Gene: Sopen03g001460

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g001460
  • Transcript Identifier Sopen03g001460.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 307187-320159 : negative

Gene Family Information

  • ID HOM05D002224
  • #Genes/#Species 302/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g001460.1

Descriptions

  • Description TRAF-like superfamily protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: TRAF-like , MATH | BEST Arabidopsis thaliana protein match is: TRAF-like superfamily protein .
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045087
ISO
PLAZA Integrative Orthologyinnate immune response AT5G43560
GO:1905037
ISO
PLAZA Integrative Orthologyautophagosome organization AT5G43560

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0043424
ISO
PLAZA Integrative Orthologyprotein histidine kinase binding AT5G43560

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G43560
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G04300
GO:0005776
ISO
PLAZA Integrative Orthologyautophagosome AT5G43560
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G04300

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002083 MATH/TRAF domain
IPR008974 TRAF-like
Mapman id Description
19.3.2.3 Protein homeostasis.autophagy.nucleation complexes.auxiliary ATG6-stability component TRAF1