Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0048775 PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 [Vitis vinifera] Chr12 + View
CSS0029596 PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 [Vitis vinifera] Contig294 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr7.2310 chr7 - View
Actinidia chinensis Actinidia13295 Lachesis_group18 + View
Actinidia chinensis Actinidia13422 Lachesis_group12 + View
Arabidopsis lyrata AL6G37390 scaffold_6 + View
Avicennia marina MSTRG.25883 ScioBoG_4119_HRSCAF_4138 + View
Avicennia marina MSTRG.14006 ScioBoG_18778_HRSCAF_18863 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.76R4TT PTHR21319:SF15 - CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.4I93G7 K10144 - RING finger and CHY zinc finger domain-containing protein 1 (RCHY1, PIRH2) arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.4QCN9H PF13639//PF14599 - Ring finger domain (zf-RING_2) // Zinc-ribbon (zinc_ribbon_6) arahy.Tifrunner.gnm1.Arahy.18 - View
Arabidopsis thaliana AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein CHY-type/CTCHY-type/RING-type Zinc finger protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CTCHY-type (InterPro:IPR017921)%2C Zinc finger%2C CHY-type (InterPro:IPR008913)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: CHY-type/CTCHY-type/RING-type Zinc finger protein (TAIR:AT5G22920.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). CHY-type/CTCHY-type/RING-type Zinc finger protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CTCHY-type (InterPro:IPR017921)%2C Zinc finger%2C CHY-type (InterPro:IPR008913)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: CHY-type/CTCHY-type/RING-type Zinc finger protein (TAIR:AT5G22920.1). Chr5 + View
Brassica carinata BcaB07g29990 ChrB07 - View
Brassica napus C02p59440 C02 - View
Brassica napus A02p39650 A02 - View
Brassica rapa BraA02t08931Z A02 - View
Beta vulgaris EL10Ac2g02530 PTHR21319:SF15 - CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN Chr2_EL10_PGA_scaffold6 - View
Cicer arietinum L. Ca_12901_v3 Ca_LG4_v3 - View
Corylus avellana Haze_21645 Similar to RZFP34: Probable E3 ubiquitin-protein ligase RZFP34 (Oryza sativa subsp. japonica OX%3D39947) 3 + View
Coffea canephora Cc08_g08180 Putative RING finger and CHY zinc finger domain-containing protein 1 chr8 - View
Citrus clementina Ciclev10008946m.g scaffold_1 + View
Cardamine hirsuta CARHR187810 RING finger and CHY zinc finger domain-containing protein Chr6 - View
Carya illinoinensis CiPaw.07G216800 PTHR21319//PTHR21319:SF15 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN Chr07 - View
Carya illinoinensis CiPaw.08G016600 PTHR21319//PTHR21319:SF15 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN Chr08 + View
Citrullus lanatus ClCG05G017270 RING finger and CHY zinc finger domain-containing protein CG_Chr05 + View
Cucumis melo MELO3C003660.2 RING finger and CHY zinc finger protein chr04 - View
Chenopodium quinoa AUR62032388 MIEL1: E3 ubiquitin-protein ligase MIEL1 C_Quinoa_Scaffold_4087 + View
Chenopodium quinoa AUR62024827 MIEL1: E3 ubiquitin-protein ligase MIEL1 C_Quinoa_Scaffold_1516 - View
Capsella rubella Carub.0006s2343 PTHR21319:SF15 - CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN scaffold_6 + View
Cucumis sativus L. CsaV3_3G046770 RING finger and CHY zinc finger protein chr3 + View
Davidia involucrata Dinv30233 GWHABJS00000003 - View
Davidia involucrata Dinv35872 GWHABJS00000017 - View
Durio zibethinus Duzib187G1791 NW_019167860.1 + View
Eucalyptus grandis Eucgr.C02874 Chr03 + View
Eucalyptus grandis Eucgr.C01569 Chr03 - View
Eutrema salsugineum Thhalv10004654m.g PTHR21319:SF15 - CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN scaffold_6 + View
Fragaria x ananassa FAN24G0188 PTHR21319:SF15 - CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN Fvb2-2 - View
Fragaria x ananassa FAN20G2383 PTHR21319//PTHR21319:SF15 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN Fvb2-3 - View
Fragaria x ananassa FAN15G1305 K10144 - RING finger and CHY zinc finger domain-containing protein 1 (RCHY1, PIRH2) Fvb2-4 + View
Fragaria x ananassa FAN27G0502 K10144 - RING finger and CHY zinc finger domain-containing protein 1 (RCHY1, PIRH2) Fvb2-1 + View
Fragaria vesca FvH4_2g30251 Fvb2 + View
Glycine max Glyma.06G074300 PTHR21319:SF15 - CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN Gm06 + View
Glycine max Glyma.17G202700 PTHR21319:SF15 - CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN Gm17 - View
Glycine max Glyma.04G073150 PTHR21319:SF15 - CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN Gm04 + View
Hydrangea macrophylla Hma1.2p1_0140F.1_g063840 Hma1.2p1_0140F.1 - View
Lupinus albus Lalb_Chr14g0362021 PTHR21319:SF15 - CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN Lalb_Chr14 + View
Lotus japonicus Lj5g0000420 PTHR21319//PTHR21319:SF15 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN chr5 - View
Lotus japonicus Lj1g0013798 PTHR21319//PTHR21319:SF15 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 // CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN chr1 - View
Lonicera japonica Lj7A710T61 GWHAAZE00000007 - View
Malus domestica MD08G1135100 CHY-type/CTCHY-type/RING-type Zinc finger protein Chr08 - View
Malus domestica MD15G1113900 CHY-type/CTCHY-type/RING-type Zinc finger protein Chr15 - View
Medicago truncatula Medtr3g108240 CHY and CTCHY and RING-type zinc finger protein chr3 + View
Medicago truncatula Medtr1g010150 CHY and CTCHY and RING-type zinc finger protein chr1 - View
Nicotiana tabacum Nitab4.5_0000250g0030 Unknown Nitab4.5_0000250 + View
Olea europaea Oeu031565.1 scaffold262 + View
Petunia axillaris Peaxi162Scf00105g01114 CHY-type/CTCHY-type/RING-type Zinc finger protein Peaxi162Scf00105 - View
Punica granatum PGR044G0787 NC_045134.1 - View
Punica granatum PGR031G3641 NC_045127.1 - View
Populus trichocarpa Potri.006G245400 PTHR21319:SF15 - CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN Chr06 - View
Phaseolus vulgaris Phvul.001G056750 Chr01 - View
Phaseolus vulgaris Phvul.009G099000 Chr09 + View
Quercus lobata QL12p031044 12 - View
Rosa chinensis RcHm_v2.0_Chr6g0312621 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim02G0186800 chr02 - View
Striga asiatica SGA_v2.0_scaffold169G38637 scaffold169 + View
Salix brachista Sabra06G0192100 GWHAAZH00000006 - View
Simmondsia chinensis Sc23g0005830 GWHAASQ00000023 + View
Sechium edule Sed0023850 LG13 + View
Sechium edule Sed0014790 LG05 - View
Solanum lycopersicum Solyc08g067960.3 CHY-type/CTCHY-type/RING-type Zinc finger protein (AHRD V3.3 *** A0A2U1Q2D4_ARTAN) SL4.0ch08 + View
Schrenkiella parvula Sp2g21970 PTHR21319:SF15 - CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN ch2-4 - View
Solanum tuberosum PGSC0003DMG400014487 Zinc finger family protein ST4.03ch08 + View
Selenicereus undatus Hund03000 Scaffold_19641 - View
Trochodendron aralioides TAR383G1104 group10 + View
Trochodendron aralioides TAR624G0495 group9 - View
Tarenaya hassleriana THA.LOC104815047 E3 ubiquitin-protein ligase MIEL1-like NW_010965541.1 + View
Tripterygium wilfordii TWI34G0638 NC_052235.1 + View
Vaccinium macrocarpon vmacro05464 Similar to RZFP34: Probable E3 ubiquitin-protein ligase RZFP34 (Oryza sativa subsp. japonica OX%3D39947) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro11108 Similar to RZFP34: Probable E3 ubiquitin-protein ligase RZFP34 (Oryza sativa subsp. japonica OX%3D39947) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G0034 CM024072.1 - View
Vitis vinifera GSVIVG01035743001 chr4 + View