Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G1130 LG-8 - View
Acer truncatum Atru.chr1.3808 chr1 - View
Actinidia chinensis Actinidia32167 Lachesis_group27 - View
Arabidopsis lyrata AL3G26120 scaffold_3 - View
Avicennia marina MSTRG.22562 ScioBoG_3703_HRSCAF_3719 + View
Amaranthus hybridus Ah.08g216510 AmaHy_arrow1_Scaffold_8 + View
Arabidopsis thaliana AT3G13940 DNA binding / DNA-directed RNA polymerase DNA binding%3BDNA-directed RNA polymerases%3B FUNCTIONS IN: DNA-directed RNA polymerase activity%2C DNA binding%3B INVOLVED IN: transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA polymerase I associated factor%2C A49-like (InterPro:IPR009668)%3B Has 222 Blast hits to 222 proteins in 107 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 66%3B Fungi - 105%3B Plants - 33%3B Viruses - 0%3B Other Eukaryotes - 16 (source: NCBI BLink). Chr3 - View
Brassica napus A01p39710 A01 + View
Brassica napus C01p50660 C01 + View
Brassica rapa BraA01t04010Z A01 + View
Cannabis sativa CANSAT56G1493 NC_044371.1 - View
Coffea canephora Cc04_g01610 Putative DNA-directed RNA polymerase I subunit rpa49 chr4 + View
Citrus clementina Ciclev10025597m.g scaffold_7 - View
Cardamine hirsuta CARHR088750 DNA-directed RNA polymerase I subunit rpa49 Chr3 - View
Citrullus lanatus ClCG09G000840 DNA-directed RNA polymerase I subunit rpa49 CG_Chr09 - View
Cucumis melo MELO3C024372.2 DNA-directed RNA polymerase I subunit rpa49 chr01 + View
Carica papaya Cpa.g.sc25.86 supercontig_25 - View
Chenopodium quinoa AUR62009860 rpa49: DNA-directed RNA polymerase I subunit rpa49 C_Quinoa_Scaffold_2493 + View
Capsella rubella Carub.0003s1351 K03005 - DNA-directed RNA polymerase I subunit RPA49 (RPA49, POLR1E) scaffold_3 - View
Cucumis sativus L. CsaV3_7G034640 DNA-directed RNA polymerase I subunit rpa49 chr7 + View
Daucus carota DCAR_026403 hypothetical protein DCARv2_Chr7 + View
Davidia involucrata Dinv30366 GWHABJS00000019 + View
Eucalyptus grandis Eucgr.F03167 Chr06 - View
Erythranthe guttata Migut.D00948 scaffold_4 + View
Eutrema salsugineum Thhalv10020760m.g K03005 - DNA-directed RNA polymerase I subunit RPA49 (RPA49, POLR1E) scaffold_13 + View
Fragaria x ananassa FAN14G2695 K03005 - DNA-directed RNA polymerase I subunit RPA49 (RPA49, POLR1E) Fvb6-1 + View
Fragaria x ananassa FAN05G5343 K03005 - DNA-directed RNA polymerase I subunit RPA49 (RPA49, POLR1E) Fvb6-3 + View
Fragaria x ananassa FAN02G3564 K03005 - DNA-directed RNA polymerase I subunit RPA49 (RPA49, POLR1E) Fvb6-4 - View
Fragaria x ananassa FAN09G2135 K03005 - DNA-directed RNA polymerase I subunit RPA49 (RPA49, POLR1E) Fvb6-2 + View
Fragaria vesca FvH4_6g34180 K03005 - DNA-directed RNA polymerase I subunit RPA49 (RPA49, POLR1E) Fvb6 - View
Helianthus annuus HanXRQChr10g0312341 Probable DNA binding;DNA-directed RNA polymerases HanXRQChr10 + View
Hydrangea macrophylla Hma1.2p1_0496F.1_g166100 Hma1.2p1_0496F.1 - View
Lonicera japonica Lj5A40G74 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_5_135221 Lsat_1_v8_lg_5 + View
Malus domestica MD09G1187900 DNA binding Chr09 + View
Malus domestica MD17G1172300 DNA binding Chr17 + View
Manihot esculenta Manes.04G142200 Chromosome04 - View
Manihot esculenta Manes.11G023100 Chromosome11 + View
Olea europaea Oeu027301.1 chr2 - View
Punica granatum PGR119G1065 NC_045132.1 - View
Prunus persica Prupe.3G044800 K03005 - DNA-directed RNA polymerase I subunit RPA49 (RPA49, POLR1E) Pp03 + View
Populus trichocarpa Potri.001G198600 K03005 - DNA-directed RNA polymerase I subunit RPA49 (RPA49, POLR1E) Chr01 - View
Quercus lobata QL05p009436 5 + View
Rosa chinensis RcHm_v2.0_Chr2g0144531 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim08G0236100 chr08 - View
Simmondsia chinensis Sc12g0010440 GWHAASQ00000012 - View
Sechium edule Sed0020704 LG04 + View
Sechium edule Sed0007780 LG09 + View
Schrenkiella parvula Sp3g12180 K03005 - DNA-directed RNA polymerase I subunit RPA49 (RPA49, POLR1E) ch3-1 - View
Selenicereus undatus Hund20819 Scaffold_33673 - View
Vaccinium macrocarpon vmacro22224 Similar to rpa49: DNA-directed RNA polymerase I subunit rpa49 (Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX%3D284812) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01016817001 chr9 - View