Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0019138 PREDICTED: U-box domain-containing protein 11-like [Sesamum indicum] Chr10 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G10030 LG-4 + View
Aethionema arabicum Aa31LG7G7030 LG-7 + View
Acer truncatum Atru.chr11.435 chr11 + View
Actinidia chinensis Actinidia36676 Lachesis_group4 - View
Actinidia chinensis Actinidia14961 Lachesis_group14 + View
Arabidopsis lyrata AL2G30590 scaffold_2 - View
Arabidopsis lyrata AL1G36600 scaffold_1 + View
Avicennia marina MSTRG.2182 ScioBoG_102834_HRSCAF_103055 - View
Avicennia marina MSTRG.13577 ScioBoG_18778_HRSCAF_18863 + View
Amaranthus hybridus Ah.03g137260 AmaHy_arrow1_Scaffold_3 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HRHY9P PTHR23315//PTHR23315:SF52 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED arahy.Tifrunner.gnm1.Arahy.04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0GVW71 PTHR23315//PTHR23315:SF52 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED arahy.Tifrunner.gnm1.Arahy.14 - View
Arabidopsis thaliana AT1G71020 ARM repeat superfamily protein ARM repeat superfamily protein%3B FUNCTIONS IN: ubiquitin-protein ligase activity%2C binding%3B INVOLVED IN: protein ubiquitination%3B LOCATED IN: ubiquitin ligase complex%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo (InterPro:IPR000225)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G23030.1)%3B Has 6269 Blast hits to 4386 proteins in 290 species: Archae - 0%3B Bacteria - 18%3B Metazoa - 1236%3B Fungi - 624%3B Plants - 3669%3B Viruses - 3%3B Other Eukaryotes - 719 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G23030 ARM repeat superfamily protein ARM repeat superfamily protein%3B FUNCTIONS IN: ubiquitin-protein ligase activity%2C binding%3B INVOLVED IN: response to chitin%3B LOCATED IN: ubiquitin ligase complex%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo (InterPro:IPR000225)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G71020.1)%3B Has 7493 Blast hits to 5002 proteins in 288 species: Archae - 0%3B Bacteria - 26%3B Metazoa - 2087%3B Fungi - 726%3B Plants - 3867%3B Viruses - 3%3B Other Eukaryotes - 784 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB07g32300 ChrB07 + View
Brassica carinata BcaB03g14864 ChrB03 - View
Brassica carinata BcaB03g14174 ChrB03 - View
Brassica carinata BcaC05g26214 ChrC05 + View
Brassica napus C06p45140 C06 - View
Brassica napus A07p37430 A07 - View
Brassica napus C05p22240 C05 + View
Brassica napus A09p41690 A09 - View
Brassica oleracea BolC6t39571H C6 - View
Brassica oleracea BolC5t30924H C5 + View
Brassica rapa BraA07t31301Z A07 - View
Beta vulgaris EL10Ac6g14228 PTHR23315:SF52 - U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Chr6_EL10_PGA_scaffold0 - View
Capsicum annuum CAN.G1334.5 PGAv.1.6.scaffold1334 - View
Cicer arietinum L. Ca_18723_v3 Ca_LG6_v3 + View
Corylus avellana Haze_11014 Similar to PUB10: U-box domain-containing protein 10 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc11_g08810 U-box domain-containing protein 10 chr11 - View
Citrus clementina Ciclev10014584m.g scaffold_2 - View
Ceratophyllum demersum CDE05G1127 3 - View
Ceratophyllum demersum CDE05G3230 3 + View
Carpinus fangiana Cfa008599 Cfa03 + View
Cardamine hirsuta CARHR064310 U-box domain-containing protein 10 Chr2 - View
Cardamine hirsuta CARHR023410 U-box domain-containing protein 10 Chr1 + View
Carya illinoinensis CiPaw.05G248800 PTHR23315//PTHR23315:SF52 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Chr05 + View
Cucumis melo MELO3C005318.2 RING-type E3 ubiquitin transferase chr09 + View
Carica papaya Cpa.g.sc65.125 supercontig_65 + View
Chenopodium quinoa AUR62014201 PUB10: U-box domain-containing protein 10 C_Quinoa_Scaffold_3035 + View
Capsella rubella Carub.0001s2253 PTHR23315//PTHR23315:SF52 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED scaffold_1 + View
Capsella rubella Carub.0002s1783 PTHR23315//PTHR23315:SF52 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED scaffold_2 - View
Cucumis sativus L. CsaV3_5G028570 RING-type E3 ubiquitin transferase chr5 + View
Cucumis sativus L. CsaV3_5G013610 RING-type E3 ubiquitin transferase chr5 - View
Daucus carota DCAR_023611 hypothetical protein DCARv2_Chr7 - View
Daucus carota DCAR_007288 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_026770 hypothetical protein DCARv2_Chr8 - View
Davidia involucrata Dinv12997 GWHABJS00000008 - View
Davidia involucrata Dinv05164 GWHABJS00000018 + View
Durio zibethinus Duzib251G0104 NW_019167971.1 + View
Erigeron canadensis ECA233G5564 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA246G5272 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.G02194 Chr07 - View
Erythranthe guttata Migut.E00414 scaffold_5 + View
Eutrema salsugineum Thhalv10007104m.g PTHR23315:SF52 - U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED scaffold_5 - View
Eutrema salsugineum Thhalv10018269m.g KOG4642//KOG4646 - Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) // Uncharacterized conserved protein, contains ARM repeats scaffold_9 + View
Fragaria x ananassa FAN22G1930 PTHR23315:SF52 - U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Fvb4-1 + View
Fragaria x ananassa FAN07G2877 PTHR23315//PTHR23315:SF52 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Fvb4-4 + View
Fragaria x ananassa FAN17G1245 PTHR23315:SF52 - U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Fvb4-2 - View
Fragaria x ananassa FAN12G4249 PTHR23315//PTHR23315:SF52 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Fvb4-3 - View
Fragaria vesca FvH4_4g32300 PTHR23315:SF52 - U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Fvb4 + View
Gossypium hirsutum Gohir.A03G122500 PTHR23315//PTHR23315:SF52 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED A03 - View
Gossypium hirsutum Gohir.D01G145900 PTHR23315//PTHR23315:SF52 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED D01 - View
Gossypium hirsutum Gohir.A01G153100 PTHR23315//PTHR23315:SF52 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED A01 - View
Glycine max Glyma.07G216200 PTHR23315//PTHR23315:SF52 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Gm07 + View
Glycine max Glyma.20G013200 PTHR23315//PTHR23315:SF52 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Gm20 + View
Gossypium raimondii Gorai.002G180200 Chr02 - View
Helianthus annuus HanXRQChr08g0212691 Putative zinc finger, RING/FYVE/PHD-type; Armadillo-type fold HanXRQChr08 + View
Lupinus albus Lalb_Chr05g0219391 PTHR23315:SF52 - U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Lalb_Chr05 + View
Lupinus albus Lalb_Chr16g0384901 PTHR23315//PTHR23315:SF52 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Lalb_Chr16 + View
Lotus japonicus Lj4g0017059 PTHR23315:SF52 - U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED chr4 + View
Lonicera japonica Lj6A747G70 GWHAAZE00000006 - View
Lonicera japonica Lj3A874G70 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_8_43480 PTHR23315:SF52 - U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_3_54620 PTHR23315:SF52 - U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Lsat_1_v8_lg_3 - View
Malus domestica MD13G1026300 ARM repeat superfamily protein Chr13 - View
Malus domestica MD16G1029300 ARM repeat superfamily protein Chr16 - View
Manihot esculenta Manes.15G126900 Chromosome15 + View
Manihot esculenta Manes.17G075700 Chromosome17 + View
Medicago truncatula Medtr4g485520 armadillo/beta-catenin repeat protein chr4 - View
Nelumbo nucifera Nn4g24128 chr4 + View
Nelumbo nucifera Nn3g18206 chr3 + View
Nicotiana tabacum Nitab4.5_0004776g0040 Armadillo, Armadillo-like helical, Armadillo-type fold, Zinc finger, RING/FYVE/PHD-type, U box domain Nitab4.5_0004776 + View
Petunia axillaris Peaxi162Scf00253g01410 U-box domain-containing protein 10 Peaxi162Scf00253 - View
Punica granatum PGR119G1977 NC_045132.1 - View
Prunus persica Prupe.1G323500 PTHR23315:SF52 - U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Pp01 + View
Populus trichocarpa Potri.010G113900 PTHR23315//PTHR23315:SF52 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Chr10 - View
Populus trichocarpa Potri.008G128600 PTHR23315//PTHR23315:SF52 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Chr08 + View
Phaseolus vulgaris Phvul.002G092600 PTHR23315:SF52 - U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Chr02 + View
Quercus lobata QL01p001904 1 - View
Rosa chinensis RcHm_v2.0_Chr4g0441091 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim09G0098300 chr09 - View
Striga asiatica SGA_v2.0_scaffold50G18525 scaffold50 - View
Striga asiatica SGA_v2.0_scaffold38G15075 scaffold38 + View
Striga asiatica SGA_v2.0_scaffold39G15157 scaffold39 - View
Salvia bowleyana SalBow8G1830 GWHASIU00000004 - View
Salix brachista Sabra08G0097400 GWHAAZH00000008 + View
Salix brachista Sabra10G0083800 GWHAAZH00000010 - View
Simmondsia chinensis Sc04g0005660 GWHAASQ00000004 - View
Sechium edule Sed0019410 LG11 - View
Sapria himalayana SHI04698 scaffold6_19132642 + View
Solanum lycopersicum Solyc05g008230.3 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3B5V3_CAPCH) SL4.0ch05 - View
Solanum lycopersicum Solyc04g007640.3 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2WRT2_CAPBA) SL4.0ch04 + View
Schrenkiella parvula Sp1g20480 PTHR23315:SF52 - U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED ch1-1 + View
Schrenkiella parvula Sp5g26190 PTHR23315//PTHR23315:SF52 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED ch5-6 - View
Solanum pennellii Sopen04g002720 ARM repeat superfamily protein | FUNCTIONS IN: ubiquitin-protein ligase activity, binding | INVOLVED IN: protein ubiquitination | LOCATED IN: ubiquitin ligase complex | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: U box domain , Armadillo-like helical , Armadillo , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein Spenn-ch04 + View
Solanum pennellii Sopen05g004080 ARM repeat superfamily protein | FUNCTIONS IN: ubiquitin-protein ligase activity, binding | INVOLVED IN: response to chitin | LOCATED IN: ubiquitin ligase complex | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: U box domain , Armadillo-like helical , Armadillo , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein Spenn-ch05 - View
Solanum tuberosum PGSC0003DMG400030547 E3 ubiquitin ligase PUB14 ST4.03ch05 + View
Solanum tuberosum PGSC0003DMG400005987 E3 ubiquitin ligase PUB14 ST4.03ch04 + View
Selenicereus undatus Hund24986 Scaffold_3410 - View
Trochodendron aralioides TAR629G2870 group0 + View
Theobroma cacao Thecc.02G280200 U-box domain-containing protein 10 Chromosome_2 + View
Tarenaya hassleriana THA.LOC104823016 U-box domain-containing protein 11 NW_010966822.1 - View
Tripterygium wilfordii TWI79G1266 NC_052238.1 - View
Tripterygium wilfordii TWI31G1284 NC_052233.1 - View
Tripterygium wilfordii TWI75G0005 NC_052253.1 - View
Vaccinium macrocarpon vmacro10640 Similar to PUB10: U-box domain-containing protein 10 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01011767001 chr1 + View