Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G6920 LG-5 - View
Acer truncatum Atru.chr3.4044 chr3 - View
Actinidia chinensis Actinidia25120 Lachesis_group20 - View
Arabidopsis lyrata AL4G24250 scaffold_4 + View
Aquilegia oxysepala Aqoxy1G00773 CHR01 - View
Arabidopsis thaliana AT2G29540 RNApolymerase 14 kDa subunit RNA polymerase I(A) and III(C) 14 kDa subunit RNApolymerase 14 kDa subunit (RPC14)%3B FUNCTIONS IN: DNA-directed RNA polymerase activity%2C protein dimerization activity%2C DNA binding%3B INVOLVED IN: tRNA transcription%3B LOCATED IN: DNA-directed RNA polymerase III complex%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase Rpb11%2C 13-16kDa subunit%2C conserved site (InterPro:IPR008193)%2C DNA-directed RNA polymerase%2C dimerisation (InterPro:IPR011261)%2C DNA-directed RNA polymerase%2C RBP11-like (InterPro:IPR009025)%3B BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase%2C RBP11-like (TAIR:AT3G52090.1)%3B Has 889 Blast hits to 889 proteins in 232 species: Archae - 23%3B Bacteria - 0%3B Metazoa - 328%3B Fungi - 301%3B Plants - 115%3B Viruses - 0%3B Other Eukaryotes - 122 (source: NCBI BLink). RNApolymerase 14 kDa subunit (RPC14)%3B FUNCTIONS IN: DNA-directed RNA polymerase activity%2C protein dimerization activity%2C DNA binding%3B INVOLVED IN: tRNA transcription%3B LOCATED IN: DNA-directed RNA polymerase III complex%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase Rpb11%2C 13-16kDa subunit%2C conserved site (InterPro:IPR008193)%2C DNA-directed RNA polymerase%2C dimerisation (InterPro:IPR011261)%2C DNA-directed RNA polymerase%2C RBP11-like (InterPro:IPR009025)%3B BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase%2C RBP11-like (TAIR:AT3G52090.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaC02g08078 ChrC02 - View
Brassica napus A04p22530 A04 + View
Brassica napus C04p21300 C04 - View
Brassica napus A05p15860 A05 - View
Brassica oleracea BolC4t23659H C4 - View
Brassica rapa BraA04t17798Z A04 + View
Beta vulgaris EL10Ac7g16096 K03020 - DNA-directed RNA polymerases I and III subunit RPAC2 (RPC19, POLR1D) Chr7_EL10_PGA_scaffold5 + View
Cannabis sativa CANSAT54G2674 NC_044375.1 + View
Corylus avellana Haze_24228 Similar to NRPB11: DNA-directed RNA polymerases II, IV and V subunit 11 (Arabidopsis thaliana OX%3D3702) 6 + View
Citrus clementina Ciclev10029631m.g scaffold_8 + View
Carpinus fangiana Cfa011625 Cfa04 + View
Cardamine hirsuta CARHR122880 DNA-directed RNA polymerase I and III Chr4 + View
Carya illinoinensis CiPaw.13G084200 K03020 - DNA-directed RNA polymerases I and III subunit RPAC2 (RPC19, POLR1D) Chr13 - View
Corchorus olitorius COL.COLO4_19069 DNA-directed RNA polymerase%2C RBP11-like protein AWUE01016544.1 + View
Carica papaya Cpa.g.sc112.95 supercontig_112 - View
Chenopodium quinoa AUR62001716 polr1d: DNA-directed RNA polymerases I and III subunit RPAC2 C_Quinoa_Scaffold_2716 - View
Chenopodium quinoa AUR62020054 polr1d: DNA-directed RNA polymerases I and III subunit RPAC2 C_Quinoa_Scaffold_2465 - View
Capsella rubella Carub.0004s1059 K03020 - DNA-directed RNA polymerases I and III subunit RPAC2 (RPC19, POLR1D) scaffold_4 + View
Cucumis sativus L. CsaV3_1G035860 DNA-directed RNA polymerases I and III subunit RPAC2 chr1 + View
Davidia involucrata Dinv34318 GWHABJS00000007 + View
Durio zibethinus Duzib168G1059 NW_019168159.1 + View
Durio zibethinus Duzib150G0459 NW_019167882.1 + View
Erigeron canadensis ECA248G2580 Conyza_canadensis_scaffold:9 + View
Eutrema salsugineum Thhalv10017434m.g K03020 - DNA-directed RNA polymerases I and III subunit RPAC2 (RPC19, POLR1D) scaffold_10 + View
Gossypium hirsutum Gohir.D03G119900 K03020 - DNA-directed RNA polymerases I and III subunit RPAC2 (RPC19, POLR1D) D03 - View
Gossypium hirsutum Gohir.A03G047300 K03020 - DNA-directed RNA polymerases I and III subunit RPAC2 (RPC19, POLR1D) A03 + View
Gossypium raimondii Gorai.003G126400 Chr03 - View
Hydrangea macrophylla Hma1.2p1_0543F.1_g175312 Hma1.2p1_0543F.1 - View
Hydrangea macrophylla Hma1.2p1_0274F.1_g110300 Hma1.2p1_0274F.1 - View
Lactuca sativa Lsat_1_v5_gn_5_168181 K03020 - DNA-directed RNA polymerases I and III subunit RPAC2 (RPC19, POLR1D) Lsat_1_v8_lg_5 - View
Manihot esculenta Manes.01G166500 Chromosome01 - View
Nelumbo nucifera Nn2g13557 chr2 + View
Punica granatum PGR102G1512 NC_045129.1 + View
Papaver somniferum PSO384G4465 NC_039368.1 + View
Papaver somniferum PSO339G2392 NC_039366.1 - View
Populus trichocarpa Potri.001G246600 K03020 - DNA-directed RNA polymerases I and III subunit RPAC2 (RPC19, POLR1D) Chr01 + View
Quercus lobata QL01p028911 1 + View
Rhododendron simsii Rhsim13G0075300 chr13 - View
Salix brachista Sabra16G0149700 GWHAAZH00000016 + View
Simmondsia chinensis Sc12g0001080 GWHAASQ00000012 - View
Sechium edule Sed0025309 LG13 + View
Sechium edule Sed0019378 LG01 + View
Schrenkiella parvula Sp4g12270 K03020 - DNA-directed RNA polymerases I and III subunit RPAC2 (RPC19, POLR1D) ch4-6 + View
Selenicereus undatus Hund04903 Scaffold_19641 - View
Trochodendron aralioides TAR369G1135 group18 - View
Trochodendron aralioides TAR623G0256 group7 + View
Theobroma cacao Thecc.09G309300 DNA-directed RNA polymerases I and III subunit RPAC2 Chromosome_9 - View
Tarenaya hassleriana THA.LOC104800713 DNA-directed RNA polymerases I and III subunit RPAC2 NW_010969548.1 + View
Tripterygium wilfordii TWI79G0904 NC_052238.1 - View
Tripterygium wilfordii TWI75G1138 NC_052253.1 - View
Vaccinium macrocarpon vmacro03011 Similar to polr1d: DNA-directed RNA polymerases I and III subunit RPAC2 (Xenopus laevis OX%3D8355) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01024830001 chr6 + View