Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0010098 PREDICTED: pentatricopeptide repeat-containing protein At2g20540 [Nicotiana sylvestris] Chr12 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr7.2301 chr7 - View
Actinidia chinensis Actinidia15720 Lachesis_group27 - View
Actinidia chinensis Actinidia13416 Lachesis_group12 + View
Arabidopsis thaliana AT3G15930 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1)%3B Has 42861 Blast hits to 14596 proteins in 286 species: Archae - 0%3B Bacteria - 14%3B Metazoa - 129%3B Fungi - 192%3B Plants - 41743%3B Viruses - 0%3B Other Eukaryotes - 783 (source: NCBI BLink). Chr3 + View
Beta vulgaris EL10Ac2g04011 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr2_EL10_PGA_scaffold6 - View
Beta vulgaris EL10Ac2g02524 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr2_EL10_PGA_scaffold6 - View
Capsicum annuum CAN.G309.70 PGAv.1.6.scaffold309 + View
Cicer arietinum L. Ca_15629_v3 Ca_LG5_v3 + View
Corylus avellana Haze_21820 Similar to PCMP-E78: Pentatricopeptide repeat-containing protein At2g20540 (Arabidopsis thaliana OX%3D3702) 3 - View
Corylus avellana Haze_21648 Similar to PCMP-H56: Pentatricopeptide repeat-containing protein At3g22690 (Arabidopsis thaliana OX%3D3702) 3 + View
Coffea canephora Cc08_g08570 Putative pentatricopeptide repeat-containing protein At3g15130 chr8 - View
Citrus clementina Ciclev10008063m.g scaffold_1 + View
Ceratophyllum demersum CDE05G3021 3 - View
Carpinus fangiana Cfa013225 Cfa05 + View
Carpinus fangiana Cfa013329 Cfa05 - View
Cardamine hirsuta CARHR115760 Pentatricopeptide repeat-containing protein Chr4 - View
Carya illinoinensis CiPaw.08G022200 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr08 - View
Carya illinoinensis CiPaw.08G016700 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr08 + View
Citrullus lanatus ClCG09G002080 Pentatricopeptide repeat-containing protein CG_Chr09 - View
Cucumis melo MELO3C029259.2 pentatricopeptide repeat-containing protein At4g21065-like chr01 + View
Chenopodium quinoa AUR62024820 PCMP-H86: Putative pentatricopeptide repeat-containing protein At3g15130 C_Quinoa_Scaffold_1516 + View
Chenopodium quinoa AUR62022093 PCMP-E37: Putative pentatricopeptide repeat-containing protein At5g37570 C_Quinoa_Scaffold_4319 - View
Capsella rubella Carub.0003s1567 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_3 + View
Cucumis sativus L. CsaV3_7G033240 pentatricopeptide repeat-containing protein At4g21065-like chr7 + View
Daucus carota DCAR_003094 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv14211 GWHABJS00000017 - View
Davidia involucrata Dinv30239 GWHABJS00000003 + View
Durio zibethinus Duzib150G1045 NW_019167882.1 + View
Durio zibethinus Duzib187G0400 NW_019167860.1 - View
Eucalyptus grandis Eucgr.C02875 Chr03 + View
Erythranthe guttata Migut.A00252 scaffold_1 - View
Eutrema salsugineum Thhalv10022302m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_13 - View
Fragaria x ananassa FAN15G1489 PF14432 - DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2-4 - View
Fragaria vesca FvH4_2g36310 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2 - View
Gossypium hirsutum Gohir.A07G024300 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A07 - View
Gossypium hirsutum Gohir.D07G027900 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D07 - View
Glycine max Glyma.06G080400 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm06 - View
Glycine max Glyma.04G078800 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm04 + View
Gossypium raimondii Gorai.001G029200 Chr01 - View
Lupinus albus Lalb_Chr14g0362251 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lalb_Chr14 - View
Lonicera japonica Lj7P709T55 GWHAAZE00000007 - View
Magnolia biondii MBI01_g10020_MAGBIO AED:0.58 Chr01 - View
Malus domestica MD08G1120300 Tetratricopeptide repeat (TPR)-like superfamily protein Chr08 - View
Malus domestica MD15G1113800 Tetratricopeptide repeat (TPR)-like superfamily protein Chr15 - View
Manihot esculenta Manes.16G069000 Chromosome16 + View
Punica granatum PGR042G1628 NC_045130.1 - View
Punica granatum PGR044G1655 NC_045134.1 - View
Punica granatum PGR031G3445 NC_045127.1 - View
Prunus persica Prupe.1G454500 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp01 - View
Prunus persica Prupe.1G464900 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp01 - View
Pisum sativum Psat5g028440 Pentatricopeptide repeat chr5LG3 - View
Pisum sativum Psat6g036680 PPR repeat family chr6LG2 - View
Populus trichocarpa Potri.018G035900 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr18 - View
Populus trichocarpa Potri.006G244500 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr06 - View
Phaseolus vulgaris Phvul.009G104600 PF13041 - PPR repeat family (PPR_2) Chr09 - View
Rhododendron simsii Rhsim07G0155100 chr07 - View
Salvia bowleyana SalBow4G2445 GWHASIU00000008 + View
Salix brachista Sabra06G0191400 GWHAAZH00000006 - View
Salix brachista Sabra18G0036400 GWHAAZH00000018 - View
Simmondsia chinensis Sc09g0008950 GWHAASQ00000009 - View
Solanum lycopersicum Solyc11g071370.1 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QJM0_9MAGN) SL4.0ch11 + View
Schrenkiella parvula Sp3g14250 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch3-1 + View
Solanum tuberosum PGSC0003DMG400018569 Tetratricopeptide-like helical ST4.03ch11 + View
Theobroma cacao Thecc.09G038000 Tetratricopeptide repeat (TPR)-like superfamily protein Chromosome_9 + View
Tarenaya hassleriana THA.LOC104815050 pentatricopeptide repeat-containing protein At2g20540 NW_010965541.1 + View
Tripterygium wilfordii TWI34G1694 NC_052235.1 + View
Vigna mungo VMungo1309G2615 CM024072.1 - View
Vitis vinifera GSVIVG01035759001 chr4 - View