Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G17330 LG-4 + View
Acer truncatum Atru.chr6.2634 chr6 + View
Actinidia chinensis Actinidia18320 Lachesis_group13 + View
Arabidopsis lyrata AL5G28290 scaffold_5 + View
Avicennia marina MSTRG.22883 ScioBoG_3703_HRSCAF_3719 - View
Avicennia marina MSTRG.9347 ScioBoG_12795_HRSCAF_12848 + View
Amaranthus hybridus Ah.11g046580 Long chain base biosynthesis protein 2a (AtLCB2a) (EC 2.3.1.50) (Long chain base biosynthesis protein 2) (AtLCB2) AmaHy_arrow1_Scaffold_11 + View
Amaranthus hybridus Ah.02g114690 AmaHy_arrow1_Scaffold_2 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0KJ6B5 PTHR13693//PTHR13693:SF62 - CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.06 - View
Arabidopsis thaliana AT3G48780 serine palmitoyltransferase 1 Encodes one of the two LCB2 subunits (LCB2a and LCB2b) of serine palmitoyltransferase%2C an enzyme involved in sphingolipid biosynthesis. LCB2a and LCB2b are functional redundant. Double mutants are gametophytic lethal. serine palmitoyltransferase 1 (SPT1)%3B FUNCTIONS IN: serine C-palmitoyltransferase activity%3B INVOLVED IN: photomorphogenesis%2C sphingolipid biosynthetic process%2C pollen development%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase%2C major domain (InterPro:IPR015424)%2C Aminotransferase%2C class I/classII (InterPro:IPR004839)%2C Aminotransferase%2C class-II%2C pyridoxal-phosphate binding site (InterPro:IPR001917)%2C Pyridoxal phosphate-dependent transferase%2C major region%2C subdomain 1 (InterPro:IPR015421)%3B BEST Arabidopsis thaliana protein match is: long chain base2 (TAIR:AT5G23670.2)%3B Has 10415 Blast hits to 10387 proteins in 2165 species: Archae - 77%3B Bacteria - 7001%3B Metazoa - 736%3B Fungi - 585%3B Plants - 234%3B Viruses - 9%3B Other Eukaryotes - 1773 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC09g49902 ChrC09 + View
Brassica napus A06p27910 A06 + View
Brassica napus A01p25220 A01 - View
Brassica oleracea BolC1t03083H C1 - View
Brassica rapa BraA01t02432Z A01 - View
Brassica rapa BraA06t25732Z A06 + View
Beta vulgaris EL10Ac5g11331 PTHR13693//PTHR13693:SF62 - CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE // SUBFAMILY NOT NAMED Chr5_EL10_PGA_scaffold2 - View
Corylus avellana Haze_07121 Similar to LCB2a: Long chain base biosynthesis protein 2a (Arabidopsis thaliana OX%3D3702) 4 - View
Corylus avellana Haze_14931 Similar to Os11g0516000: Long chain base biosynthesis protein 2a (Oryza sativa subsp. japonica OX%3D39947) 5 + View
Coffea canephora Cc04_g09460 Serine palmitoyltransferase 2 chr4 - View
Citrus clementina Ciclev10017847m.g scaffold_2 - View
Ceratophyllum demersum CDE02G2903 1 + View
Carpinus fangiana Cfa018729 Cfa08 - View
Carpinus fangiana Cfa007178 Cfa03 - View
Cardamine hirsuta CARHR157550 serine palmitoyltransferase 1 Chr5 + View
Carya illinoinensis CiPaw.11G002100 2.3.1.50 - Serine C-palmitoyltransferase Chr11 - View
Citrullus lanatus ClCG06G018230 8-amino-7-oxononanoate synthase CG_Chr06 + View
Cucumis melo MELO3C026175.2 Long chain base biosynthesis protein chr02 + View
Carica papaya Cpa.g.sc70.85 supercontig_70 - View
Chenopodium quinoa AUR62034784 LCB2a: Long chain base biosynthesis protein 2a C_Quinoa_Scaffold_3586 - View
Chenopodium quinoa AUR62029525 LCB2a: Long chain base biosynthesis protein 2a C_Quinoa_Scaffold_2306 - View
Capsella rubella Carub.0005s1495 2.3.1.50 - Serine C-palmitoyltransferase scaffold_5 + View
Cucumis sativus L. CsaV3_1G000200 Serine palmitoyltransferase long chain base subunit chr1 - View
Daucus carota DCAR_026256 hypothetical protein DCARv2_Chr7 + View
Daucus carota DCAR_021415 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv11216 GWHABJS00000006 + View
Davidia involucrata Dinv23199 GWHABJS00000019 + View
Durio zibethinus Duzib264G0999 NW_019167960.1 - View
Durio zibethinus Duzib084G0449 NW_019167827.1 + View
Durio zibethinus Duzib068G1399 NW_019167838.1 + View
Erigeron canadensis ECA246G0036 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.K02201 Chr11 - View
Erythranthe guttata Migut.D01228 scaffold_4 - View
Eutrema salsugineum Thhalv10004251m.g K00654 - serine palmitoyltransferase (SPT) scaffold_6 + View
Eutrema salsugineum Thhalv10010322m.g K00654 - serine palmitoyltransferase (SPT) scaffold_16 - View
Fragaria x ananassa FAN14G1125 K00654 - serine palmitoyltransferase (SPT) Fvb6-1 - View
Gossypium hirsutum Gohir.D12G194900 PTHR13693//PTHR13693:SF62 - CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE // SUBFAMILY NOT NAMED D12 + View
Gossypium hirsutum Gohir.A12G192800 PTHR13693//PTHR13693:SF62 - CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE // SUBFAMILY NOT NAMED A12 + View
Glycine max Glyma.16G146500 PTHR13693//PTHR13693:SF62 - CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE // SUBFAMILY NOT NAMED Gm16 + View
Gossypium raimondii Gorai.008G209600 Chr08 + View
Helianthus annuus HanXRQChr09g0273591 Probable long chain base2 HanXRQChr09 - View
Lupinus albus Lalb_Chr22g0360011 K00654 - serine palmitoyltransferase (SPT) Lalb_Chr22 - View
Lonicera japonica Lj9C484T8 GWHAAZE00000009 + View
Lonicera japonica Lj5C91G2 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_5_10500 PTHR13693//PTHR13693:SF62 - CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE // SUBFAMILY NOT NAMED Lsat_1_v8_lg_5 - View
Malus domestica MD09G1004800 long chain base2 Chr09 - View
Malus domestica MD06G1133500 long chain base2 Chr06 - View
Malus domestica MD17G1008800 long chain base2 Chr17 - View
Manihot esculenta Manes.14G046600 Chromosome14 - View
Manihot esculenta Manes.06G124900 Chromosome06 + View
Nelumbo nucifera Nn3g16315 chr3 - View
Nelumbo nucifera Nn4g22188 chr4 - View
Oryza sativa ssp. japonica Os01g0928600 Serine palmitoyltransferase. chr01 - View
Oryza sativa ssp. japonica Os11g0516000 Similar to Serine palmitoyltransferase (Fragment). chr11 + View
Punica granatum PGR044G0798 NC_045134.1 + View
Prunus persica Prupe.5G144700 K00654 - serine palmitoyltransferase (SPT) Pp05 - View
Papaver somniferum PSO478G2975 NC_039361.1 - View
Papaver somniferum PSO017G2895 NC_039362.1 - View
Populus trichocarpa Potri.012G104500 PTHR13693//PTHR13693:SF62 - CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE // SUBFAMILY NOT NAMED Chr12 + View
Populus trichocarpa Potri.015G103800 PTHR13693//PTHR13693:SF62 - CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE // SUBFAMILY NOT NAMED Chr15 + View
Quercus lobata QL10p001065 10 - View
Rhododendron simsii Rhsim08G0195100 chr08 + View
Striga asiatica SGA_v2.0_scaffold74G24702 scaffold74 - View
Salix brachista Sabra12G0076900 GWHAAZH00000012 + View
Salix brachista Sabra15G0123500 GWHAAZH00000015 + View
Simmondsia chinensis Sc04g0000300 GWHAASQ00000004 - View
Sechium edule Sed0009874 LG12 + View
Schrenkiella parvula Sp5g13240 PTHR13693//PTHR13693:SF62 - CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE // SUBFAMILY NOT NAMED ch5-1 - View
Selenicereus undatus Hund10073 Scaffold_10417 + View
Selenicereus undatus Hund02483 Scaffold_33678 + View
Trochodendron aralioides TAR371G0736 group13 + View
Trochodendron aralioides TAR629G0860 group0 - View
Theobroma cacao Thecc.03G137600 Long chain base2 Chromosome_3 + View
Theobroma cacao Thecc.04G044900 Long chain base2 Chromosome_4 + View
Tarenaya hassleriana THA.LOC104798919 long chain base biosynthesis protein 2a NW_010968505.1 + View
Tripterygium wilfordii TWI34G0005 NC_052235.1 - View
Vaccinium macrocarpon vmacro19160 Similar to Os11g0516000: Long chain base biosynthesis protein 2a (Oryza sativa subsp. japonica OX%3D39947) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01008621001 chr17 - View