Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0045399 PREDICTED: peptide deformylase 1B, chloroplastic [Vitis vinifera] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis lyrata AL6G25430 scaffold_6 - View
Arabidopsis thaliana AT5G14660 peptide deformylase 1B Encodes a peptide deformylase PDF1B. The crystal structure has been determined at a resolution of 0.24 nm (Biochem J%2C 2008%2C vol 413:417-427). peptide deformylase 1B (PDF1B)%3B FUNCTIONS IN: peptide deformylase activity%3B INVOLVED IN: translation%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Formylmethionine deformylase (InterPro:IPR000181)%3B BEST Arabidopsis thaliana protein match is: peptide deformylase 1A (TAIR:AT1G15390.1)%3B Has 11015 Blast hits to 11012 proteins in 2634 species: Archae - 4%3B Bacteria - 7821%3B Metazoa - 125%3B Fungi - 0%3B Plants - 121%3B Viruses - 2%3B Other Eukaryotes - 2942 (source: NCBI BLink). Chr5 - View
Corylus avellana Haze_14694 Similar to PDF1B: Peptide deformylase 1B, chloroplastic/mitochondrial (Arabidopsis thaliana OX%3D3702) 5 + View
Cardamine hirsuta CARHR198660 peptide deformylase 1B Chr6 + View
Carya illinoinensis CiPaw.03G040100 3.5.1.88 - Peptide deformylase / Polypeptide deformylase Chr03 + View
Capsella rubella Carub.0006s1283 PTHR10458//PTHR10458:SF2 - PEPTIDE DEFORMYLASE // PEPTIDE DEFORMYLASE 1B, CHLOROPLASTIC/MITOCHONDRIAL scaffold_6 - View
Cucumis sativus L. CsaV3_3G042570 Peptide deformylase chr3 + View
Eutrema salsugineum Thhalv10014367m.g 3.5.1.88 - Peptide deformylase / Polypeptide deformylase scaffold_2 - View
Fragaria vesca FvH4_6g50950 3.5.1.88 - Peptide deformylase / Polypeptide deformylase Fvb6 + View
Lonicera japonica Lj7A594G50 GWHAAZE00000007 + View
Malus domestica MD09G1030300 peptide deformylase 1B Chr09 - View
Prunus persica Prupe.3G287100 3.5.1.88 - Peptide deformylase / Polypeptide deformylase Pp03 + View
Schrenkiella parvula Sp6g29380 3.5.1.88 - Peptide deformylase / Polypeptide deformylase ch6-6 + View
Trochodendron aralioides TAR622G0841 group8 + View
Theobroma cacao Thecc.04G012100 Polypeptide deformylase Chromosome_4 + View