Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0005615 PREDICTED: uncharacterized protein LOC100243147 [Vitis vinifera] Chr11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr8.1664 chr8 + View
Acer truncatum Atru.chr3.3397 chr3 + View
Actinidia chinensis Actinidia24175 Lachesis_group24 - View
Actinidia chinensis Actinidia07206 Lachesis_group13 - View
Actinidia chinensis Actinidia03681 Lachesis_group9 + View
Arabidopsis lyrata AL6G33760 scaffold_6 + View
Avicennia marina MSTRG.21070 ScioBoG_26769_HRSCAF_26899 + View
Avicennia marina MSTRG.5801 ScioBoG_102839_HRSCAF_103093 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A1GHB6 PTHR22880:SF167 - DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.C1UQYX K02527 - 3-deoxy-D-manno-octulosonic-acid transferase (kdtA, waaA) arahy.Tifrunner.gnm1.Arahy.12 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UY40LW PTHR22880:SF167 - DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.42C0B0 K02527 - 3-deoxy-D-manno-octulosonic-acid transferase (kdtA, waaA) arahy.Tifrunner.gnm1.Arahy.02 + View
Arabidopsis thaliana AT5G22760 PHD finger family protein PHD finger family protein%3B FUNCTIONS IN: DNA binding%2C zinc ion binding%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022)%2C Zinc finger%2C PHD-type%2C conserved site (InterPro:IPR019786)%2C EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C DDT domain superfamily (InterPro:IPR018501)%2C DDT domain%2C subgroup (InterPro:IPR018500)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%2C Zinc finger%2C PHD-finger (InterPro:IPR019787)%3B BEST Arabidopsis thaliana protein match is: metalloendopeptidases%3Bzinc ion binding%3BDNA binding (TAIR:AT5G35210.2)%3B Has 3640 Blast hits to 3265 proteins in 204 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2369%3B Fungi - 398%3B Plants - 598%3B Viruses - 0%3B Other Eukaryotes - 275 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB05g22698 ChrB05 - View
Brassica carinata BcaC03g13911 ChrC03 + View
Brassica napus BNapus_Darmor_BZH_scaffold_38p00420 BNapus_Darmor_BZH_scaffold_38 - View
Brassica napus C02p11190 C02 + View
Brassica oleracea BolC2t07191H C2 + View
Brassica rapa BraA02t05684Z A02 + View
Beta vulgaris EL10Ac9g21057 PTHR22880//PTHR22880:SF167 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED Chr9_EL10_PGA_scaffold8 - View
Capsicum annuum CAN.G644.40 PGAv.1.6.scaffold644 + View
Capsicum annuum CAN.G919.4 PGAv.1.6.scaffold919 - View
Cicer arietinum L. Ca_19363_v3 Ca_LG6_v3 - View
Cicer arietinum L. Ca_11617_v3 Ca_LG4_v3 - View
Cicer arietinum L. Ca_01686_v3 Ca_LG1_v3 + View
Corylus avellana Haze_23465 Similar to PTM: DDT domain-containing protein PTM (Arabidopsis thaliana OX%3D3702) 6 + View
Coffea canephora Cc01_g09930 Putative PHD finger family protein chr1 + View
Citrus clementina Ciclev10013092m.g scaffold_6 + View
Citrus clementina Ciclev10027677m.g scaffold_8 + View
Ceratophyllum demersum CDE02G1918 1 + View
Ceratophyllum demersum CDE06G0794 4 + View
Carpinus fangiana Cfa010099 Cfa04 + View
Cardamine hirsuta CARHR190830 PHD finger family protein Chr6 - View
Carya illinoinensis CiPaw.09G007400 2.4.99.12//2.4.99.13 - Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase / Lipid IV(A) KDO transferase // (Kdo)-lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase / Kdo transferase Chr09 - View
Carya illinoinensis CiPaw.13G141900 PTHR22880:SF167 - DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED Chr13 + View
Carya illinoinensis CiPaw.10G004200 K02527 - 3-deoxy-D-manno-octulosonic-acid transferase (kdtA, waaA) Chr10 - View
Carya illinoinensis CiPaw.14G104300 PF00628//PF02791//PF15612 - PHD-finger (PHD) // DDT domain (DDT) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) Chr14 + View
Citrullus lanatus ClCG04G009690 3-deoxy-d-manno-octulosonic-acid transferase, putative CG_Chr04 - View
Citrullus lanatus ClCG02G021830 DNA binding and zinc-finger domain-containing protein CG_Chr02 - View
Cucumis melo MELO3C024510.2 3-deoxy-d-manno-octulosonic-acid transferase, putative chr08 + View
Cucumis melo MELO3C021462.2 DDT domain-containing protein PTM chr11 - View
Carica papaya Cpa.g.sc5.99 supercontig_5 + View
Chenopodium quinoa AUR62031754 PTM: DDT domain-containing protein PTM C_Quinoa_Scaffold_1895 + View
Chenopodium quinoa AUR62023958 PTM: DDT domain-containing protein PTM C_Quinoa_Scaffold_3389 + View
Capsella rubella Carub.0005s1053 PTHR22880:SF167 - DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED scaffold_5 + View
Capsella rubella Carub.0006s0268 2.4.99.12 - Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase / Lipid IV(A) KDO transferase scaffold_6 + View
Capsella rubella Carub.0006s2047 PTHR22880:SF167 - DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED scaffold_6 + View
Cucumis sativus L. CsaV3_6G040350 3-deoxy-D-manno-octulosonic-acid transferase chr6 - View
Cucumis sativus L. CsaV3_6G014620 DDT domain-containing protein PTM chr6 - View
Daucus carota DCAR_018746 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_006144 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv29413 GWHABJS00000007 + View
Davidia involucrata Dinv12534 GWHABJS00000010 + View
Durio zibethinus Duzib168G2332 NW_019168159.1 + View
Erigeron canadensis ECA248G1880 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA248G2284 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.A01566 Chr01 - View
Eucalyptus grandis Eucgr.J00416 Chr10 - View
Erythranthe guttata Migut.D02327 scaffold_4 - View
Erythranthe guttata Migut.N02523 scaffold_14 + View
Eutrema salsugineum Thhalv10012428m.g PTHR22880:SF167 - DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED scaffold_2 + View
Fragaria x ananassa FAN05G3053 K02527 - 3-deoxy-D-manno-octulosonic-acid transferase (kdtA, waaA) Fvb6-3 + View
Fragaria x ananassa FAN21G2146 PTHR22880:SF167 - DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED Fvb3-2 - View
Fragaria x ananassa FAN11G4030 PTHR22880//PTHR22880:SF167 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED Fvb3-4 + View
Fragaria x ananassa FAN16G2071 PTHR22880//PTHR22880:SF167 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED Fvb3-3 - View
Fragaria vesca FvH4_3g30100 PTHR22880:SF167 - DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED Fvb3 - View
Gossypium hirsutum Gohir.A09G092100 PTHR22880:SF167 - DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED A09 - View
Gossypium hirsutum Gohir.D09G091966 PTHR22880:SF167 - DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED D09 - View
Glycine max Glyma.12G180700 PTHR22880:SF167 - DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED Gm12 - View
Glycine max Glyma.13G150200 2.4.99.12 - Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase / Lipid IV(A) KDO transferase Gm13 - View
Glycine max Glyma.11G190000 PTHR22880:SF167 - DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED Gm11 + View
Glycine max Glyma.13G320100 KOG1473 - Nucleosome remodeling factor, subunit NURF301/BPTF Gm13 + View
Glycine max Glyma.12G084300 PF00628//PF02791 - PHD-finger (PHD) // DDT domain (DDT) Gm12 - View
Gossypium raimondii Gorai.006G108600 Chr06 - View
Lupinus albus Lalb_Chr01g0004711 PTHR22880//PTHR22880:SF167 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED Lalb_Chr01 - View
Lupinus albus Lalb_Chr03g0027881 PTHR22880//PTHR22880:SF167 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED Lalb_Chr03 - View
Lotus japonicus Lj3g0003552 PTHR22880//PTHR22880:SF167 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED chr3 - View
Lonicera japonica Lj1C219T5 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_1_61921 Lsat_1_v8_lg_1 + View
Lactuca sativa Lsat_1_v5_gn_1_50640 K02527 - 3-deoxy-D-manno-octulosonic-acid transferase (kdtA, waaA) Lsat_1_v8_lg_1 - View
Malus domestica MD03G1132800 PHD finger family protein Chr03 - View
Malus domestica MD11G1155100 PHD finger family protein Chr11 - View
Manihot esculenta Manes.11G155800 Chromosome11 - View
Manihot esculenta Manes.08G018900 Chromosome08 - View
Manihot esculenta Manes.04G010300 Chromosome04 + View
Medicago truncatula Medtr4g055900 hypothetical protein chr4 + View
Medicago truncatula Medtr2g084615 DNA-binding and zinc-finger protein chr2 - View
Nelumbo nucifera Nn2g13967 chr2 - View
Nicotiana tabacum Nitab4.5_0003470g0010 DDT domain superfamily, Zinc finger, PHD-finger, DDT domain, subgroup, Zinc finger, PHD-type, conserved site, Zinc finger, PHD-type, Zinc finger, FYVE/PHD-type, Zinc finger, RING/FYVE/PHD-type, DDT domain Nitab4.5_0003470 + View
Olea europaea Oeu035532.1 chr11 - View
Oryza sativa ssp. japonica Os01g0857300 Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain containing protein. chr01 - View
Oryza sativa ssp. japonica Os11g0148700 Zinc finger, RING/FYVE/PHD-type domain containing protein. chr11 - View
Petunia axillaris Peaxi162Scf00789g00216 Chromodomain-helicase-DNA-binding protein Mi-2, putative isoform 1 Peaxi162Scf00789 - View
Petunia axillaris Peaxi162Scf00110g01214 3-deoxy-D-manno-octulosonic acid transferase Peaxi162Scf00110 - View
Petunia axillaris Peaxi162Scf00157g00417 PHD type transcription factor with transmembrane domain protein Peaxi162Scf00157 - View
Punica granatum PGR119G0461 NC_045132.1 + View
Prunus persica Prupe.6G117600 PTHR22880:SF167 - DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED Pp06 - View
Pisum sativum Psat5g255240 DDT domain chr5LG3 - View
Papaver somniferum PSO063G2793 NC_039364.1 - View
Papaver somniferum PSO339G3022 NC_039366.1 - View
Populus trichocarpa Potri.009G150200 PTHR22880:SF167 - DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED Chr09 + View
Populus trichocarpa Potri.004G189600 PTHR22880:SF167 - DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED Chr04 + View
Phaseolus vulgaris Phvul.005G128100 Chr05 + View
Phaseolus vulgaris Phvul.011G089300 Chr11 - View
Quercus lobata QL07p040881 7 + View
Quercus lobata QL01p014004 1 + View
Rosa chinensis RcHm_v2.0_Chr5g0055621 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim01G0209200 chr01 + View
Rhododendron simsii Rhsim13G0104700 chr13 - View
Striga asiatica SGA_v2.0_scaffold27G11600 scaffold27 - View
Salix brachista Sabra04G0128400 GWHAAZH00000004 - View
Salix brachista Sabra09G0118900 GWHAAZH00000009 + View
Simmondsia chinensis Sc21g0004650 GWHAASQ00000021 - View
Simmondsia chinensis Sc02g0001220 GWHAASQ00000002 + View
Simmondsia chinensis Sc12g0003890 GWHAASQ00000012 - View
Sechium edule Sed0012062 LG14 + View
Sechium edule Sed0012905 LG01 - View
Solanum lycopersicum Solyc10g083710.2 3-deoxy-D-manno-octulosonic-acid transferase (AHRD V3.3 *** A0A200R573_9MAGN) SL4.0ch10 + View
Solanum lycopersicum Solyc06g074640.2 PHD finger family protein (AHRD V3.3 *** F4KBB1_ARATH) SL4.0ch06 + View
Solanum lycopersicum Solyc11g066780.3 PHD finger family protein (AHRD V3.3 *** A0A2U1MW38_ARTAN) SL4.0ch11 - View
Schrenkiella parvula Sp6g22660 PTHR22880//PTHR22880:SF167 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED ch6-6 - View
Schrenkiella parvula Sp5g16400 PTHR22880//PTHR22880:SF167 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // DNA BINDING AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED ch5-1 - View
Solanum pennellii Sopen10g033180 Encodes a putative KDO (3-deoxy-D-manno-octulosonate) transferase | KDO transferase A (KDTA) | FUNCTIONS IN: transferase activity, transferring glycosyl groups | INVOLVED IN: biosynthetic process, carbohydrate metabolic process | LOCATED IN: mitochondrion | EXPRESSED IN: 8 plant structures | EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage | CONTAINS InterPro DOMAIN/s: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal Spenn-ch10 + View
Solanum pennellii Sopen11g026500 PHD finger family protein | FUNCTIONS IN: DNA binding, zinc ion binding | INVOLVED IN: regulation of transcription, DNA-dependent | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: DDT domain , Zinc finger, PHD-type, conserved site , EF-Hand 1, calcium-binding site , Zinc finger, PHD-type , DDT domain superfamily , DDT domain, subgroup , Zinc finger, FYVE/PHD-type , Zinc finger, PHD-finger | BEST Arabidopsis thaliana protein match is: metalloendopeptidases, zinc ion binding, DNA binding Spenn-ch11 - View
Solanum pennellii Sopen06g031060 PHD finger family protein | FUNCTIONS IN: DNA binding, zinc ion binding | INVOLVED IN: regulation of transcription, DNA-dependent | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: DDT domain , Zinc finger, PHD-type, conserved site , EF-Hand 1, calcium-binding site , Zinc finger, PHD-type , DDT domain superfamily , DDT domain, subgroup , Zinc finger, FYVE/PHD-type , Zinc finger, PHD-finger | BEST Arabidopsis thaliana protein match is: metalloendopeptidases, zinc ion binding, DNA binding Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400028176 3-deoxy-d-manno-octulosonic-acid transferase ST4.03ch10 - View
Solanum tuberosum PGSC0003DMG400007126 DNA binding protein ST4.03ch06 + View
Selenicereus undatus Hund07715 Scaffold_33676 + View
Trochodendron aralioides TAR633G1314 group2 + View
Trochodendron aralioides TAR623G1731 group7 + View
Theobroma cacao Thecc.05G079000 3-deoxy-d-manno-octulosonic-acid transferase Chromosome_5 - View
Theobroma cacao Thecc.09G293200 Chromodomain-helicase-DNA-binding protein Mi-2 Chromosome_9 + View
Tarenaya hassleriana THA.LOC104799531 DDT domain-containing protein PTM NW_010968505.1 - View
Trifolium pratense TPR.G32362 Tp57577_TGAC_v2_scaf_195 - View
Tripterygium wilfordii TWI53G1380 NC_052244.1 + View
Tripterygium wilfordii TWI79G1536 NC_052238.1 - View
Tripterygium wilfordii TWI75G0682 NC_052253.1 - View
Vaccinium macrocarpon vmacro03225 Similar to PTM: DDT domain-containing protein PTM (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro14380 Similar to PTM: DDT domain-containing protein PTM (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1127G0568 CM024076.1 - View
Vigna mungo VMungo1080G0366 CM024079.1 - View
Vitis vinifera GSVIVG01031411001 chr6 - View