Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0005047 PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like isoform X3 [Nicotiana sylvestris] Chr14 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G13770 LG-2 - View
Aethionema arabicum Aa31LG9G15500 LG-9 - View
Acer truncatum Atru.chr6.1521 chr6 - View
Actinidia chinensis Actinidia14780 Lachesis_group14 + View
Actinidia chinensis Actinidia18134 Lachesis_group13 + View
Actinidia chinensis Actinidia01320 Lachesis_group18 + View
Arabidopsis lyrata AL4G31560 scaffold_4 - View
Arabidopsis lyrata AL1G46370 scaffold_1 + View
Aquilegia oxysepala Aqoxy3G02185 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FGQF31 PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HIE0E0 PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED arahy.Tifrunner.gnm1.Arahy.15 - View
Arabidopsis thaliana AT2G35510 similar to RCD one 1 Encodes a WWE domain-containing protein with 76%25 similarity to RCD1. The protein also contains a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. similar to RCD one 1 (SRO1)%3B FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity%3B INVOLVED IN: in 6 processes%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: WWE domain (InterPro:IPR004170)%2C Poly(ADP-ribose) polymerase%2C catalytic domain (InterPro:IPR012317)%2C RST domain of plant C-terminal (InterPro:IPR022003)%3B BEST Arabidopsis thaliana protein match is: WWE protein-protein interaction domain protein family (TAIR:AT1G32230.3)%3B Has 207 Blast hits to 202 proteins in 27 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 34%3B Fungi - 0%3B Plants - 160%3B Viruses - 0%3B Other Eukaryotes - 13 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT1G32230 WWE protein-protein interaction domain protein family Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment%2C RCD1 is localized in the nucleus. Under high salt or oxidative stress%2C RCD1 is found not only in the nucleus but also in the cytoplasm. RADICAL-INDUCED CELL DEATH1 (RCD1)%3B CONTAINS InterPro DOMAIN/s: WWE domain (InterPro:IPR004170)%2C Poly(ADP-ribose) polymerase%2C catalytic domain (InterPro:IPR012317)%2C RST domain of plant C-terminal (InterPro:IPR022003)%3B BEST Arabidopsis thaliana protein match is: similar to RCD one 1 (TAIR:AT2G35510.1)%3B Has 179 Blast hits to 178 proteins in 19 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 7%3B Fungi - 0%3B Plants - 168%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB07g32898 ChrB07 + View
Brassica carinata BcaC05g27256 ChrC05 + View
Brassica carinata BcaB03g13750 ChrB03 - View
Brassica carinata BcaC05g27903 ChrC05 - View
Brassica napus C05p39110 C05 - View
Brassica napus A09p33940 A09 - View
Brassica oleracea BolC8t47997H C8 - View
Brassica oleracea BolC5t32647H C5 - View
Corylus avellana Haze_08143 Similar to RCD1: Inactive poly polymerase RCD1 (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc08_g03250 Putative Inactive poly [ADP-ribose] polymerase RCD1 chr8 + View
Citrus clementina Ciclev10001062m.g scaffold_5 + View
Carpinus fangiana Cfa012518 Cfa05 + View
Cardamine hirsuta CARHR031600 Poly polymerase catalytic domain containing protein, expressed Chr1 + View
Cardamine hirsuta CARHR129660 Inactive poly polymerase RCD1 Chr4 - View
Carya illinoinensis CiPaw.12G067900 PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED Chr12 - View
Carya illinoinensis CiPaw.11G098300 PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED Chr11 - View
Citrullus lanatus ClCG09G011650 Radical-induced cell death 1 CG_Chr09 + View
Cucumis melo MELO3C013824.2 inactive poly polymerase RCD1-like inactive poly [ADP-ribose] polymerase RCD1-like chr06 + View
Cucumis melo MELO3C003437.2 inactive poly polymerase RCD1 inactive poly [ADP-ribose] polymerase RCD1 chr04 - View
Capsella rubella Carub.0004s1720 PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED scaffold_4 - View
Capsella rubella Carub.0001s3056 PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED scaffold_1 + View
Cucumis sativus L. CsaV3_3G048860 Poly [ADP-ribose] polymerase chr3 + View
Cucumis sativus L. CsaV3_3G001370 Poly [ADP-ribose] polymerase chr3 + View
Daucus carota DCAR_004272 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_008225 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv25256 GWHABJS00000017 - View
Davidia involucrata Dinv29000 GWHABJS00000003 - View
Durio zibethinus Duzib068G1124 NW_019167838.1 + View
Durio zibethinus Duzib205G1904 NW_019168381.1 + View
Eutrema salsugineum Thhalv10016444m.g PTHR32263:SF4 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED scaffold_10 - View
Eutrema salsugineum Thhalv10007192m.g PTHR32263:SF4 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED scaffold_5 - View
Fragaria x ananassa FAN13G2070 PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED Fvb5-2 - View
Fragaria x ananassa FAN18G4384 PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED Fvb5-1 - View
Fragaria x ananassa FAN18G1679 PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED Fvb5-1 + View
Fragaria x ananassa FAN04G2983 PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED Fvb5-4 - View
Fragaria vesca FvH4_5g23020 PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED Fvb5 - View
Gossypium hirsutum Gohir.A08G153800 PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED A08 + View
Gossypium hirsutum Gohir.D08G174700 PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED D08 + View
Gossypium hirsutum Gohir.D12G208700 PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED D12 + View
Gossypium hirsutum Gohir.A12G206300 PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED A12 + View
Glycine max Glyma.09G207200 PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED Gm09 + View
Gossypium raimondii Gorai.004G182400 Chr04 + View
Gossypium raimondii Gorai.008G224200 Chr08 + View
Helianthus annuus HanXRQChr06g0172751 Probable similar to RCD one 1 HanXRQChr06 - View
Lupinus albus Lalb_Chr16g0381101 PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED Lalb_Chr16 + View
Lotus japonicus Lj2g0020551 PTHR32263:SF4 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED chr2 - View
Lonicera japonica Lj2A231T46 GWHAAZE00000002 + View
Lonicera japonica Lj8A309G35 GWHAAZE00000008 - View
Nelumbo nucifera Nn3g19391 chr3 + View
Nelumbo nucifera Nn1g00205 chr1 - View
Nicotiana tabacum Nitab4.5_0000556g0260 Poly(ADP-ribose) polymerase, catalytic domain, RST domain of plant C-terminal Nitab4.5_0000556 - View
Olea europaea Oeu017080.1 chr6 + View
Petunia axillaris Peaxi162Scf00185g00108 Inactive poly [ADP-ribose] polymerase RCD1 Peaxi162Scf00185 - View
Petunia axillaris Peaxi162Scf00045g00222 WWE protein-protein interaction domain protein family Peaxi162Scf00045 - View
Punica granatum PGR031G1634 NC_045127.1 + View
Punica granatum PGR042G1398 NC_045130.1 + View
Pisum sativum Psat2g138080 RCD1-SRO-TAF4 (RST) plant domain chr2LG1 + View
Populus trichocarpa Potri.003G096700 PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED Chr03 + View
Phaseolus vulgaris Phvul.002G137500 PTHR32263:SF4 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED Chr02 - View
Quercus lobata QL12p001555 12 - View
Rhododendron simsii Rhsim11G0021100 chr11 - View
Rhododendron simsii Rhsim07G0131700 chr07 - View
Sechium edule Sed0013180 LG01 - View
Sechium edule Sed0020361 LG05 + View
Sechium edule Sed0016766 LG04 - View
Solanum lycopersicum Solyc08g005270.3 Poly polymerase (AHRD V3.3 *** A0A2G2W3V7_CAPBA) SL4.0ch08 - View
Solanum lycopersicum Solyc08g076420.3 Poly polymerase (AHRD V3.3 *** A0A2U1QD66_ARTAN) SL4.0ch08 - View
Schrenkiella parvula Sp1g27910 PTHR32263//PTHR32263:SF4 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE RCD1-RELATED ch1-1 + View
Solanum pennellii Sopen08g025000 Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm. | WWE protein-protein interaction domain protein family | CONTAINS InterPro DOMAIN/s: WWE domain , Poly(ADP-ribose) polymerase, catalytic domain , RST domain of plant C-terminal | BEST Arabidopsis thaliana protein match is: similar to RCD one 1 Spenn-ch08 - View
Solanum pennellii Sopen08g001290 Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm. | WWE protein-protein interaction domain protein family | CONTAINS InterPro DOMAIN/s: WWE domain , Poly(ADP-ribose) polymerase, catalytic domain , RST domain of plant C-terminal | BEST Arabidopsis thaliana protein match is: similar to RCD one 1 Spenn-ch08 - View
Solanum pennellii Sopen06g021690 Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm. | WWE protein-protein interaction domain protein family | CONTAINS InterPro DOMAIN/s: WWE domain , Poly(ADP-ribose) polymerase, catalytic domain , RST domain of plant C-terminal | BEST Arabidopsis thaliana protein match is: similar to RCD one 1 Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG401016766 Ceo protein ST4.03ch06 - View
Trochodendron aralioides TAR375G0763 group15 + View
Theobroma cacao Thecc.03G309900 WWE protein-protein interaction domain protein family Chromosome_3 - View
Tarenaya hassleriana THA.LOC104798492 inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 NW_010968045.1 - View
Tarenaya hassleriana THA.LOC104814416 inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 NW_010965451.1 + View
Tripterygium wilfordii TWI81G0168 NC_052251.1 - View
Tripterygium wilfordii TWI60G1711 NC_052246.1 + View
Vaccinium macrocarpon vmacro14198 Similar to RCD1: Inactive poly polymerase RCD1 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro00281 Similar to RCD1: Inactive poly polymerase RCD1 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G0290 CM024074.1 - View
Vitis vinifera GSVIVG01013090001 chr2 + View
Zea mays Zm00001eb025040 Zm00001e002482 Probable inactive poly [ADP-ribose] polymerase SRO1 1 - View