf Scheible, 2010, personal communication). | TRICHOME BIREFRINGENCE-LIKE 25 (TBL25) | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant | BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 26 Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG402000097 Conserved gene of unknown function ST4.03ch01 + View
Solanum tuberosum PGSC0003DMG400012299 Conserved gene of unknown function ST4.03ch08 + View
Selenicereus undatus Hund14234 Scaffold_33677 - View
Selenicereus undatus Hund27217 Scaffold_2055 - View
Trochodendron aralioides TAR636G0983 group1 - View
Trochodendron aralioides TAR629G0166 group0 + View
Theobroma cacao Thecc.03G293600 Trichome birefringence-like 23 Chromosome_3 + View
Theobroma cacao Thecc.01G346000 Trichome birefringence-like 25 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104814954 protein trichome birefringence-like 23 NW_010960187.1 + View
Vaccinium macrocarpon vmacro11444 Similar to TBL23: Protein trichome birefringence-like 23 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro13909 Similar to TBL23: Protein trichome birefringence-like 23 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G0565 CM024069.1 + View
Vitis vinifera GSVIVG01027060001 chr15 - View