Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Acer truncatum | Atru.chr5.1710 | chr5 | + | View | |
| Actinidia chinensis | Actinidia04443 | Lachesis_group3 | + | View | |
| Actinidia chinensis | Actinidia34751 | Lachesis_group6 | + | View | |
| Actinidia chinensis | Actinidia40050 | Lachesis_group22 | - | View | |
| Arabidopsis lyrata | AL3G14520 | scaffold_3 | - | View | |
| Avicennia marina | MSTRG.24676 | ScioBoG_4088_HRSCAF_4107 | - | View | |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.7VWF6Q | PF04852 - Protein of unknown function (DUF640) (DUF640) | arahy.Tifrunner.gnm1.Arahy.16 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.3M3KZ3 | PF04852 - Protein of unknown function (DUF640) (DUF640) | arahy.Tifrunner.gnm1.Arahy.06 | - | View |
| Arabidopsis thaliana | AT3G04510 | LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) LIGHT SENSITIVE HYPOCOTYLS 2 (LSH2)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 4 leaf senescence stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT5G28490.1)%3B Has 309 Blast hits to 309 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 12%3B Fungi - 0%3B Plants - 297%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). | Chr3 | - | View |
| Brassica carinata | BcaC05g30192 | ChrC05 | + | View | |
| Brassica carinata | BcaC05g29936 | ChrC05 | + | View | |
| Brassica napus | A05p42960 | A05 | + | View | |
| Brassica napus | C05p62740 | C05 | + | View | |
| Brassica oleracea | BolC5t34927H | C5 | + | View | |
| Brassica rapa | BraA05t23041Z | A05 | + | View | |
| Capsicum annuum | CAN.G771.29 | PGAv.1.6.scaffold771 | + | View | |
| Cannabis sativa | CANSAT54G0564 | NC_044375.1 | - | View | |
| Cicer arietinum L. | Ca_10016_v3 | Ca_LG4_v3 | - | View | |
| Corylus avellana | Haze_04436 | Similar to LSH1: Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 (Arabidopsis thaliana OX%3D3702) | 2 | - | View |
| Coffea canephora | Cc02_g08880 | Protein of unknown function (DUF640) | chr2 | + | View |
| Citrus clementina | Ciclev10022288m.g | scaffold_3 | - | View | |
| Carpinus fangiana | Cfa006345 | Cfa02 | + | View | |
| Capsella rubella | Carub.0003s0367 | PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED | scaffold_3 | - | View |
| Davidia involucrata | Dinv29851 | GWHABJS00000016 | - | View | |
| Durio zibethinus | Duzib177G0319 | NW_019168004.1 | - | View | |
| Durio zibethinus | Duzib128G0347 | NW_019168481.1 | + | View | |
| Durio zibethinus | Duzib106G1946 | NW_019168492.1 | + | View | |
| Fragaria x ananassa | FAN09G0810 | PF04852 - Protein of unknown function (DUF640) (DUF640) | Fvb6-2 | + | View |
| Fragaria x ananassa | FAN05G4493 | PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED | Fvb6-3 | - | View |
| Fragaria x ananassa | FAN14G0668 | PF04852 - Protein of unknown function (DUF640) (DUF640) | Fvb6-1 | + | View |
| Fragaria x ananassa | FAN14G4745 | PF04852 - Protein of unknown function (DUF640) (DUF640) | Fvb6-1 | + | View |
| Fragaria x ananassa | FAN02G3538 | PF04852 - Protein of unknown function (DUF640) (DUF640) | Fvb6-4 | - | View |
| Fragaria vesca | FvH4_6g01940 | PF04852 - Protein of unknown function (DUF640) (DUF640) | Fvb6 | - | View |
| Gossypium hirsutum | Gohir.A11G247700 | PF04852 - Protein of unknown function (DUF640) (DUF640) | A11 | - | View |
| Gossypium hirsutum | Gohir.D11G258100 | PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED | D11 | - | View |
| Gossypium hirsutum | Gohir.D13G173100 | PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED | D13 | - | View |
| Glycine max | Glyma.19G248300 | PF04852 - Protein of unknown function (DUF640) (DUF640) | Gm19 | + | View |
| Glycine max | Glyma.10G037600 | PF04852 - Protein of unknown function (DUF640) (DUF640) | Gm10 | - | View |
| Gossypium raimondii | Gorai.007G276300 | Chr07 | - | View | |
| Gossypium raimondii | Gorai.013G187500 | Chr13 | + | View | |
| Hydrangea macrophylla | Hma1.2p1_0075F.1_g039190 | Hma1.2p1_0075F.1 | + | View | |
| Lupinus albus | Lalb_Chr02g0152501 | PF04852 - Protein of unknown function (DUF640) (DUF640) | Lalb_Chr02 | + | View |
| Lotus japonicus | Lj5g0023611 | PF04852 - Protein of unknown function (DUF640) (DUF640) | chr5 | - | View |
| Malus domestica | MD04G1229700 | Protein of unknown function (DUF640) | Chr04 | + | View |
| Manihot esculenta | Manes.08G139300 | Chromosome08 | + | View | |
| Manihot esculenta | Manes.09G148200 | Chromosome09 | - | View | |
| Medicago truncatula | Medtr7g115700 | light-dependent short hypocotyls protein | chr7 | + | View |
| Medicago truncatula | Medtr1g080210 | light-dependent short hypocotyls protein | chr1 | + | View |
| Punica granatum | PGR004G2033 | NC_045131.1 | + | View | |
| Prunus persica | Prupe.1G040300 | PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED | Pp01 | + | View |
| Prunus persica | Prupe.6G349800 | PF04852 - Protein of unknown function (DUF640) (DUF640) | Pp06 | + | View |
| Populus trichocarpa | Potri.019G018600 | PF04852 - Protein of unknown function (DUF640) (DUF640) | Chr19 | + | View |
| Populus trichocarpa | Potri.013G046500 | PF04852 - Protein of unknown function (DUF640) (DUF640) | Chr13 | + | View |
| Quercus lobata | QL03p030755 | 3 | - | View | |
| Rhododendron simsii | Rhsim09G0137300 | chr09 | + | View | |
| Salix brachista | Sabra13G0042600 | GWHAAZH00000013 | + | View | |
| Salix brachista | Sabra19G0028400 | GWHAAZH00000019 | + | View | |
| Solanum lycopersicum | Solyc04g009980.4 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 (AHRD V3.3 *** A0A2G3CE82_CAPCH) | SL4.0ch04 | + | View |
| Solanum lycopersicum | Solyc09g090180.1 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 (AHRD V3.3 *** A0A2G2W1D1_CAPBA) | SL4.0ch09 | - | View |
| Schrenkiella parvula | Sp3g03360 | PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED | ch3-1 | - | View |
| Solanum pennellii | Sopen09g033090 | LIGHT SENSITIVE HYPOCOTYLS 3 (LSH3) | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 | BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) | Spenn-ch09 | - | View |
| Solanum tuberosum | PGSC0003DMG400017168 | Conserved gene of unknown function | ST4.03ch09 | - | View |
| Solanum tuberosum | PGSC0003DMG400011497 | Light-dependent short hypocotyls 1 | ST4.03ch04 | + | View |
| Trochodendron aralioides | TAR362G0865 | group17 | + | View | |
| Trochodendron aralioides | TAR365G0386 | group16 | - | View | |
| Trochodendron aralioides | TAR636G2910 | group1 | - | View | |
| Theobroma cacao | Thecc.05G271300 | Uncharacterized protein | Chromosome_5 | - | View |
| Tripterygium wilfordii | TWI53G1672 | NC_052244.1 | - | View | |
| Vaccinium macrocarpon | vmacro10362 | Similar to LSH2: Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 2 (Arabidopsis thaliana OX%3D3702) | chr8_Vaccinium_macrocarpon_Stevens_v1 | - | View |
| Vitis vinifera | GSVIVG01023521001 | chr14 | + | View |