Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0027055 PREDICTED: probable RNA helicase SDE3 [Vitis vinifera] Chr9 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G19180 LG-1 + View
Acer truncatum Atru.chr4.2430 chr4 + View
Arabidopsis lyrata AL1G15300 scaffold_1 - View
Amaranthus hybridus Ah.07g204230 Probable RNA helicase SDE3 (EC 3.6.4.13) (Silencing defective protein 3) AmaHy_arrow1_Scaffold_7 + View
Aquilegia oxysepala Aqoxy5G00438 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IF8NHZ K18422 - helicase MOV-10 [EC:3.6.4.13] (MOV10) arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SX262Z K18422 - helicase MOV-10 [EC:3.6.4.13] (MOV10) arahy.Tifrunner.gnm1.Arahy.15 - View
Arabidopsis thaliana AT1G05460 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a protein with similarity to RNA helicases. Mutants are defective in post-transcriptional gene silencing. SILENCING DEFECTIVE (SDE3)%3B FUNCTIONS IN: RNA helicase activity%3B INVOLVED IN: virus induced gene silencing%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Restriction endonuclease%2C type I%2C R subunit/Type III%2C Res subunit (InterPro:IPR006935)%2C DNA helicase%2C UvrD/REP type (InterPro:IPR000212)%3B BEST Arabidopsis thaliana protein match is: RNA helicase%2C putative (TAIR:AT5G47010.1)%3B Has 8827 Blast hits to 7137 proteins in 1206 species: Archae - 219%3B Bacteria - 2402%3B Metazoa - 1784%3B Fungi - 1431%3B Plants - 666%3B Viruses - 219%3B Other Eukaryotes - 2106 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR0665G272 AmTr_v1.0_scaffold00002 + View
Brassica carinata BcaB02g06857 ChrB02 + View
Brassica carinata BcaC05g24383 ChrC05 + View
Brassica napus C05p03810 C05 - View
Brassica napus A10p04180 A10 - View
Brassica oleracea BolC5t29158H C5 - View
Brassica rapa BraA10t42687Z A10 - View
Capsicum annuum CAN.G231.13 PGAv.1.6.scaffold231 - View
Cannabis sativa CANSAT78G2191 NC_044376.1 - View
Cicer arietinum L. Ca_24420_v3 Ca_LG8_v3 + View
Corylus avellana Haze_11201 Similar to SDE3: Probable RNA helicase SDE3 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc03_g04040 Probable RNA helicase SDE3 chr3 - View
Citrus clementina Ciclev10004283m.g scaffold_9 - View
Citrus clementina Ciclev10000353m.g scaffold_5 - View
Ceratophyllum demersum CDE07G0808 5 - View
Ceratophyllum demersum CDE06G1398 4 + View
Carpinus fangiana Cfa008472 Cfa03 + View
Cardamine hirsuta CARHR004950 P-loop containing nucleoside triphosphate hydrolases superfamily protein Chr1 - View
Carya illinoinensis CiPaw.01G198300 K18422 - helicase MOV-10 [EC:3.6.4.13] (MOV10) Chr01 + View
Citrullus lanatus ClCG06G006340 P-loop containing nucleoside triphosphate hydrolases superfamily protein LENGTH=1002 CG_Chr06 - View
Cucumis melo MELO3C012664.2 Regulator of nonsense transcripts 1 chr01 - View
Capsella rubella Carub.0001s0479 scaffold_1 - View
Cucumis sativus L. CsaV3_7G022380 Mov10 RISC complex RNA helicase chr7 + View
Daucus carota DCAR_002375 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv14015 GWHABJS00000016 + View
Durio zibethinus Duzib151G1175 NW_019167904.1 - View
Eucalyptus grandis Eucgr.H03436 Chr08 + View
Erythranthe guttata Migut.G00361 scaffold_7 - View
Eutrema salsugineum Thhalv10006684m.g K18422 - helicase MOV-10 [EC:3.6.4.13] (MOV10) scaffold_5 + View
Fragaria x ananassa FAN22G0261 KOG1803 - DNA helicase Fvb4-1 + View
Fragaria x ananassa FAN17G1329 K18422 - helicase MOV-10 [EC:3.6.4.13] (MOV10) Fvb4-2 - View
Gossypium hirsutum Gohir.A09G217400 K18422 - helicase MOV-10 [EC:3.6.4.13] (MOV10) A09 - View
Gossypium hirsutum Gohir.D09G219800 K18422 - helicase MOV-10 [EC:3.6.4.13] (MOV10) D09 - View
Glycine max Glyma.01G235200 K18422 - helicase MOV-10 [EC:3.6.4.13] (MOV10) Gm01 - View
Gossypium raimondii Gorai.006G240800 Chr06 - View
Lupinus albus Lalb_Chr16g0376481 K18422 - helicase MOV-10 [EC:3.6.4.13] (MOV10) Lalb_Chr16 + View
Lonicera japonica Lj3E732T0 GWHAAZE00000003 + View
Malus domestica MD13G1196500 P-loop containing nucleoside triphosphate hydrolases superfamily protein Chr13 - View
Manihot esculenta Manes.03G175900 Chromosome03 + View
Medicago truncatula Medtr5g006890 RNA helicase SDE3-like protein chr5 + View
Nelumbo nucifera Nn1g02374 chr1 - View
Nicotiana tabacum Nitab4.5_0000321g0190 P-loop containing nucleoside triphosphate hydrolase, Probable RNA helicase SDE3 Nitab4.5_0000321 - View
Oryza sativa ssp. japonica Os03g0160400 Similar to ACL098Cp. chr03 - View
Punica granatum PGR004G1808 NC_045131.1 - View
Prunus persica Prupe.1G017300 Pp01 - View
Pisum sativum Psat2g190040 AAA domain chr2LG1 - View
Papaver somniferum PSO210G3945 NC_039359.1 + View
Papaver somniferum PSO832G1692 NC_039367.1 - View
Populus trichocarpa Potri.008G155400 PTHR10887//PTHR10887:SF362 - DNA2/NAM7 HELICASE FAMILY // RNA HELICASE SDE3-RELATED Chr08 - View
Phaseolus vulgaris Phvul.002G042600 K18422 - helicase MOV-10 [EC:3.6.4.13] (MOV10) Chr02 - View
Quercus lobata QL06p001686 6 + View
Rosa chinensis RcHm_v2.0_Chr4g0415581 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim04G0200000 chr04 + View
Striga asiatica SGA_v2.0_scaffold191G40493 scaffold191 + View
Salvia bowleyana SalBow2G0283 GWHASIU00000007 + View
Simmondsia chinensis Sc13g0004580 GWHAASQ00000013 - View
Sechium edule Sed0023639 LG04 - View
Solanum lycopersicum Solyc06g054020.3 p-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A1P8AMM9_ARATH) SL4.0ch06 + View
Schrenkiella parvula Sp1g04340 K18422 - helicase MOV-10 [EC:3.6.4.13] (MOV10) ch1-1 - View
Solanum tuberosum PGSC0003DMG400016310 ATP-dependent helicase NAM7 ST4.03ch06 + View
Trochodendron aralioides TAR636G1187 group1 + View
Theobroma cacao Thecc.04G235200 P-loop containing nucleoside triphosphate hydrolases superfamily protein Chromosome_4 - View
Tarenaya hassleriana THA.LOC104800956 probable RNA helicase SDE3 NW_010969548.1 + View
Trifolium pratense TPR.G37897 Tp57577_TGAC_v2_LG2 - View
Tripterygium wilfordii TWI53G0907 NC_052244.1 - View
Vigna mungo VMungo1215G2311 CM024074.1 + View
Vitis vinifera GSVIVG01018011001 chr5 - View
Zea mays Zm00001eb403310 Zm00001e039008 Putative RNA helicase family protein Probable RNA helicase SDE3 9 - View