Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G14980 LG-3 + View
Arabidopsis lyrata AL6G23060 scaffold_6 - View
Arabidopsis thaliana AT5G12250 beta-6 tubulin Encodes a beta-tubulin. Expression of TUB6 has been shown to decrease in response to cold treatment. beta-6 tubulin (TUB6)%3B FUNCTIONS IN: structural constituent of cytoskeleton%3B INVOLVED IN: microtubule-based process%2C response to salt stress%2C response to cold%3B LOCATED IN: microtubule cytoskeleton%2C plasma membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453)%2C Tubulin (InterPro:IPR000217)%2C Tubulin/FtsZ%2C GTPase domain (InterPro:IPR003008)%2C Tubulin/FtsZ%2C N-terminal (InterPro:IPR019746)%2C Tubulin/FtsZ%2C C-terminal (InterPro:IPR008280)%2C Beta tubulin%2C autoregulation binding site (InterPro:IPR013838)%2C Tubulin%2C conserved site (InterPro:IPR017975)%2C Tubulin/FtsZ%2C 2-layer sandwich domain (InterPro:IPR018316)%3B BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 (TAIR:AT5G62700.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica napus C09p64620 C09 + View
Brassica napus A10p25540 A10 + View
Brassica oleracea BolC9t59295H C9 + View
Brassica rapa BraA10t44621Z A10 + View
Beta vulgaris EL10Ac4g10083 PTHR11588//PTHR11588:SF122 - TUBULIN // SUBFAMILY NOT NAMED Chr4_EL10_PGA_scaffold1 + View
Cardamine hirsuta CARHR200860 Tubulin beta chain Chr6 + View
Citrullus lanatus ClCG03G012430 Tubulin beta-2 chain CG_Chr03 + View
Cucumis melo MELO3C015098.2 Tubulin beta chain chr02 - View
Chenopodium quinoa AUR62006568 TUBB5: Tubulin beta-5 chain C_Quinoa_Scaffold_3429 - View
Chenopodium quinoa AUR62000222 TUBB: Tubulin beta chain C_Quinoa_Scaffold_2088 - View
Capsella rubella Carub.0006s1076 PTHR11588//PTHR11588:SF106 - TUBULIN // TUBULIN BETA-6 CHAIN scaffold_6 - View
Davidia involucrata Dinv29315 GWHABJS00000007 + View
Eutrema salsugineum Thhalv10013524m.g PTHR11588:SF106 - TUBULIN BETA-6 CHAIN scaffold_2 - View
Manihot esculenta Manes.02G136200 Chromosome02 + View
Punica granatum PGR102G2154 NC_045129.1 + View
Punica granatum PGR119G2517 NC_045132.1 - View
Salix brachista Sabra16G0167800 GWHAAZH00000016 + View
Schrenkiella parvula Sp6g31390 PTHR11588:SF106 - TUBULIN BETA-6 CHAIN ch6-6 + View
Selenicereus undatus Hund07416 Scaffold_33676 + View
Selenicereus undatus Hund21960 Scaffold_33680 + View
Tarenaya hassleriana THA.LOC104811205 tubulin beta-4 chain NW_010965304.1 - View