Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G11270 LG-3 - View
Acer truncatum Atru.chr2.3576 chr2 - View
Actinidia chinensis Actinidia00112 Lachesis_group10 + View
Actinidia chinensis Actinidia35375 Lachesis_group2 - View
Actinidia chinensis Actinidia10756 Lachesis_group9 - View
Actinidia chinensis Actinidia05053 Lachesis_group19 + View
Arabidopsis lyrata AL8G30840 scaffold_8 - View
Amaranthus hybridus Ah.04g166340 Probable manganese-transporting ATPase PDR2 (EC 7.2.2.-) (Protein MALE GAMETOGENESIS IMPAIRED ANTHERS) (Protein PHOSPHATE DEFICIENCY RESPONSE 2) AmaHy_arrow1_Scaffold_4 - View
Arabidopsis thaliana AT5G55300 DNA topoisomerase I alpha Encodes a type-I DNA topoisomerase I. Disruptions in this gene affect phyllotaxis and plant architecture suggesting that the gene plays a critical role in the maintenance of a regular pattern of organ initiation. Isolated as a protein oxidized during seed germination%3B proteomics approach revealed differences in de novo synthesis levels of this protein in condition with vs. without salicylic acid in the period from 0 to 40 hrs. following seed imbibition. Functions in stem cell maintenance at all stages of shoot and floral meristems and in the regulation of gene silencing. DNA topoisomerase I alpha (TOP1ALPHA)%3B FUNCTIONS IN: protein binding%2C DNA topoisomerase type I activity%3B INVOLVED IN: in 12 processes%3B LOCATED IN: chromosome%3B EXPRESSED IN: 30 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA topoisomerase I%2C DNA binding%2C mixed alpha/beta motif%2C eukaryotic-type (InterPro:IPR013030)%2C DNA topoisomerase I%2C DNA binding%2C eukaryotic-type (InterPro:IPR008336)%2C DNA topoisomerase I%2C C-terminal (InterPro:IPR001631)%2C DNA topoisomerase I%2C active site (InterPro:IPR018521)%2C DNA topoisomerase I%2C catalytic core%2C alpha/beta subdomain%2C eukaryotic-type (InterPro:IPR014727)%2C DNA topoisomerase I%2C catalytic core%2C eukaryotic-type (InterPro:IPR013500)%2C DNA topoisomerase I%2C catalytic core%2C alpha-helical subdomain%2C eukaryotic-type (InterPro:IPR014711)%2C DNA topoisomerase I%2C C-terminal%2C eukaryotic-type (InterPro:IPR013499)%2C DNA breaking-rejoining enzyme%2C catalytic core (InterPro:IPR011010)%3B BEST Arabidopsis thaliana protein match is: DNA topoisomerase 1 beta (TAIR:AT5G55310.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB05g22198 ChrB05 - View
Brassica carinata BcaC04g20251 ChrC04 + View
Brassica carinata BcaC03g14246 ChrC03 + View
Brassica carinata BcaB08g35889 ChrB08 - View
Brassica napus A10p12550 A10 - View
Brassica napus A02p09740 A02 + View
Brassica napus C09p45690 C09 + View
Brassica napus C02p16270 C02 + View
Brassica napus A01p17970 A01 + View
Brassica oleracea BolC2t07728H C2 + View
Brassica rapa BraA10t43348Z A10 - View
Brassica rapa BraA02t06039Z A02 + View
Beta vulgaris EL10Ac4g07649 K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) Chr4_EL10_PGA_scaffold1 + View
Corylus avellana Haze_09756 Similar to TOP1A: DNA topoisomerase 1 alpha (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc05_g14440 DNA topoisomerase 1 chr5 - View
Citrus clementina Ciclev10007398m.g scaffold_1 - View
Carpinus fangiana Cfa020264 Cfa08 + View
Cardamine hirsuta CARHR268650 DNA topoisomerase 1 Chr8 - View
Carya illinoinensis CiPaw.12G134500 K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) Chr12 - View
Carya illinoinensis CiPaw.11G196000 K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) Chr11 - View
Citrullus lanatus ClCG10G004900 DNA topoisomerase family protein CG_Chr10 + View
Cucumis melo MELO3C014153.2 DNA topoisomerase 1-like chr06 + View
Carica papaya Cpa.g.sc12.228 supercontig_12 + View
Capsella rubella Carub.0008s1563 K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) scaffold_8 - View
Cucumis sativus L. CsaV3_3G004550 DNA topoisomerase 1-like chr3 + View
Durio zibethinus Duzib268G1883 NW_019168270.1 + View
Durio zibethinus Duzib213G0778 NW_019167993.1 + View
Durio zibethinus Duzib170G0878 NW_019167871.1 + View
Eutrema salsugineum Thhalv10012622m.g scaffold_2 + View
Gossypium hirsutum Gohir.A04G011200 K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) A04 + View
Gossypium hirsutum Gohir.D05G377000 K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) D05 - View
Gossypium raimondii Gorai.009G444700 Chr09 - View
Magnolia biondii MBI16_g41930_MAGBIO AED:0.18 Chr16 - View
Manihot esculenta Manes.15G065000 Chromosome15 + View
Manihot esculenta Manes.03G135300 Chromosome03 - View
Punica granatum PGR083G2247 NC_045133.1 - View
Papaver somniferum PSO210G3652 NC_039359.1 + View
Populus trichocarpa Potri.001G359700 K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) Chr01 - View
Quercus lobata QL08p008078 8 - View
Rhododendron simsii Rhsim06G0224400 chr06 - View
Salix brachista Sabra16G0237400 GWHAAZH00000016 - View
Simmondsia chinensis Sc03g0008200 GWHAASQ00000003 + View
Schrenkiella parvula Sp6g17220 K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) ch6-6 - View
Schrenkiella parvula Sp7g24680 K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) ch7-4 + View
Selenicereus undatus Hund01943 Scaffold_33678 + View
Selenicereus undatus Hund23180 Scaffold_33680 + View
Trochodendron aralioides TAR627G0024 group6 - View
Trochodendron aralioides TAR629G2970 group0 + View
Theobroma cacao Thecc.07G025700 DNA topoisomerase I alpha Chromosome_7 + View
Tarenaya hassleriana THA.LOC104817691 DNA topoisomerase 1 alpha NW_010966021.1 - View
Tarenaya hassleriana THA.LOC104811639 DNA topoisomerase 1 alpha NW_010965372.1 - View
Tripterygium wilfordii TWI39G0959 NC_052250.1 + View
Vaccinium macrocarpon vmacro11579 Similar to TOP1B: DNA topoisomerase 1 beta (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro09681 Similar to TOP1B: DNA topoisomerase 1 beta (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View