Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G29410 LG-1 - View
Acer truncatum Atru.chr5.1295 chr5 - View
Actinidia chinensis Actinidia24289 Lachesis_group24 - View
Actinidia chinensis Actinidia00706 Lachesis_group19 + View
Arabidopsis lyrata AL4G47580 scaffold_4 - View
Aquilegia oxysepala Aqoxy2G03155 CHR02 - View
Arabidopsis thaliana AT2G47990 transducin family protein / WD-40 repeat family protein Encodes a transducin family nucleolar protein with six WD40 repeats that is most likely involved in 18S rRNA biogenesis. The slow progression of the gametophytic division cycles in swa1 suggested that the SWA1 protein is required for the normal progression of mitotic division cycles through the regulation of cell metabolism. Ubiquitously expressed throughout the plant. SLOW WALKER1 (SWA1)%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C U3 small nucleolar RNA-associated protein 15%2C C-terminal (InterPro:IPR018983)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1)%3B Has 33528 Blast hits to 20320 proteins in 654 species: Archae - 34%3B Bacteria - 4945%3B Metazoa - 12077%3B Fungi - 7782%3B Plants - 4404%3B Viruses - 6%3B Other Eukaryotes - 4280 (source: NCBI BLink). Chr2 - View
Cannabis sativa CANSAT25G0498 NC_044370.1 + View
Cicer arietinum L. Ca_10382_v3 Ca_LG4_v3 - View
Coffea canephora Cc01_g20090 Putative U3 small nucleolar RNA-associated protein 15 homolog chr1 + View
Citrus clementina Ciclev10019671m.g scaffold_3 + View
Cardamine hirsuta CARHR143370 U3 small nucleolar RNA-associated protein, putative Chr4 - View
Carya illinoinensis CiPaw.07G098400 K14549 - U3 small nucleolar RNA-associated protein 15 (UTP15) Chr07 + View
Cucumis melo MELO3C015885.2 protein SLOW WALKER 1 chr01 + View
Corchorus olitorius COL.COLO4_08045 hypothetical protein AWUE01013554.1 - View
Carica papaya Cpa.g.sc9.148 supercontig_9 + View
Capsella rubella Carub.0004s3071 K14549 - U3 small nucleolar RNA-associated protein 15 (UTP15) scaffold_4 - View
Cucumis sativus L. CsaV3_7G028370 U3 small nucleolar RNA-associated protein 15-like protein chr7 - View
Daucus carota DCAR_018371 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv11286 GWHABJS00000007 - View
Durio zibethinus Duzib211G0556 NW_019168049.1 - View
Erigeron canadensis ECA248G0063 Conyza_canadensis_scaffold:9 - View
Erythranthe guttata Migut.N02122 scaffold_14 - View
Eutrema salsugineum Thhalv10001392m.g K14549 - U3 small nucleolar RNA-associated protein 15 (UTP15) scaffold_22 - View
Gossypium hirsutum Gohir.D08G054000 K14549 - U3 small nucleolar RNA-associated protein 15 (UTP15) D08 - View
Gossypium hirsutum Gohir.A08G044300 K14549 - U3 small nucleolar RNA-associated protein 15 (UTP15) A08 - View
Glycine max Glyma.02G151500 K14549 - U3 small nucleolar RNA-associated protein 15 (UTP15) Gm02 + View
Glycine max Glyma.10G022600 K14549 - U3 small nucleolar RNA-associated protein 15 (UTP15) Gm10 - View
Lupinus albus Lalb_Chr02g0143021 K14549 - U3 small nucleolar RNA-associated protein 15 (UTP15) Lalb_Chr02 + View
Lotus japonicus Lj5g0002288 K14549 - U3 small nucleolar RNA-associated protein 15 (UTP15) chr5 + View
Lonicera japonica Lj1C40T13 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_5_189761 K14549 - U3 small nucleolar RNA-associated protein 15 (UTP15) Lsat_1_v8_lg_5 - View
Malus domestica MD03G1274200 transducin family protein / WD-40 repeat family protein Chr03 + View
Malus domestica MD11G1296600 transducin family protein / WD-40 repeat family protein Chr11 + View
Medicago truncatula Medtr1g089260 U3 small nucleolar RNA-associated protein, putative chr1 - View
Nicotiana tabacum Nitab4.5_0001651g0120 WD40 repeat, G-protein beta WD-40 repeat, WD40-repeat-containing domain, U3 small nucleolar RNA-associated protein 15, C-terminal, WD40/YVTN repeat-like-containing domain Nitab4.5_0001651 - View
Olea europaea Oeu047906.1 scaffold505 + View
Petunia axillaris Peaxi162Scf00017g00211 U3 small nucleolar RNA-associated protein 15 homolog Peaxi162Scf00017 + View
Punica granatum PGR044G1528 NC_045134.1 + View
Pisum sativum Psat6g168560 UTP15 C terminal chr6LG2 + View
Populus trichocarpa Potri.014G135600 K14549 - U3 small nucleolar RNA-associated protein 15 (UTP15) Chr14 - View
Populus trichocarpa Potri.002G213500 K14549 - U3 small nucleolar RNA-associated protein 15 (UTP15) Chr02 + View
Phaseolus vulgaris Phvul.007G167300 K14549 - U3 small nucleolar RNA-associated protein 15 (UTP15) Chr07 - View
Quercus lobata QL12p023536 12 - View
Rhododendron simsii Rhsim13G0018400 chr13 - View
Striga asiatica SGA_v2.0_scaffold172G39056 scaffold172 + View
Salix brachista Sabra14G0102000 GWHAAZH00000014 - View
Sechium edule Sed0004423 LG07 + View
Sechium edule Sed0004995 LG09 + View
Schrenkiella parvula Sp4g29910 K14549 - U3 small nucleolar RNA-associated protein 15 (UTP15) ch4-6 - View
Trochodendron aralioides TAR362G0205 group17 - View
Theobroma cacao Thecc.01G288500 Transducin family protein / WD-40 repeat family protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104802213 protein SLOW WALKER 1 NW_010970490.1 - View
Trifolium pratense TPR.G16943 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI59G1451 NC_052248.1 - View
Vaccinium macrocarpon vmacro02516 Similar to SWA1: Protein SLOW WALKER 1 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G2755 CM024071.1 + View
Vitis vinifera GSVIVG01011022001 chr7 + View