Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0033077 PREDICTED: sigma factor binding protein 1, chloroplastic-like [Nelumbo nucifera] Chr13 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr1.1439 chr1 + View
Actinidia chinensis Actinidia01827 Lachesis_group5 + View
Aquilegia oxysepala Aqoxy2G00396 CHR02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.C03B5F PTHR33624:SF2 - SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC-RELATED arahy.Tifrunner.gnm1.Arahy.16 - View
Arabidopsis thaliana AT2G41180 VQ motif-containing protein VQ motif-containing protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889)%3B BEST Arabidopsis thaliana protein match is: sigma factor binding protein 1 (TAIR:AT3G56710.1)%3B Has 49 Blast hits to 49 proteins in 11 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 49%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr2 + View
Cicer arietinum L. Ca_08391_v3 Ca_LG3_v3 + View
Corylus avellana Haze_20227 Similar to SIB1: Sigma factor binding protein 1, chloroplastic (Arabidopsis thaliana OX%3D3702) 10 - View
Coffea canephora Cc06_g19310 Putative Predicted protein chr6 + View
Carpinus fangiana Cfa020005 Cfa08 + View
Cardamine hirsuta CARHR136270 sigma factor binding protein 1 Chr4 + View
Carya illinoinensis CiPaw.10G040200 PTHR33624:SF2 - SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC-RELATED Chr10 - View
Carya illinoinensis CiPaw.09G047800 PTHR33624:SF2 - SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC-RELATED Chr09 - View
Citrullus lanatus ClCG10G016220 sigma factor binding protein 1 LENGTH=151 CG_Chr10 + View
Cucumis melo MELO3C009755.2 Sigma factor binding protein 1, chloroplastic chr04 + View
Cucumis melo MELO3C019076.2 Sigma factor binding protein 1, chloroplastic chr08 - View
Carica papaya Cpa.g.sc5.168 supercontig_5 + View
Capsella rubella Carub.0004s2349 PTHR33624:SF2 - SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC-RELATED scaffold_4 + View
Cucumis sativus L. CsaV3_4G029660 sigma factor binding protein 2, chloroplastic chr4 + View
Cucumis sativus L. CsaV3_3G040160 sigma factor binding protein 2, chloroplastic chr3 - View
Davidia involucrata Dinv12041 GWHABJS00000021 + View
Durio zibethinus Duzib114G0524 NW_019167926.1 + View
Durio zibethinus Duzib128G1163 NW_019168481.1 - View
Eucalyptus grandis Eucgr.A02242 Chr01 + View
Erythranthe guttata Migut.J01657 scaffold_10 + View
Erythranthe guttata Migut.K00136 scaffold_11 - View
Eutrema salsugineum Thhalv10017346m.g PTHR33624:SF2 - SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC-RELATED scaffold_10 + View
Gossypium hirsutum Gohir.A11G307100 PTHR33624:SF2 - SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC-RELATED A11 + View
Glycine max Glyma.19G130400 PTHR33624:SF2 - SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC-RELATED Gm19 + View
Glycine max Glyma.03G127800 PTHR33624:SF2 - SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC-RELATED Gm03 + View
Glycine max Glyma.13G193800 PF05678 - VQ motif (VQ) Gm13 - View
Lupinus albus Lalb_Chr22g0357431 PTHR33624:SF2 - SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC-RELATED Lalb_Chr22 - View
Lotus japonicus Lj3g0008937 PF05678 - VQ motif (VQ) chr3 + View
Lotus japonicus Lj1g0016303 PTHR33624//PTHR33624:SF2 - FAMILY NOT NAMED // SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC-RELATED chr1 - View
Malus domestica MD14G1088500 VQ motif-containing protein Chr14 - View
Manihot esculenta Manes.11G007000 Chromosome11 - View
Manihot esculenta Manes.09G004900 Chromosome09 + View
Manihot esculenta Manes.04G157400 Chromosome04 + View
Medicago truncatula Medtr7g089860 VQ motif protein chr7 + View
Olea europaea Oeu059346.1 chr9 - View
Punica granatum PGR031G3974 NC_045127.1 - View
Prunus persica Prupe.7G038200 PTHR33624:SF2 - SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC-RELATED Pp07 + View
Pisum sativum Psat3g078800 VQ motif chr3LG5 - View
Papaver somniferum PSO339G5722 NC_039366.1 - View
Papaver somniferum PSO384G2085 NC_039368.1 - View
Populus trichocarpa Potri.006G038900 PTHR33624:SF2 - SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC-RELATED Chr06 - View
Populus trichocarpa Potri.003G194700 PF05678 - VQ motif (VQ) Chr03 - View
Populus trichocarpa Potri.001G029700 PF05678 - VQ motif (VQ) Chr01 + View
Populus trichocarpa Potri.016G036600 PTHR33624:SF2 - SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC-RELATED Chr16 + View
Phaseolus vulgaris Phvul.005G024800 PF05678 - VQ motif (VQ) Chr05 - View
Phaseolus vulgaris Phvul.001G123400 PTHR33624:SF2 - SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC-RELATED Chr01 + View
Quercus lobata QL07p010402 7 - View
Rhododendron simsii Rhsim04G0111200 chr04 - View
Striga asiatica SGA_v2.0_scaffold105G30292 scaffold105 + View
Salvia bowleyana SalBow6G6653 GWHASIU00000002 + View
Salix brachista Sabra06G0026200 GWHAAZH00000006 - View
Salix brachista Sabra16G0038800 GWHAAZH00000016 + View
Simmondsia chinensis Sc10g0004500 GWHAASQ00000010 - View
Sechium edule Sed0012008 LG12 - View
Schrenkiella parvula Sp4g23480 PTHR33624:SF2 - SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC-RELATED ch4-6 + View
Trochodendron aralioides TAR623G1017 group7 - View
Trochodendron aralioides TAR633G1036 group2 + View
Theobroma cacao Thecc.05G134100 Chromosome_5 + View
Tripterygium wilfordii TWI53G1119 NC_052244.1 + View
Vigna mungo VMungo1080G0254 CM024079.1 + View
Vigna mungo VMungo1383G0235 CM024070.1 + View