Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0015534 PREDICTED: tRNA pseudouridine(38/39) synthase isoform X2 [Vitis vinifera] Contig1276 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G8320 LG-6 + View
Acer truncatum Atru.chr13.1965 chr13 - View
Actinidia chinensis Actinidia17754 Lachesis_group26 - View
Arabidopsis lyrata AL1G48650 scaffold_1 + View
Avicennia marina MSTRG.22119 ScioBoG_3008_HRSCAF_3015 - View
Aquilegia oxysepala Aqoxy5G02015 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3U6NKV K01855 - tRNA pseudouridine38/39 synthase [EC:5.4.99.45] (PUS3, DEG1) arahy.Tifrunner.gnm1.Arahy.09 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A75B0U K01855 - tRNA pseudouridine38/39 synthase [EC:5.4.99.45] (PUS3, DEG1) arahy.Tifrunner.gnm1.Arahy.19 - View
Arabidopsis thaliana AT1G34150 Pseudouridine synthase family protein Pseudouridine synthase family protein%3B FUNCTIONS IN: pseudouridine synthase activity%3B INVOLVED IN: pseudouridine synthesis%2C RNA modification%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Pseudouridine synthase%2C catalytic domain (InterPro:IPR020103)%2C Pseudouridine synthase I%2C TruA%2C N-terminal (InterPro:IPR020094)%2C Pseudouridine synthase I%2C TruA%2C alpha/beta domain (InterPro:IPR020097)%2C Pseudouridine synthase I%2C TruA%2C C-terminal (InterPro:IPR020095)%2C Pseudouridine synthase I%2C TruA (InterPro:IPR001406)%3B BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G06950.1)%3B Has 7569 Blast hits to 7566 proteins in 2644 species: Archae - 155%3B Bacteria - 5313%3B Metazoa - 277%3B Fungi - 265%3B Plants - 164%3B Viruses - 0%3B Other Eukaryotes - 1395 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC08g43808 ChrC08 - View
Brassica oleracea BolC6t36321H C6 - View
Brassica rapa BraA09t38776Z A09 - View
Beta vulgaris EL10Ac1g01637 5.4.99.45 - tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 Chr1_EL10_PGA_scaffold3 + View
Cicer arietinum L. Ca_10644_v3 Ca_LG4_v3 - View
Corylus avellana Haze_17834 Protein of unknown function 7 + View
Coffea canephora Cc10_g06370 Putative tRNA pseudouridine(38/39) synthase chr10 - View
Citrus clementina Ciclev10001190m.g scaffold_5 + View
Carpinus fangiana Cfa018255 Cfa07 - View
Cardamine hirsuta CARHR033660 Pseudouridine synthase Chr1 + View
Carya illinoinensis CiPaw.15G011200 5.4.99.45 - tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 Chr15 - View
Citrullus lanatus ClCG08G007170 tRNA pseudouridine synthase CG_Chr08 - View
Cucumis melo MELO3C019957.2 tRNA pseudouridine synthase chr03 + View
Carica papaya Cpa.g.sc26.127 supercontig_26 + View
Chenopodium quinoa AUR62022311 PUS3: tRNA pseudouridine(38/39) synthase C_Quinoa_Scaffold_3163 - View
Chenopodium quinoa AUR62034929 PUS3: tRNA pseudouridine(38/39) synthase C_Quinoa_Scaffold_3617 + View
Capsella rubella Carub.0001s3222 5.4.99.45 - tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 scaffold_1 + View
Cucumis sativus L. CsaV3_6G004840 tRNA pseudouridine synthase chr6 - View
Daucus carota DCAR_013167 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv41018 GWHABJS00000002 + View
Durio zibethinus Duzib093G0465 NW_019167937.1 + View
Erigeron canadensis ECA247G4107 Conyza_canadensis_scaffold:7 + View
Eucalyptus grandis Eucgr.F02671 Chr06 - View
Erythranthe guttata Migut.N02937 scaffold_14 + View
Eutrema salsugineum Thhalv10007608m.g 5.4.99.45 - tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 scaffold_5 - View
Fragaria x ananassa FAN15G2448 K01855 - tRNA pseudouridine38/39 synthase [EC:5.4.99.45] (PUS3, DEG1) Fvb2-4 - View
Fragaria x ananassa FAN24G0542 5.4.99.45 - tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 Fvb2-2 + View
Fragaria vesca FvH4_2g12780 4.2.1.70//5.4.99.12//5.4.99.45 - Pseudouridylate synthase / Uracil hydrolyase // tRNA pseudouridine(38-40) synthase / tRNA pseudouridylate synthase I // tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 Fvb2 - View
Gossypium hirsutum Gohir.D02G067400 K01855 - tRNA pseudouridine38/39 synthase [EC:5.4.99.45] (PUS3, DEG1) D02 - View
Gossypium hirsutum Gohir.A02G061800 5.4.99.45 - tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 A02 - View
Glycine max Glyma.20G171700 4.2.1.70//5.4.99.12//5.4.99.45 - Pseudouridylate synthase / Uracil hydrolyase // tRNA pseudouridine(38-40) synthase / tRNA pseudouridylate synthase I // tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 Gm20 + View
Glycine max Glyma.10G220000 4.2.1.70//5.4.99.12//5.4.99.45 - Pseudouridylate synthase / Uracil hydrolyase // tRNA pseudouridine(38-40) synthase / tRNA pseudouridylate synthase I // tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 Gm10 - View
Gossypium raimondii Gorai.005G076300 Chr05 - View
Hydrangea macrophylla Hma1.2p1_0358F.1_g134900 Hma1.2p1_0358F.1 + View
Lupinus albus Lalb_Chr02g0141641 4.2.1.70//5.4.99.12//5.4.99.45 - Pseudouridylate synthase / Uracil hydrolyase // tRNA pseudouridine(38-40) synthase / tRNA pseudouridylate synthase I // tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 Lalb_Chr02 + View
Lotus japonicus Lj5g0012902 5.4.99.45 - tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 chr5 + View
Lonicera japonica Lj7C387T6 GWHAAZE00000007 + View
Malus domestica MD05G1036800 Pseudouridine synthase family protein Chr05 + View
Manihot esculenta Manes.02G186000 Chromosome02 + View
Medicago truncatula Medtr1g097390 tRNA pseudouridine synthase A chr1 - View
Nelumbo nucifera Nn5g28881 chr5 + View
Punica granatum PGR042G2919 NC_045130.1 - View
Prunus persica Prupe.8G045000 5.4.99.45 - tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 Pp08 + View
Papaver somniferum PSO170G2558 NC_039360.1 - View
Phaseolus vulgaris Phvul.007G085300 5.4.99.45 - tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 Chr07 + View
Quercus lobata QL02p036335 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr6g0273621 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim06G0093900 chr06 + View
Salix brachista Sabra02G0049900 GWHAAZH00000002 - View
Sechium edule Sed0016594 LG03 + View
Solanum lycopersicum Solyc04g072140.4 tRNA pseudouridine synthase (AHRD V3.3 *** A0A2G3CNB1_CAPCH) SL4.0ch04 + View
Schrenkiella parvula Sp1g29390 5.4.99.45 - tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 ch1-1 + View
Solanum pennellii Sopen04g028310 Pseudouridine synthase family protein | FUNCTIONS IN: pseudouridine synthase activity | INVOLVED IN: pseudouridine synthesis, RNA modification | LOCATED IN: cellular_component unknown | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain , Pseudouridine synthase I, TruA, N-terminal , Pseudouridine synthase I, TruA, alpha/beta domain , Pseudouridine synthase I, TruA, C-terminal , Pseudouridine synthase I, TruA | BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400031154 Pseudouridine synthase ST4.03ch04 + View
Selenicereus undatus Hund26667 Scaffold_2055 - View
Trochodendron aralioides TAR625G0054 group4 + View
Theobroma cacao Thecc.08G196200 Uncharacterized protein Chromosome_8 + View
Tarenaya hassleriana THA.LOC104816107 tRNA pseudouridine(38/39) synthase isoform X1 NW_010960187.1 + View
Vaccinium macrocarpon vmacro21200 Similar to PUS3: tRNA pseudouridine(38/39) synthase (Bos taurus OX%3D9913) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G1747 CM024071.1 - View
Vitis vinifera GSVIVG01013676001 chr18_random - View