Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0042174 PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Vitis vinifera] Chr9 + View
CSS0026881 PREDICTED: pentatricopeptide repeat-containing protein At4g14050, mitochondrial-like [Vitis vinifera] Chr3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr4.840 chr4 - View
Actinidia chinensis Actinidia10681 Lachesis_group28 + View
Actinidia chinensis Actinidia29511 Lachesis_group7 + View
Actinidia chinensis Actinidia03444 Lachesis_group27 + View
Arabidopsis lyrata AL2G37180 scaffold_2 + View
Avicennia marina MSTRG.25329 ScioBoG_4119_HRSCAF_4138 - View
Avicennia marina MSTRG.24192 ScioBoG_4088_HRSCAF_4107 - View
Aquilegia oxysepala Aqoxy6G00320 CHR06 + View
Aquilegia oxysepala Aqoxy5G02187 CHR05 + View
Arabidopsis thaliana AT1G77010 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G13600.1)%3B Has 48292 Blast hits to 13963 proteins in 224 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 112%3B Fungi - 57%3B Plants - 47549%3B Viruses - 0%3B Other Eukaryotes - 574 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G43980 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1)%3B Has 35490 Blast hits to 12305 proteins in 148 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 8%3B Fungi - 8%3B Plants - 35171%3B Viruses - 0%3B Other Eukaryotes - 303 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR1136G092 AmTr_v1.0_scaffold00071 - View
Cicer arietinum L. Ca_20018_v3 Ca_LG6_v3 + View
Carpinus fangiana Cfa002820 Cfa01 + View
Carya illinoinensis CiPaw.15G022400 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr15 + View
Carya illinoinensis CiPaw.16G017700 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr16 + View
Citrullus lanatus ClCG09G015460 Pentatricopeptide repeat-containing protein, putative CG_Chr09 + View
Chenopodium quinoa AUR62017892 PCMP-A1: Pentatricopeptide repeat-containing protein At1g31790 C_Quinoa_Scaffold_3086 + View
Chenopodium quinoa AUR62003576 PCMP-A1: Pentatricopeptide repeat-containing protein At1g31790 C_Quinoa_Scaffold_2370 + View
Daucus carota DCAR_001169 hypothetical protein DCARv2_Chr1 - View
Durio zibethinus Duzib116G0034 NW_019167949.1 + View
Durio zibethinus Duzib041G0254 NW_019167826.1 + View
Eucalyptus grandis Eucgr.F02741 Chr06 + View
Eucalyptus grandis Eucgr.F02666 Chr06 - View
Erythranthe guttata Migut.C01035 scaffold_3 - View
Erythranthe guttata Migut.N03238 scaffold_14 - View
Fragaria x ananassa FAN24G3190 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2-2 + View
Gossypium hirsutum Gohir.A01G204100 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) A01 - View
Gossypium hirsutum Gohir.D01G193600 PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) D01 - View
Gossypium raimondii Gorai.002G237700 Chr02 - View
Hydrangea macrophylla Hma1.2p1_0107F.1_g051370 Hma1.2p1_0107F.1 + View
Lonicera japonica Lj2P604T17 GWHAAZE00000002 + View
Malus domestica MD05G1012400 Pentatricopeptide repeat (PPR-like) superfamily protein Chr05 + View
Malus domestica MD07G1031100 Pentatricopeptide repeat (PPR) superfamily protein Chr07 + View
Malus domestica MD10G1015600 Pentatricopeptide repeat (PPR) superfamily protein Chr10 - View
Manihot esculenta Manes.02G174200 Chromosome02 + View
Nelumbo nucifera Nn1g06206 chr1 - View
Olea europaea Oeu049342.1 chr14 + View
Petunia axillaris Peaxi162Scf00263g00002 Pentatricopeptide repeat-containing protein Peaxi162Scf00263 + View
Prunus persica Prupe.8G017600 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Pp08 - View
Pisum sativum Psat5g080920 PPR repeat family chr5LG3 - View
Papaver somniferum PSO675G6394 NC_039358.1 + View
Populus trichocarpa Potri.002G072500 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Chr02 - View
Quercus lobata QL06p029223 6 + View
Quercus lobata QL09p028664 9 - View
Rosa chinensis RcHm_v2.0_Chr5g0009041 RcHm_v2.0_Chr5 - View
Striga asiatica SGA_v2.0_scaffold19G08635 scaffold19 - View
Salvia bowleyana SalBow6G5284 GWHASIU00000002 - View
Salix brachista Sabra02G0057100 GWHAAZH00000002 - View
Solanum lycopersicum Solyc11g005960.1 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8EYH8_CAPAN) SL4.0ch11 - View
Solanum lycopersicum Solyc04g064650.1 pentatricopeptide repeat-containing protein At3g29230-like (AHRD V3.3 *** A0A2I4HTW6_9ROSI) SL4.0ch04 - View
Schrenkiella parvula Sp5g32150 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch5-7 + View
Solanum pennellii Sopen04g026610 Encodes a chloroplast RNA editing factor. | ORGANELLE TRANSCRIPT PROCESSING 81 (OTP81) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400024816 Selenium-binding protein ST4.03ch04 - View
Trochodendron aralioides TAR381G1064 group11 - View
Theobroma cacao Thecc.08G143000 Chromosome_8 - View
Vitis vinifera GSVIVG01026513001 chr4 - View