Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG6G13970 | LG-6 | - | View | |
Acer truncatum | Atru.chr3.332 | chr3 | + | View | |
Actinidia chinensis | Actinidia16491 | Lachesis_group25 | - | View | |
Arabidopsis lyrata | AL7G13770 | scaffold_7 | + | View | |
Avicennia marina | MSTRG.23749 | ScioBoG_3895_HRSCAF_3912 | + | View | |
Arabidopsis thaliana | AT4G37000 | accelerated cell death 2 (ACD2) Mutants have spontaneous spreading cell death lesions and constitutive activation of defenses in the absence of pathogen infection. Its product was shown to display red chlorophyll catabolite reductase (RCCR)%2C which catalyzes one step in the breakdown of the porphyrin component of chlorophyll. The enzyme was further assessed to be a Type-1 (pFCC-1-producing) RCCR.Upon P. syringae infection%2C ACD2 localization shifts from being largely in chloroplasts to partitioning to chloroplasts%2C mitochondria%2C and to a small extent%2C cytosol. Overexpression of ACD2 delayed cell death and the replication of P. syringae. ACCELERATED CELL DEATH 2 (ACD2)%3B FUNCTIONS IN: red chlorophyll catabolite reductase activity%3B INVOLVED IN: chlorophyll catabolic process%2C defense response%2C incompatible interaction%2C regulation of programmed cell death%2C regulation of plant-type hypersensitive response%3B LOCATED IN: in 6 components%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Red chlorophyll catabolite reductase (InterPro:IPR009439)%3B Has 181 Blast hits to 181 proteins in 30 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 0%3B Fungi - 0%3B Plants - 170%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink). | Chr4 | + | View |
Brassica carinata | BcaNung02518 | Contig886 | - | View | |
Brassica napus | A01p01870 | A01 | + | View | |
Brassica napus | C01p02010 | C01 | + | View | |
Brassica oleracea | BolC1t00195H | C1 | + | View | |
Brassica rapa | BraA01t00176Z | A01 | + | View | |
Beta vulgaris | EL10Ac6g15748 | 1.3.1.80 - Red chlorophyll catabolite reductase / Red Chl catabolite reductase | Chr6_EL10_PGA_scaffold0 | + | View |
Cannabis sativa | CANSAT01G2652 | NC_044373.1 | - | View | |
Corylus avellana | Haze_15405 | Similar to RCCR: Red chlorophyll catabolite reductase, chloroplastic (Arabidopsis thaliana OX%3D3702) | 11 | + | View |
Citrus clementina | Ciclev10026248m.g | scaffold_7 | - | View | |
Carpinus fangiana | Cfa004018 | Cfa01 | - | View | |
Cardamine hirsuta | CARHR245500 | Red chlorophyll catabolite reductase | Chr7 | - | View |
Carya illinoinensis | CiPaw.02G008500 | 1.3.1.80 - Red chlorophyll catabolite reductase / Red Chl catabolite reductase | Chr02 | + | View |
Carya illinoinensis | CiPaw.01G018500 | 1.3.1.80 - Red chlorophyll catabolite reductase / Red Chl catabolite reductase | Chr01 | + | View |
Citrullus lanatus | ClCG02G012600 | Red chlorophyll catabolite reductase | CG_Chr02 | + | View |
Carica papaya | Cpa.g.sc55.151 | supercontig_55 | + | View | |
Chenopodium quinoa | AUR62001931 | rccR: Red chlorophyll catabolite reductase | C_Quinoa_Scaffold_4480 | + | View |
Chenopodium quinoa | AUR62003879 | RCCR: Red chlorophyll catabolite reductase, chloroplastic | C_Quinoa_Scaffold_2370 | - | View |
Capsella rubella | Carub.0007s0320 | 1.3.1.80 - Red chlorophyll catabolite reductase / Red Chl catabolite reductase | scaffold_7 | + | View |
Cucumis sativus L. | CsaV3_2G016720 | red chlorophyll catabolite reductase-like | chr2 | + | View |
Davidia involucrata | Dinv29984 | GWHABJS00000502 | - | View | |
Davidia involucrata | Dinv39853 | GWHABJS00000014 | - | View | |
Durio zibethinus | Duzib187G0496 | NW_019167860.1 | + | View | |
Durio zibethinus | Duzib147G0592 | NW_019168470.1 | + | View | |
Erigeron canadensis | ECA238G3150 | Conyza_canadensis_scaffold:6 | + | View | |
Eucalyptus grandis | Eucgr.I00930 | Chr09 | + | View | |
Erythranthe guttata | Migut.H00434 | scaffold_8 | + | View | |
Eutrema salsugineum | Thhalv10025731m.g | 1.3.1.80 - Red chlorophyll catabolite reductase / Red Chl catabolite reductase | scaffold_1 | + | View |
Gossypium hirsutum | Gohir.A11G192100 | 1.3.1.80 - Red chlorophyll catabolite reductase / Red Chl catabolite reductase | A11 | - | View |
Gossypium hirsutum | Gohir.D11G198600 | 1.3.1.80 - Red chlorophyll catabolite reductase / Red Chl catabolite reductase | D11 | - | View |
Gossypium raimondii | Gorai.007G212700 | Chr07 | - | View | |
Lonicera japonica | Lj7A69G43 | GWHAAZE00000007 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_2_84140 | 1.3.1.80 - Red chlorophyll catabolite reductase / Red Chl catabolite reductase | Lsat_1_v8_lg_2 | + | View |
Malus domestica | MD15G1283600 | accelerated cell death 2 (ACD2) | Chr15 | - | View |
Manihot esculenta | Manes.13G124600 | Chromosome13 | + | View | |
Olea europaea | Oeu004826.1 | chr15 | + | View | |
Petunia axillaris | Peaxi162Scf00685g00059 | Red chlorophyll catabolite reductase | Peaxi162Scf00685 | + | View |
Punica granatum | PGR004G2460 | NC_045131.1 | - | View | |
Prunus persica | Prupe.7G133700 | 1.3.1.80 - Red chlorophyll catabolite reductase / Red Chl catabolite reductase | Pp07 | + | View |
Populus trichocarpa | Potri.007G043500 | 1.3.1.80 - Red chlorophyll catabolite reductase / Red Chl catabolite reductase | Chr07 | - | View |
Quercus lobata | QL06p041440 | 6 | + | View | |
Rhododendron simsii | Rhsim08G0100700 | chr08 | + | View | |
Striga asiatica | SGA_v2.0_scaffold15G07296 | scaffold15 | - | View | |
Salix brachista | Sabra07G0038400 | GWHAAZH00000007 | - | View | |
Sechium edule | Sed0020584 | LG01 | - | View | |
Solanum lycopersicum | Solyc03g044470.4 | red chlorophyll catabolite reductase | SL4.0ch03 | + | View |
Schrenkiella parvula | Sp7g34760 | 1.3.1.80 - Red chlorophyll catabolite reductase / Red Chl catabolite reductase | ch7-6 | - | View |
Solanum pennellii | Sopen03g008630 | Red chlorophyll catabolite reductase, Mutants have spontaneous spreading cell death lesions and constitutive activation of defenses in the absence of pathogen infection. Its product was shown to display red chlorophyll catabolite reductase (RCCR), which catalyzes one step in the breakdown of the porphyrin component of chlorophyll. The enzyme was further assessed to be a Type-1 (pFCC-1-producing) RCCR.Upon P. syringae infection, ACD2 localization shifts from being largely in chloroplasts to partitioning to chloroplasts, mitochondria, and to a small extent, cytosol. Overexpression of ACD2 delayed cell death and the replication of P. syringae. | ACCELERATED CELL DEATH 2 (ACD2) | FUNCTIONS IN: red chlorophyll catabolite reductase activity | INVOLVED IN: chlorophyll catabolic process, defense response, incompatible interaction, regulation of programmed cell death, regulation of plant-type hypersensitive response | LOCATED IN: in 6 components | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Red chlorophyll catabolite reductase | Spenn-ch03 | + | View |
Solanum tuberosum | PGSC0003DMG400018987 | Red chlorophyll catabolite reductase | ST4.03ch03 | + | View |
Trochodendron aralioides | TAR376G0493 | group14 | + | View | |
Theobroma cacao | Thecc.01G055400 | Red chlorophyll catabolite reductase | Chromosome_1 | - | View |
Tarenaya hassleriana | THA.LOC104807582 | red chlorophyll catabolite reductase%2C chloroplastic | NW_010963495.1 | - | View |
Tripterygium wilfordii | TWI09G1278 | NC_052245.1 | - | View | |
Tripterygium wilfordii | TWI53G0428 | NC_052244.1 | - | View | |
Tripterygium wilfordii | TWI73G1146 | NC_052232.1 | + | View | |
Vaccinium macrocarpon | vmacro17952 | Similar to RCCR: Red chlorophyll catabolite reductase, chloroplastic (Arabidopsis thaliana OX%3D3702) | chr3_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vitis vinifera | GSVIVG01022135001 | chr7 | + | View |