Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G1370 LG-3 + View
Acer truncatum Atru.chr12.195 chr12 + View
Actinidia chinensis Actinidia31635 Lachesis_group22 + View
Actinidia chinensis Actinidia13639 Lachesis_group3 - View
Arabidopsis lyrata AL4G38660 scaffold_4 - View
Amaranthus hybridus Ah.12g064450 E3 ubiquitin-protein ligase SHPRH (EC 2.3.2.27) (EC 3.6.4.-) (RING-type E3 ubiquitin transferase SHPRH) (SNF2, histone-linker, PHD and RING finger domain-containing helicase) AmaHy_arrow1_Scaffold_12 - View
Aquilegia oxysepala Aqoxy4G03277 CHR04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LX8ZS6 K15710 - E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19] (SHPRH) arahy.Tifrunner.gnm1.Arahy.17 + View
Arabidopsis thaliana AT2G40770 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein zinc ion binding%3BDNA binding%3Bhelicases%3BATP binding%3Bnucleic acid binding%3B FUNCTIONS IN: helicase activity%2C DNA binding%2C zinc ion binding%2C nucleic acid binding%2C ATP binding%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C PHD-type%2C conserved site (InterPro:IPR019786)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C SNF2-related (InterPro:IPR000330)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%3B BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G61140.1)%3B Has 20880 Blast hits to 12947 proteins in 1504 species: Archae - 88%3B Bacteria - 5732%3B Metazoa - 4955%3B Fungi - 5171%3B Plants - 2134%3B Viruses - 115%3B Other Eukaryotes - 2685 (source: NCBI BLink). Chr2 - View
Amborella trichopoda ATR1127G041 AmTr_v1.0_scaffold00077 - View
Brassica napus A04p31150 A04 - View
Brassica napus C04p68550 C04 - View
Brassica oleracea BolC4t28354H C4 - View
Brassica rapa BraA04t18570Z A04 - View
Beta vulgaris EL10Ac2g02668 K15710 - E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19] (SHPRH) Chr2_EL10_PGA_scaffold6 - View
Capsicum annuum CAN.G1229.10 PGAv.1.6.scaffold1229 + View
Cannabis sativa CANSAT56G0526 NC_044371.1 - View
Corylus avellana Haze_17369 Similar to RAD5A: DNA repair protein RAD5A (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc02_g05220 Putative E3 ubiquitin-protein ligase SHPRH chr2 + View
Citrus clementina Ciclev10030489m.g scaffold_4 - View
Carpinus fangiana Cfa001196 Cfa01 + View
Cardamine hirsuta CARHR135870 SNF2 helicase Chr4 - View
Carya illinoinensis CiPaw.01G307300 K15710 - E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19] (SHPRH) Chr01 - View
Citrullus lanatus ClCG11G005620 Chromodomain-helicase-DNA-binding protein 1-like CG_Chr11 + View
Cucumis melo MELO3C020016.2 E3 ubiquitin-protein ligase SHPRH isoform X1 chr03 + View
Carica papaya Cpa.g.sc19.41 supercontig_19 + View
Chenopodium quinoa AUR62030592 Shprh: E3 ubiquitin-protein ligase SHPRH C_Quinoa_Scaffold_3631 + View
Chenopodium quinoa AUR62024946 SHPRH: E3 ubiquitin-protein ligase SHPRH C_Quinoa_Scaffold_1516 - View
Capsella rubella Carub.0004s2307 K15710 - E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19] (SHPRH) scaffold_4 - View
Cucumis sativus L. CsaV3_6G002390 E3 ubiquitin-protein ligase shprh chr6 - View
Daucus carota DCAR_014660 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv21857 GWHABJS00000004 + View
Durio zibethinus Duzib106G0698 NW_019168492.1 + View
Erigeron canadensis ECA238G2994 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.J00103 Chr10 + View
Erythranthe guttata Migut.F00567 scaffold_6 + View
Eutrema salsugineum Thhalv10016132m.g K15710 - E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19] (SHPRH) scaffold_10 - View
Fragaria x ananassa FAN03G3286 PTHR10799//PTHR10799:SF695 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // RING-FINGER, DEAD-LIKE HELICASE, PHD AND SNF2 DOMAIN-CONTAINING PROTEIN Fvb7-3 + View
Fragaria x ananassa FAN06G3663 K15710 - E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19] (SHPRH) Fvb7-2 - View
Fragaria x ananassa FAN10G2846 PTHR10799//PTHR10799:SF695 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // RING-FINGER, DEAD-LIKE HELICASE, PHD AND SNF2 DOMAIN-CONTAINING PROTEIN Fvb7-1 - View
Fragaria vesca FvH4_7g26110 K15710 - E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19] (SHPRH) Fvb7 - View
Gossypium hirsutum Gohir.A10G177700 K15710 - E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19] (SHPRH) A10 + View
Gossypium hirsutum Gohir.D10G184300 K15710 - E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19] (SHPRH) D10 + View
Gossypium raimondii Gorai.011G206500 Chr11 + View
Helianthus annuus HanXRQChr14g0460551 Probable zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding HanXRQChr14 + View
Hydrangea macrophylla Hma1.2p1_0264F.1_g105950 Hma1.2p1_0264F.1 + View
Lotus japonicus LjContig00408g0027695 1.14.19.3 - Acyl-CoA 6-desaturase / Long-chain fatty acid Delta(6)-desaturase Contig00408 + View
Lonicera japonica Lj8C53G7 GWHAAZE00000008 + View
Lactuca sativa Lsat_1_v5_gn_2_126780 K15710 - E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19] (SHPRH) Lsat_1_v8_lg_2 - View
Magnolia biondii MBI15_g39394_MAGBIO AED:0.12 Chr15 - View
Malus domestica MD07G1235200 zinc ion binding Chr07 - View
Malus domestica MD01G1169300 zinc ion binding Chr01 - View
Manihot esculenta Manes.10G003100 Chromosome10 + View
Medicago truncatula Medtr5g067980 SNF2 domain protein/helicase domain protein chr5 - View
Nelumbo nucifera Nn2g10269 chr2 + View
Nicotiana tabacum Nitab4.5_0000171g0230 P-loop containing nucleoside triphosphate hydrolase, Helicase, C-terminal Nitab4.5_0000171 - View
Olea europaea Oeu064000.1 scaffold959 - View
Petunia axillaris Peaxi162Scf00073g02333 Zinc ion binding,DNA binding,helicases,ATP binding,nucleic acid binding isoform 1 Peaxi162Scf00073 + View
Punica granatum PGR044G2398 NC_045134.1 - View
Prunus persica Prupe.2G265500 Pp02 - View
Papaver somniferum PSO170G4230 NC_039360.1 - View
Papaver somniferum PSO017G2233 NC_039362.1 + View
Populus trichocarpa Potri.019G060000 K15710 - E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19] (SHPRH) Chr19 - View
Phaseolus vulgaris Phvul.008G186300 Chr08 - View
Quercus lobata QL08p065069 8 - View
Rosa chinensis RcHm_v2.0_Chr1g0372551 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim03G0153500 chr03 - View
Salvia bowleyana SalBow3G2275 GWHASIU00000006 + View
Salix brachista Sabra19G0074700 GWHAAZH00000019 - View
Simmondsia chinensis Sc11g0006050 GWHAASQ00000011 - View
Sechium edule Sed0014960 LG03 + View
Solanum lycopersicum Solyc03g095680.2 SNF2-related (AHRD V3.3 *** A0A200R3L2_9MAGN) SL4.0ch03 + View
Schrenkiella parvula Sp4g23090 K15710 - E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19] (SHPRH) ch4-6 - View
Solanum pennellii Sopen03g025600 zinc ion binding, DNA binding, helicases, ATP binding, nucleic acid binding | FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, PHD-type, conserved site , Zinc finger, PHD-type , SNF2-related , DEAD-like helicase, N-terminal , Zinc finger, FYVE/PHD-type , DNA/RNA helicase, C-terminal , Tetratricopeptide repeat-containing | BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related Spenn-ch03 + View
Selenicereus undatus Hund13438 Scaffold_33679 + View
Trochodendron aralioides TAR623G0849 group7 + View
Theobroma cacao Thecc.10G184900 Zinc ion binding Chromosome_10 - View
Tarenaya hassleriana THA.LOC104824249 E3 ubiquitin-protein ligase SHPRH NW_010960187.1 - View
Tripterygium wilfordii TWI09G0099 NC_052245.1 + View
Vaccinium macrocarpon vmacro06901 Similar to SHPRH: E3 ubiquitin-protein ligase SHPRH (Homo sapiens OX%3D9606) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01032657001 chr13 - View