Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0022401 PREDICTED: telomere repeat-binding factor 1-like isoform X1 [Solanum tuberosum] Contig1132 + View
CSS0012155 unnamed protein product [Coffea canephora] Chr13 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G6380 LG-8 - View
Acer truncatum Atru.chr5.2331 chr5 + View
Actinidia chinensis Actinidia00365 Lachesis_group12 - View
Actinidia chinensis Actinidia27994 Lachesis_group16 - View
Actinidia chinensis Actinidia11978 Lachesis_group11 + View
Avicennia marina MSTRG.20221 ScioBoG_26180_HRSCAF_26306 - View
Avicennia marina MSTRG.23666 ScioBoG_3895_HRSCAF_3912 + View
Avicennia marina MSTRG.16676 ScioBoG_19743_HRSCAF_19834 + View
Arabidopsis thaliana AT5G67580 Homeodomain-like/winged-helix DNA-binding family protein Encodes a telomeric DNA binding protein. In vitro%2C the protein preferentially binds double-stranded telomeric repeats%2C but it can also bind to the single G-rich telomeric strand. TRB2%3B FUNCTIONS IN: single-stranded telomeric DNA binding%2C DNA binding%2C protein homodimerization activity%2C sequence-specific DNA binding transcription factor activity%2C double-stranded telomeric DNA binding%3B INVOLVED IN: in 8 processes%3B LOCATED IN: nucleus%2C nucleosome%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C SANT%2C DNA-binding (InterPro:IPR001005)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C Homeodomain-like (InterPro:IPR009057)%2C Histone H1/H5 (InterPro:IPR005818)%2C Homeodomain-related (InterPro:IPR012287)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%3B BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1)%3B Has 792 Blast hits to 790 proteins in 134 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 127%3B Fungi - 75%3B Plants - 516%3B Viruses - 0%3B Other Eukaryotes - 72 (source: NCBI BLink). Chr5 - View
Brassica napus A08p03460 A08 + View
Brassica napus C06p04680 C06 - View
Brassica oleracea BolC6t35598H C6 - View
Brassica rapa BraA06t23556Z A06 + View
Corylus avellana Haze_10266 Similar to TRB1: Telomere repeat-binding factor 1 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc07_g07150 Telomere repeat-binding factor 2 chr7 - View
Coffea canephora Cc02_g19920 Telomere repeat-binding factor 1 chr2 + View
Citrus clementina Ciclev10028926m.g scaffold_8 + View
Carya illinoinensis CiPaw.01G004100 PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED Chr01 + View
Carya illinoinensis CiPaw.05G018600 PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED Chr05 - View
Carya illinoinensis CiPaw.06G165300 PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED Chr06 + View
Citrullus lanatus ClCG10G010150 Telomere repeat binding factor 1 CG_Chr10 + View
Cucumis melo MELO3C007640.2 telomere repeat-binding factor 2 isoform X1 chr08 - View
Carica papaya Cpa.g.sc106.31 supercontig_106 + View
Capsella rubella Carub.0008s2689 PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED scaffold_8 + View
Cucumis sativus L. CsaV3_6G044170 telomere repeat-binding factor 1-like chr6 - View
Cucumis sativus L. CsaV3_4G000180 telomere repeat-binding factor 1-like chr4 + View
Daucus carota DCAR_021950 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv42238 GWHABJS00000002 + View
Davidia involucrata Dinv26937 GWHABJS00000014 - View
Davidia involucrata Dinv15813 GWHABJS00000005 - View
Durio zibethinus Duzib052G0250 NW_019167849.1 + View
Durio zibethinus Duzib147G1283 NW_019168470.1 + View
Erigeron canadensis ECA234G2887 Conyza_canadensis_scaffold:4 + View
Erythranthe guttata Migut.B00451 scaffold_2 - View
Eutrema salsugineum Thhalv10004691m.g PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED scaffold_6 - View
Fragaria x ananassa FAN19G1449 PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED Fvb1-4 - View
Fragaria x ananassa FAN24G1747 PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED Fvb2-2 - View
Fragaria x ananassa FAN26G1448 PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED Fvb1-2 - View
Gossypium hirsutum Gohir.D02G203700 PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED D02 + View
Gossypium hirsutum Gohir.A02G151200 PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED A02 + View
Gossypium hirsutum Gohir.D11G209000 PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED D11 - View
Gossypium raimondii Gorai.007G224200 Chr07 - View
Gossypium raimondii Gorai.005G230800 Chr05 + View
Hydrangea macrophylla Hma1.2p1_0661F.1_g198170 Hma1.2p1_0661F.1 + View
Lotus japonicus Lj4g0005827 PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED chr4 - View
Lactuca sativa Lsat_1_v5_gn_2_82680 PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED Lsat_1_v8_lg_2 + View
Lactuca sativa Lsat_1_v5_gn_5_113860 Lsat_1_v8_lg_5 + View
Malus domestica MD02G1186900 Homeodomain-like/winged-helix DNA-binding family protein Chr02 - View
Malus domestica MD15G1298000 telomere repeat binding factor 1 Chr15 - View
Malus domestica MD10G1106800 telomere repeat binding factor 1 Chr10 - View
Manihot esculenta Manes.13G111100 Chromosome13 + View
Manihot esculenta Manes.10G083455 Chromosome10 + View
Nelumbo nucifera Nn1g04540 chr1 + View
Olea europaea Oeu037284.1 chr5 - View
Olea europaea Oeu009667.3 chr3 + View
Petunia axillaris Peaxi162Scf00003g02843 telomere repeat binding factor 1 Peaxi162Scf00003 - View
Petunia axillaris Peaxi162Scf00016g02929 telomere repeat binding factor 1 Peaxi162Scf00016 - View
Petunia axillaris Peaxi162Scf00152g00527 telomere repeat binding factor 1 Peaxi162Scf00152 - View
Punica granatum PGR102G1507 NC_045129.1 + View
Prunus persica Prupe.8G146200 PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED Pp08 - View
Prunus persica Prupe.6G219800 PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED Pp06 + View
Papaver somniferum PSO017G0359 NC_039362.1 - View
Papaver somniferum PSO170G1287 NC_039360.1 - View
Papaver somniferum PSO541G0983 NC_039363.1 + View
Populus trichocarpa Potri.009G087000 PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED Chr09 + View
Quercus lobata QL06p039525 6 + View
Rosa chinensis RcHm_v2.0_Chr6g0252701 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim11G0152500 chr11 + View
Rhododendron simsii RhsimUnG0124200 ctg321 + View
Striga asiatica SGA_v2.0_scaffold32G12993 scaffold32 + View
Striga asiatica SGA_v2.0_scaffold225G43049 scaffold225 - View
Striga asiatica SGA_v2.0_scaffold15G07464 scaffold15 - View
Salix brachista Sabra09G0066600 GWHAAZH00000009 + View
Salix brachista Sabra16G0182300 GWHAAZH00000016 + View
Sechium edule Sed0010609 LG13 + View
Sechium edule Sed0009800 LG14 - View
Solanum lycopersicum Solyc01g106940.4 Telomere repeat-binding factor 2 (AHRD V3.3 *-* A0A2G3AVM6_CAPCH) SL4.0ch01 + View
Schrenkiella parvula Sp2g29070 PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED ch2-4 + View
Solanum tuberosum PGSC0003DMG400039707 Histone H1.1 ST4.03ch10 + View
Trochodendron aralioides TAR628G1060 group5 + View
Trochodendron aralioides TAR625G1229 group4 - View
Theobroma cacao Thecc.01G073300 Homeodomain-like/winged-helix DNA-binding family protein Chromosome_1 - View
Theobroma cacao Thecc.02G118200 Telomere repeat binding factor 1 Chromosome_2 - View
Tripterygium wilfordii TWI59G0349 NC_052248.1 - View
Tripterygium wilfordii TWI14G1140 NC_052249.1 - View
Vitis vinifera GSVIVG01037816001 chr3 - View