Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0000791 PREDICTED: probable rhamnose biosynthetic enzyme 1 [Nelumbo nucifera] Contig440 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G2000 LG-8 + View
Acer truncatum Atru.chr2.1961 chr2 + View
Arabidopsis lyrata AL3G27100 scaffold_3 + View
Amaranthus hybridus Ah.04g163970 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 (Protein REPRESSOR OF LRX1 1) (Rhamnose biosynthetic enzyme 1) (AtRHM1) [Includes: UDP-glucose 4,6-dehydratase (EC 4.2.1.76) AmaHy_arrow1_Scaffold_4 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CEWT6L K12450 - UDP-glucose 4,6-dehydratase (RHM) arahy.Tifrunner.gnm1.Arahy.07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PFN41B K12450 - UDP-glucose 4,6-dehydratase (RHM) arahy.Tifrunner.gnm1.Arahy.07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.79XKZD K12450 - UDP-glucose 4,6-dehydratase (RHM) arahy.Tifrunner.gnm1.Arahy.18 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NE0GCA K12450 - UDP-glucose 4,6-dehydratase (RHM) arahy.Tifrunner.gnm1.Arahy.17 - View
Arabidopsis thaliana AT3G14790 rhamnose biosynthesis 3 rhamnose biosynthesis 3 (RHM3)%3B CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509)%2C NAD(P)-binding domain (InterPro:IPR016040)%2C dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913)%3B BEST Arabidopsis thaliana protein match is: NAD-dependent epimerase/dehydratase family protein (TAIR:AT1G53500.1)%3B Has 53605 Blast hits to 53390 proteins in 3033 species: Archae - 947%3B Bacteria - 30692%3B Metazoa - 1095%3B Fungi - 569%3B Plants - 1514%3B Viruses - 102%3B Other Eukaryotes - 18686 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaB06g25356 ChrB06 - View
Brassica carinata BcaC05g29036 ChrC05 - View
Brassica napus A05p34680 A05 - View
Brassica napus A01p39040 A01 - View
Brassica napus C05p52470 C05 - View
Brassica napus C01p49660 C01 - View
Brassica oleracea BolC1t04922H C1 - View
Brassica oleracea BolC5t33931H C5 - View
Brassica rapa BraA05t22284Z A05 - View
Brassica rapa BraA01t03951Z A01 - View
Beta vulgaris EL10Ac4g08424 4.2.1.76 - UDP-glucose 4,6-dehydratase Chr4_EL10_PGA_scaffold1 - View
Capsicum annuum CAN.G375.53 PGAv.1.6.scaffold375 - View
Cannabis sativa CANSAT56G0890 NC_044371.1 + View
Cicer arietinum L. Ca_03919_v3 Ca_LG1_v3 + View
Corylus avellana Haze_13484 Similar to RHM1: Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 (Arabidopsis thaliana OX%3D3702) 5 - View
Coffea canephora Cc05_g10660 Probable rhamnose biosynthetic enzyme 1 chr5 + View
Coffea canephora Cc05_g09270 Probable rhamnose biosynthetic enzyme 1 chr5 - View
Citrus clementina Ciclev10019182m.g scaffold_3 + View
Cardamine hirsuta CARHR089730 Dtdp-glucose 4,6-dehydratase, putative Chr3 + View
Carya illinoinensis CiPaw.11G156400 K12450 - UDP-glucose 4,6-dehydratase (RHM) Chr11 - View
Chenopodium quinoa AUR62013952 RHM1: Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 C_Quinoa_Scaffold_3035 + View
Capsella rubella Carub.0003s1446 K12450 - UDP-glucose 4,6-dehydratase (RHM) scaffold_3 + View
Davidia involucrata Dinv26704 GWHABJS00000013 - View
Durio zibethinus Duzib213G0076 The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon NW_019167993.1 - View
Erigeron canadensis ECA236G1076 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.F01369 Chr06 - View
Erythranthe guttata Migut.M00690 scaffold_13 + View
Erythranthe guttata Migut.H02027 scaffold_8 - View
Eutrema salsugineum Thhalv10020227m.g K12450 - UDP-glucose 4,6-dehydratase (RHM) scaffold_13 - View
Fragaria x ananassa FAN11G2275 K12450 - UDP-glucose 4,6-dehydratase (RHM) Fvb3-4 - View
Fragaria x ananassa FAN21G3219 K12450 - UDP-glucose 4,6-dehydratase (RHM) Fvb3-2 + View
Fragaria x ananassa FAN25G1070 K12450 - UDP-glucose 4,6-dehydratase (RHM) Fvb3-1 - View
Fragaria x ananassa FAN16G3609 K12450 - UDP-glucose 4,6-dehydratase (RHM) Fvb3-3 + View
Fragaria vesca FvH4_3g17640 K12450 - UDP-glucose 4,6-dehydratase (RHM) Fvb3 + View
Gossypium hirsutum Gohir.D11G302800 K12450 - UDP-glucose 4,6-dehydratase (RHM) D11 - View
Gossypium hirsutum Gohir.D01G037750 PTHR10366:SF385 - RHAMNOSE BIOSYNTHETIC ENZYME 1-RELATED D01 + View
Gossypium hirsutum Gohir.A04G044900 K12450 - UDP-glucose 4,6-dehydratase (RHM) A04 - View
Gossypium hirsutum Gohir.A11G289600 K12450 - UDP-glucose 4,6-dehydratase (RHM) A11 + View
Glycine max Glyma.18G106300 K12450 - UDP-glucose 4,6-dehydratase (RHM) Gm18 - View
Glycine max Glyma.12G234300 K12450 - UDP-glucose 4,6-dehydratase (RHM) Gm12 - View
Glycine max Glyma.13G264500 K12450 - UDP-glucose 4,6-dehydratase (RHM) Gm13 + View
Gossypium raimondii Gorai.002G046100 Chr02 + View
Gossypium raimondii Gorai.007G332000 Chr07 - View
Gossypium raimondii Gorai.009G362500 Chr09 + View
Hydrangea macrophylla Hma1.2p1_0050F.1_g028730 Hma1.2p1_0050F.1 + View
Lupinus albus Lalb_Chr01g0016291 K12450 - UDP-glucose 4,6-dehydratase (RHM) Lalb_Chr01 + View
Lotus japonicus Lj3g0005710 4.2.1.76 - UDP-glucose 4,6-dehydratase chr3 - View
Lonicera japonica Lj8A145T74 GWHAAZE00000008 + View
Lonicera japonica Lj1A823T38 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_7_100181 Lsat_1_v8_lg_7 + View
Magnolia biondii MBI07_g30206_MAGBIO AED:0.07 Chr07 - View
Malus domestica MD03G1250400 rhamnose biosynthesis 1 Chr03 - View
Malus domestica MD11G1270500 rhamnose biosynthesis 1 Chr11 - View
Malus domestica MD09G1154200 NAD-dependent epimerase/dehydratase family protein Chr09 + View
Manihot esculenta Manes.03G078900 Chromosome03 + View
Nelumbo nucifera Nn3g20968 chr3 + View
Nicotiana tabacum Nitab4.5_0001140g0170 dTDP-glucose 4,6-dehydratase, NAD(P)-binding domain, NAD-dependent epimerase/dehydratase, dTDP-4-dehydrorhamnose reductase Nitab4.5_0001140 + View
Olea europaea Oeu010035.1 chr6 - View
Petunia axillaris Peaxi162Scf00111g01320 dTDP-D-glucose 4,6-dehydratase Peaxi162Scf00111 + View
Prunus persica Prupe.3G170800 K12450 - UDP-glucose 4,6-dehydratase (RHM) Pp03 - View
Prunus persica Prupe.4G155800 K12450 - UDP-glucose 4,6-dehydratase (RHM) Pp04 + View
Pisum sativum Psat1g006880 GDP-mannose 4 +6 dehydratase chr1LG6 - View
Papaver somniferum PSO541G6157 NC_039363.1 + View
Populus trichocarpa Potri.011G103700 K12450 - UDP-glucose 4,6-dehydratase (RHM) Chr11 - View
Populus trichocarpa Potri.001G383500 K12450 - UDP-glucose 4,6-dehydratase (RHM) Chr01 + View
Phaseolus vulgaris Phvul.005G076400 K12450 - UDP-glucose 4,6-dehydratase (RHM) Chr05 - View
Rosa chinensis RcHm_v2.0_Chr5g0029371 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim06G0212400 chr06 - View
Rhododendron simsii Rhsim06G0119000 chr06 + View
Rhododendron simsii RhsimUnG0206500 ctg509 + View
Salix brachista Sabra11G0077100 GWHAAZH00000011 - View
Salix brachista Sabra16G0252600 GWHAAZH00000016 + View
Salix brachista Sabra11G0081900 GWHAAZH00000011 - View
Solanum lycopersicum Solyc07g062130.3 trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 (AHRD V3.3 *** A0A2I4GY66_9ROSI) SL4.0ch07 + View
Schrenkiella parvula Sp3g13010 K12450 - UDP-glucose 4,6-dehydratase (RHM) ch3-1 + View
Solanum pennellii Sopen07g030400 Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in Spenn-ch07 + View
Solanum tuberosum PGSC0003DMG400007059 RHM1/ROL1 ST4.03ch07 + View
Selenicereus undatus Hund10411 Scaffold_10417 + View
Trochodendron aralioides TAR627G0412 group6 - View
Theobroma cacao Thecc.01G160500 Rhamnose biosynthesis 1 Chromosome_1 - View
Theobroma cacao Thecc.07G134400 Rhamnose biosynthesis 1 Chromosome_7 - View
Tarenaya hassleriana THA.LOC104822576 trifunctional UDP-glucose 4%2C6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3%2C5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3-like NW_010966725.1 - View
Tripterygium wilfordii TWI38G1922 NC_052252.1 - View
Tripterygium wilfordii TWI39G0085 NC_052250.1 - View
Vaccinium macrocarpon vmacro09416 Similar to RHM1: Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro11975 Similar to RHM1: Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro12449 Similar to RHM1: Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1080G0370 CM024079.1 - View
Vitis vinifera GSVIVG01014091001 chr19 + View