Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0042816 hypothetical protein VITISV_031499 [Vitis vinifera] Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G3630 LG-5 - View
Acer truncatum Atru.chr4.2182 chr4 + View
Actinidia chinensis Actinidia04472 Lachesis_group3 - View
Actinidia chinensis Actinidia40081 Lachesis_group22 + View
Arabidopsis lyrata AL1G13900 scaffold_1 - View
Arabidopsis lyrata AL8G16740 scaffold_8 - View
Avicennia marina MSTRG.24697 ScioBoG_4088_HRSCAF_4107 + View
Aquilegia oxysepala Aqoxy2G03594 CHR02 - View
Aquilegia oxysepala Aqoxy5G00291 CHR05 - View
Arabidopsis thaliana AT1G04300 TRAF-like superfamily protein TRAF-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974)%2C MATH (InterPro:IPR002083)%2C TRAF-type (InterPro:IPR013322)%3B BEST Arabidopsis thaliana protein match is: TRAF-like superfamily protein (TAIR:AT5G43560.2)%3B Has 16577 Blast hits to 11240 proteins in 949 species: Archae - 20%3B Bacteria - 1945%3B Metazoa - 5204%3B Fungi - 2178%3B Plants - 1117%3B Viruses - 112%3B Other Eukaryotes - 6001 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT5G43560 TRAF-like superfamily protein TRAF-like superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974)%2C MATH (InterPro:IPR002083)%3B BEST Arabidopsis thaliana protein match is: TRAF-like superfamily protein (TAIR:AT1G04300.1)%3B Has 12918 Blast hits to 9295 proteins in 852 species: Archae - 42%3B Bacteria - 1359%3B Metazoa - 4426%3B Fungi - 1772%3B Plants - 1152%3B Viruses - 72%3B Other Eukaryotes - 4095 (source: NCBI BLink). TRAF-like superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974)%2C MATH (InterPro:IPR002083)%3B BEST Arabidopsis thaliana protein match is: TRAF-like superfamily protein (TAIR:AT1G04300.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC05g24454 ChrC05 + View
Brassica carinata BcaC06g34644 ChrC06 - View
Brassica napus C05p02490 C05 - View
Brassica napus C07p26200 C07 + View
Brassica napus A06p47810 A06 - View
Brassica napus C08p01010 C08 - View
Brassica napus A10p02700 A10 - View
Brassica napus C08p52350 C08 + View
Brassica oleracea BolC7t43146H C7 + View
Brassica oleracea BolC5t29028H C5 - View
Brassica rapa BraA06t27651Z A06 - View
Brassica rapa BraA10t42539Z A10 - View
Capsicum annuum CAN.G638.71 PGAv.1.6.scaffold638 + View
Cicer arietinum L. Ca_11941_v3 Ca_LG4_v3 - View
Corylus avellana Haze_11315 Similar to TRAF1A: TNF receptor-associated factor homolog 1a (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc03_g04990 Putative MATH domain-containing protein At5g43560 chr3 - View
Citrus clementina Ciclev10004192m.g scaffold_9 + View
Carya illinoinensis CiPaw.02G115800 PF00917 - MATH domain (MATH) Chr02 + View
Carya illinoinensis CiPaw.01G189300 PF00917 - MATH domain (MATH) Chr01 + View
Citrullus lanatus ClCG05G004530 MATH domain-containing protein CG_Chr05 + View
Cucumis melo MELO3C006460.2 TRAF-like superfamily protein chr06 + View
Carica papaya Cpa.g.sc44.110 supercontig_44 + View
Chenopodium quinoa AUR62002254 At5g43560: MATH domain-containing protein At5g43560 C_Quinoa_Scaffold_4480 - View
Chenopodium quinoa AUR62015466 At5g43560: MATH domain-containing protein At5g43560 C_Quinoa_Scaffold_2751 - View
Capsella rubella Carub.0001s0349 KOG3584 - cAMP response element binding protein and related transcription factors scaffold_1 - View
Cucumis sativus L. CsaV3_3G012500 MATH domain-containing protein chr3 + View
Daucus carota DCAR_002340 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_027286 hypothetical protein DCARv2_Chr8 + View
Daucus carota DCAR_030728 hypothetical protein DCARv2_Chr9 - View
Davidia involucrata Dinv29900 GWHABJS00000016 + View
Davidia involucrata Dinv44647 GWHABJS00000014 + View
Durio zibethinus Duzib052G0795 NW_019167849.1 - View
Durio zibethinus Duzib212G0982 NW_019168026.1 + View
Erigeron canadensis ECA233G3249 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA240G2732 Conyza_canadensis_scaffold:5 + View
Eucalyptus grandis Eucgr.H03150 Chr08 + View
Erythranthe guttata Migut.G00445 scaffold_7 - View
Eutrema salsugineum Thhalv10006644m.g PF00917 - MATH domain (MATH) scaffold_5 + View
Fragaria x ananassa FAN22G0018 PF00917 - MATH domain (MATH) Fvb4-1 - View
Fragaria x ananassa FAN12G0222 PF00917 - MATH domain (MATH) Fvb4-3 + View
Fragaria vesca FvH4_4g02970 PF00917 - MATH domain (MATH) Fvb4 - View
Gossypium hirsutum Gohir.A10G113500 PF00917 - MATH domain (MATH) A10 + View
Gossypium hirsutum Gohir.A09G223700 PF00917 - MATH domain (MATH) A09 - View
Gossypium hirsutum Gohir.D10G153900 PF00917 - MATH domain (MATH) D10 - View
Gossypium hirsutum Gohir.A02G036400 PF00917 - MATH domain (MATH) A02 + View
Gossypium hirsutum Gohir.D09G225700 PF00917 - MATH domain (MATH) D09 - View
Gossypium hirsutum Gohir.D02G043000 PF00917 - MATH domain (MATH) D02 + View
Gossypium raimondii Gorai.011G171900 Chr11 - View
Gossypium raimondii Gorai.006G247200 Chr06 - View
Helianthus annuus HanXRQChr13g0424301 Putative TRAF-like HanXRQChr13 + View
Helianthus annuus HanXRQChr03g0092321 Putative TRAF-like HanXRQChr03 + View
Lupinus albus Lalb_Chr03g0037041 PF00917 - MATH domain (MATH) Lalb_Chr03 - View
Lonicera japonica Lj6C657T15 GWHAAZE00000006 - View
Lactuca sativa Lsat_1_v5_gn_3_122660 PTHR24007 - BRCA1-ASSOCIATED PROTEIN Lsat_1_v8_lg_3 - View
Malus domestica MD13G1209100 TRAF-like superfamily protein Chr13 - View
Malus domestica MD16G1211000 TRAF-like superfamily protein Chr16 - View
Manihot esculenta Manes.03G168200 Chromosome03 + View
Manihot esculenta Manes.15G037500 Chromosome15 - View
Medicago truncatula Medtr1g044450 meprin and TRAF (MATH)-like domain protein chr1 + View
Nelumbo nucifera Nn1g02667 chr1 - View
Nelumbo nucifera Nn3g19583 chr3 - View
Nicotiana tabacum Nitab4.5_0000436g0070 MATH, TRAF-like Nitab4.5_0000436 - View
Olea europaea Oeu021414.1 scaffold1933 - View
Petunia axillaris Peaxi162Scf00024g00053 TRAF-like superfamily protein Peaxi162Scf00024 - View
Punica granatum PGR004G2419 NC_045131.1 - View
Prunus persica Prupe.1G033200 Pp01 - View
Papaver somniferum PSO210G1885 NC_039359.1 + View
Populus trichocarpa Potri.008G163300 PF00917 - MATH domain (MATH) Chr08 - View
Populus trichocarpa Potri.010G075000 PF00917 - MATH domain (MATH) Chr10 + View
Quercus lobata QL06p015924 6 - View
Rosa chinensis RcHm_v2.0_Chr4g0391041 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim04G0189200 chr04 + View
Rhododendron simsii Rhsim02G0034400 chr02 - View
Salvia bowleyana SalBow2G1285 GWHASIU00000007 + View
Salix brachista Sabra08G0124600 GWHAAZH00000008 - View
Salix brachista Sabra10G0033800 GWHAAZH00000010 - View
Simmondsia chinensis Sc25g0004120 GWHAASQ00000025 + View
Simmondsia chinensis Sc13g0005120 GWHAASQ00000013 - View
Sechium edule Sed0000078 LG02 - View
Sechium edule Sed0005071 LG12 - View
Sapria himalayana SHI00617 scaffold1_25991295 - View
Solanum lycopersicum Solyc09g089560.4 MATH domain-containing protein (AHRD V3.3 *-* A0A1Q3BTU7_CEPFO) SL4.0ch09 - View
Solanum lycopersicum Solyc06g053740.4 MATH domain-containing protein (AHRD V3.3 *-* A0A1Q3BTU7_CEPFO) SL4.0ch06 + View
Solanum lycopersicum Solyc03g005430.4 MATH domain-containing protein (AHRD V3.3 *** A0A1Q3BTU7_CEPFO) SL4.0ch03 - View
Schrenkiella parvula Sp2g08380 PF00917 - MATH domain (MATH) ch2-4 + View
Schrenkiella parvula Sp1g03110 PF00917 - MATH domain (MATH) ch1-1 - View
Solanum pennellii Sopen09g032480 TRAF-like superfamily protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: TRAF-like , MATH | BEST Arabidopsis thaliana protein match is: TRAF-like superfamily protein . Spenn-ch09 - View
Solanum pennellii Sopen03g001460 TRAF-like superfamily protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: TRAF-like , MATH | BEST Arabidopsis thaliana protein match is: TRAF-like superfamily protein . Spenn-ch03 - View
Solanum pennellii Sopen06g018850 TRAF-like superfamily protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: TRAF-like , MATH | BEST Arabidopsis thaliana protein match is: TRAF-like superfamily protein Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG402016322 MATH domain-containing protein ST4.03ch06 + View
Solanum tuberosum PGSC0003DMG400017192 MATH domain containing protein ST4.03ch09 - View
Selenicereus undatus Hund11858 Scaffold_33679 - View
Trochodendron aralioides TAR636G2710 group1 + View
Trochodendron aralioides TAR362G0167 group17 - View
Trochodendron aralioides TAR633G1794 group2 + View
Theobroma cacao Thecc.04G247700 TRAF-like superfamily protein Chromosome_4 - View
Tripterygium wilfordii TWI09G1092 NC_052245.1 + View
Tripterygium wilfordii TWI73G0813 NC_052232.1 - View
Utricularia gibba unitig_748.g8318 unitig_748 + View
Utricularia gibba unitig_748.g7317 unitig_748 - View
Vaccinium macrocarpon vmacro08439 Similar to TRAF1B: TNF receptor-associated factor homolog 1b (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro15416 Similar to TRAF1B: TNF receptor-associated factor homolog 1b (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G0464 CM024071.1 + View
Vitis vinifera GSVIVG01018133001 chr5 + View