Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0044601 PREDICTED: synaptotagmin-2 [Vitis vinifera] Chr9 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr13.261 chr13 + View
Actinidia chinensis Actinidia29757 Lachesis_group27 - View
Actinidia chinensis Actinidia15436 Lachesis_group26 + View
Actinidia chinensis Actinidia23589 Lachesis_group23 - View
Actinidia chinensis Actinidia31251 Lachesis_group16 - View
Actinidia chinensis Actinidia37939 Lachesis_group7 - View
Arabidopsis lyrata AL1G32890 scaffold_1 + View
Arabidopsis lyrata AL4G10120 scaffold_4 + View
Avicennia marina MSTRG.1179 ScioBoG_102833_HRSCAF_103052 + View
Avicennia marina MSTRG.25261 ScioBoG_4119_HRSCAF_4138 - View
Amaranthus hybridus Ah.01g022900 AmaHy_arrow1_Scaffold_1 - View
Amaranthus hybridus Ah.00g000310 Synaptotagmin-1 (NTMC2T1.1) (Synaptotagmin A) AmaHy_arrow1_Contig177_quiver - View
Amaranthus hybridus Ah.01g008500 AmaHy_arrow1_Scaffold_1 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XNK7YC PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED arahy.Tifrunner.gnm1.Arahy.06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.B5LLG6 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED arahy.Tifrunner.gnm1.Arahy.16 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.F25TPA PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.X1IMZB PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED arahy.Tifrunner.gnm1.Arahy.13 + View
Arabidopsis thaliana AT1G20080 Calcium-dependent lipid-binding (CaLB domain) family protein Encodes a synaptotagmin localized on the Golgi apparatus and that regulates protein secretion via the unconventional protein transport from the cytosol to the extracellular matrix in plant cells. SYTB%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029)%2C C2 calcium/lipid-binding domain%2C CaLB (InterPro:IPR008973)%2C C2 region (InterPro:IPR020477)%2C C2 calcium-dependent membrane targeting (InterPro:IPR000008)%3B BEST Arabidopsis thaliana protein match is: synaptotagmin A (TAIR:AT2G20990.1)%3B Has 7272 Blast hits to 5651 proteins in 270 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 4705%3B Fungi - 871%3B Plants - 1207%3B Viruses - 0%3B Other Eukaryotes - 489 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC07g39018 ChrC07 + View
Brassica carinata BcaB03g14338 ChrB03 + View
Brassica carinata BcaB03g12882 ChrB03 - View
Brassica napus C08p19910 C08 + View
Brassica napus A08p29510 A08 - View
Brassica napus A07p16000 A07 - View
Brassica oleracea BolC7t42870H C7 - View
Brassica oleracea BolC8t49629H C8 + View
Brassica rapa BraA08t34888Z A08 - View
Brassica rapa BraA07t29329Z A07 - View
Beta vulgaris EL10Ac9g21392 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Chr9_EL10_PGA_scaffold8 + View
Beta vulgaris EL10Ac1g02167 PTHR10774//PTHR10774:SF50 - EXTENDED SYNAPTOTAGMIN-RELATED // SYNAPTOTAGMIN-1-RELATED Chr1_EL10_PGA_scaffold3 + View
Corylus avellana Haze_22660 Similar to SYT2: Synaptotagmin-2 (Arabidopsis thaliana OX%3D3702) 3 - View
Corylus avellana Haze_02150 Similar to SYT1: Synaptotagmin-1 (Arabidopsis thaliana OX%3D3702) 1 + View
Coffea canephora Cc10_g01460 Putative Extended synaptotagmin-1 chr10 + View
Citrus clementina Ciclev10028159m.g scaffold_8 + View
Citrus clementina Ciclev10000806m.g scaffold_5 - View
Ceratophyllum demersum CDE09G0576 7 + View
Ceratophyllum demersum CDE05G0159 3 + View
Cardamine hirsuta CARHR020560 Synaptotagmin-7 Chr1 + View
Cardamine hirsuta CARHR111870 Synaptotagmin A Chr4 + View
Carya illinoinensis CiPaw.06G122800 KOG1012 - Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain Chr06 + View
Carya illinoinensis CiPaw.05G081200 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Chr05 - View
Carya illinoinensis CiPaw.08G067300 KOG1012 - Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain Chr08 - View
Carya illinoinensis CiPaw.07G147500 KOG1012 - Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain Chr07 + View
Citrullus lanatus ClCG02G004170 Synaptotagmin-7 CG_Chr02 + View
Citrullus lanatus ClCG08G014200 Synaptotagmin-7 CG_Chr08 + View
Cucumis melo MELO3C013361.2 synaptotagmin-2-like chr01 + View
Corchorus olitorius COL.COLO4_26125 C2 calcium-dependent membrane targeting AWUE01019207.1 + View
Carica papaya Cpa.g.sc26.308 supercontig_26 + View
Chenopodium quinoa AUR62040555 SYT1: Synaptotagmin-1 C_Quinoa_Scaffold_1354 - View
Chenopodium quinoa AUR62013043 SYT1: Synaptotagmin-1 C_Quinoa_Scaffold_1040 + View
Chenopodium quinoa AUR62041479 SYT1: Synaptotagmin-1 C_Quinoa_Scaffold_1393 + View
Chenopodium quinoa AUR62010052 SYT1: Synaptotagmin-1 C_Quinoa_Scaffold_1257 + View
Capsella rubella Carub.0004s0006 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED scaffold_4 + View
Capsella rubella Carub.0001s1961 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED scaffold_1 + View
Cucumis sativus L. CsaV3_7G000940 synaptotagmin-2-like chr7 - View
Daucus carota DCAR_013880 hypothetical protein DCARv2_Chr4 + View
Daucus carota DCAR_009493 hypothetical protein DCARv2_Chr3 - View
Daucus carota DCAR_016729 hypothetical protein DCARv2_Chr5 - View
Daucus carota DCAR_003165 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv14099 GWHABJS00000005 + View
Davidia involucrata Dinv39535 GWHABJS00000011 - View
Davidia involucrata Dinv41948 GWHABJS00000002 - View
Durio zibethinus Duzib093G0688 NW_019167937.1 - View
Durio zibethinus Duzib041G0310 NW_019167826.1 + View
Durio zibethinus Duzib052G0637 NW_019167849.1 - View
Erigeron canadensis ECA233G1080 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.H00962 Chr06 + View
Eucalyptus grandis Eucgr.I01409 Chr09 - View
Erythranthe guttata Migut.B00087 scaffold_2 + View
Erythranthe guttata Migut.C00857 scaffold_3 - View
Eutrema salsugineum Thhalv10007306m.g PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED scaffold_5 - View
Eutrema salsugineum Thhalv10000116m.g PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED scaffold_15 + View
Fragaria x ananassa FAN27G2624 PTHR10774//PTHR10774:SF50 - EXTENDED SYNAPTOTAGMIN-RELATED // SYNAPTOTAGMIN-1-RELATED Fvb2-1 + View
Fragaria x ananassa FAN20G0588 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Fvb2-3 - View
Fragaria x ananassa FAN15G3521 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Fvb2-4 - View
Fragaria vesca FvH4_2g38220 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Fvb2 + View
Gossypium hirsutum Gohir.A05G185400 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED A05 + View
Gossypium hirsutum Gohir.D02G098400 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED D02 - View
Gossypium hirsutum Gohir.D05G188200 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED D05 + View
Glycine max Glyma.14G220000 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Gm14 - View
Glycine max Glyma.17G259000 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Gm17 - View
Gossypium raimondii Gorai.005G112200 Chr05 - View
Gossypium raimondii Gorai.009G193500 Chr09 + View
Helianthus annuus HanXRQChr13g0387181 Putative C2 domain; Synaptotagmin-like mitochondrial-lipid-binding domain HanXRQChr13 + View
Hydrangea macrophylla Hma1.2p1_0733F.1_g210190 Hma1.2p1_0733F.1 + View
Lupinus albus Lalb_Chr01g0008601 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Lalb_Chr01 + View
Lupinus albus Lalb_Chr19g0139151 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Lalb_Chr19 + View
Lotus japonicus Lj5g0003811 KOG1012 - Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain chr5 - View
Lonicera japonica Lj4C799T2 GWHAAZE00000004 - View
Lonicera japonica Lj4A21T60 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_0_1300 Lsat_1_v8_lg_0 - View
Lactuca sativa Lsat_1_v5_gn_8_30100 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Lsat_1_v8_lg_8 + View
Malus domestica MD15G1010700 Calcium-dependent lipid-binding (CaLB domain) family protein Chr15 + View
Malus domestica MD08G1010600 Calcium-dependent lipid-binding (CaLB domain) family protein Chr08 + View
Malus domestica MD05G1120700 Calcium-dependent lipid-binding (CaLB domain) family protein Chr05 - View
Manihot esculenta Manes.04G075000 Chromosome04 + View
Manihot esculenta Manes.05G145400 Chromosome05 + View
Medicago truncatula Medtr1g025550 calcium-dependent lipid-binding (CaLB domain) family protein chr1 - View
Nelumbo nucifera Nn5g30767 chr5 - View
Nelumbo nucifera Nn6g32003 chr6 + View
Olea europaea Oeu007362.3 chr5 + View
Olea europaea Oeu055664.1 chr15 - View
Oryza sativa ssp. japonica Os09g0538800 Similar to Synaptotagmin C. Similar to calcium lipid binding protein-like. chr09 - View
Petunia axillaris Peaxi162Scf00064g00735 Calcium-dependent lipid-binding (CaLB domain) family protein Peaxi162Scf00064 - View
Petunia axillaris Peaxi162Scf00362g00720 Calcium-dependent lipid-binding (CaLB domain) family protein Peaxi162Scf00362 + View
Punica granatum PGR031G1596 NC_045127.1 + View
Punica granatum PGR142G0132 NC_045128.1 + View
Prunus persica Prupe.1G363200 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Pp01 + View
Prunus persica Prupe.8G164600 Pp08 - View
Papaver somniferum PSO675G8975 NC_039358.1 + View
Populus trichocarpa Potri.002G019800 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Chr02 + View
Populus trichocarpa Potri.005G241700 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Chr05 - View
Populus trichocarpa Potri.004G174600 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Chr04 - View
Phaseolus vulgaris Phvul.011G035100 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Chr11 - View
Phaseolus vulgaris Phvul.001G005500 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Chr01 - View
Quercus lobata QL02p012108 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr6g0303161 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim05G0060700 chr05 + View
Striga asiatica SGA_v2.0_scaffold92G28208 scaffold92 + View
Striga asiatica SGA_v2.0_scaffold58G20377 scaffold58 + View
Striga asiatica SGA_v2.0_scaffold19G08550 scaffold19 - View
Salvia bowleyana SalBow8G5276 GWHASIU00000004 + View
Salvia bowleyana SalBow7G3143 GWHASIU00000005 + View
Salix brachista Sabra09G0103900 GWHAAZH00000009 - View
Salix brachista Sabra02G0016100 GWHAAZH00000002 + View
Salix brachista Sabra05G0187100 GWHAAZH00000005 - View
Simmondsia chinensis Sc18g0006470 GWHAASQ00000018 + View
Sechium edule Sed0013140 LG03 + View
Sechium edule Sed0001294 LG11 - View
Solanum lycopersicum Solyc12g089330.2 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A1P8BD17_ARATH) SL4.0ch12 - View
Solanum lycopersicum Solyc01g111520.3 Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** A0A1P8BD17_ARATH) SL4.0ch01 - View
Schrenkiella parvula Sp4g00180 PTHR10774//PTHR10774:SF50 - EXTENDED SYNAPTOTAGMIN-RELATED // SYNAPTOTAGMIN-1-RELATED ch4-1 + View
Schrenkiella parvula Sp1g17850 PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED ch1-1 + View
Solanum pennellii Sopen12g031190 Encodes a plasma membrane localized protein with similarity to synaptotagmins, a class of membrane trafficking proteins. SYT1 is expressed in all tissues. Loss of function mutations show hypersensitivity to NaCl and electrolyte leakage from the plasma membrane. SYT1 also affects calcium dependent freezing tolerance. SYT1 probably plays a role in membrane repair such as membrane resealing after freezing induced damage. Regulates endocytosis endosome recycling at the plasma membrane, but not membrane traffic along the secretory pathway. | synaptotagmin A (SYTA) | CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein , C2 calcium/lipid-binding domain, CaLB , C2 region , C2 calcium-dependent membrane targeting | BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein . Spenn-ch12 - View
Solanum pennellii Sopen01g053560 Encodes a plasma membrane localized protein with similarity to synaptotagmins, a class of membrane trafficking proteins. SYT1 is expressed in all tissues. Loss of function mutations show hypersensitivity to NaCl and electrolyte leakage from the plasma membrane. SYT1 also affects calcium dependent freezing tolerance. SYT1 probably plays a role in membrane repair such as membrane resealing after freezing induced damage. Regulates endocytosis endosome recycling at the plasma membrane, but not membrane traffic along the secretory pathway. | synaptotagmin A (SYTA) | CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein , C2 calcium/lipid-binding domain, CaLB , C2 region , C2 calcium-dependent membrane targeting | BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein . Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400029335 Plant synaptotagmin ST4.03ch12 - View
Selenicereus undatus Hund05176 Scaffold_19641 + View
Trochodendron aralioides TAR376G0832 group14 - View
Trochodendron aralioides TAR628G0892 group5 - View
Theobroma cacao Thecc.08G046700 Calcium-dependent lipid-binding (CaLB domain) family protein Chromosome_8 - View
Tarenaya hassleriana THA.LOC104824767 synaptotagmin-1 NW_010966933.1 + View
Tarenaya hassleriana THA.LOC104811425 synaptotagmin-2-like NW_010965372.1 + View
Tarenaya hassleriana THA.LOC104809535 synaptotagmin-2 isoform X1 NW_010960187.1 + View
Trifolium pratense TPR.G26382 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI56G0143 NC_052242.1 - View
Vaccinium macrocarpon vmacro17355 Similar to SYT1: Synaptotagmin-1 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro04367 Similar to SYT2: Synaptotagmin-2 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1127G0105 CM024076.1 - View
Vigna mungo VMungo0647G0879 CM024073.1 - View
Vigna mungo VMungo1309G0404 CM024072.1 - View
Vitis vinifera GSVIVG01009939001 chr18 - View
Vitis vinifera GSVIVG01024034001 chr3 - View
Zea mays Zm00001eb103760 Zm00001e010253 Calcium lipid binding protein-like 2 - View
Zea mays Zm00001eb332000 Zm00001e035989 Synaptotagmin-2 7 + View