Gene: Solyc08g067960.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g067960.3
  • Transcript Identifier Solyc08g067960.3.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 55118717-55121446 : positive

Gene Family Information

  • ID HOM05D000548
  • #Genes/#Species 997/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g067960.3.1
  • uniprot A0A3Q7HPK6
  • gene_id Solyc08g067960

Descriptions

  • Description CHY-type/CTCHY-type/RING-type Zinc finger protein (AHRD V3.3 *** A0A2U1Q2D4_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IBA
GOA Databaseubiquitin-dependent protein catabolic process
GO:0016567
IBA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0061630
IBA
GOA Databaseubiquitin protein ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039512 RCHY1, zinc-ribbon
IPR037275 Zinc finger, CTCHY-type superfamily
IPR037274 Zinc finger, CHY-type superfamily
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR008913 Zinc finger, CHY-type
Mapman id Description
35.1 not assigned.annotated