Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0012454 hypothetical protein CICLE_v10004309mg [Citrus clementina] Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr1.165 chr1 - View
Actinidia chinensis Actinidia35430 Lachesis_group2 + View
Actinidia chinensis Actinidia37115 Lachesis_group9 + View
Actinidia chinensis Actinidia12785 Lachesis_group19 + View
Actinidia chinensis Actinidia07357 Lachesis_group10 - View
Arabidopsis lyrata AL3G24590 scaffold_3 + View
Avicennia marina MSTRG.14546 ScioBoG_18782_HRSCAF_18867 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XP10PA K03234 - elongation factor 2 (EEF2) arahy.Tifrunner.gnm1.Arahy.07 - View
Arabidopsis thaliana AT1G56070 Ribosomal protein S5/Elongation factor G/III/V family protein encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive. LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1)%3B FUNCTIONS IN: translation factor activity%2C nucleic acid binding%2C copper ion binding%2C translation elongation factor activity%3B INVOLVED IN: response to cold%3B LOCATED IN: cytosol%2C nucleolus%2C chloroplast%2C plasma membrane%2C membrane%3B EXPRESSED IN: 29 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein synthesis factor%2C GTP-binding (InterPro:IPR000795)%2C Translation elongation factor EFG/EF2%2C domain IV (InterPro:IPR005517)%2C Translation elongation factor EFG/EF2%2C C-terminal (InterPro:IPR000640)%2C Translation elongation factor EFTu/EF1A%2C domain 2 (InterPro:IPR004161)%2C Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568)%2C Ribosomal protein S5 domain 2-type fold%2C subgroup (InterPro:IPR014721)%2C Elongation factor G/III/V (InterPro:IPR009022)%2C Translation elongation/initiation factor/Ribosomal%2C beta-barrel (InterPro:IPR009000)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT3G12915.1)%3B Has 64297 Blast hits to 57476 proteins in 4618 species: Archae - 1324%3B Bacteria - 41101%3B Metazoa - 3172%3B Fungi - 1934%3B Plants - 1269%3B Viruses - 1%3B Other Eukaryotes - 15496 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT3G12915 Ribosomal protein S5/Elongation factor G/III/V family protein Ribosomal protein S5/Elongation factor G/III/V family protein%3B FUNCTIONS IN: GTP binding%2C GTPase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A%2C domain 2 (InterPro:IPR004161)%2C Translation elongation factor EFG/EF2%2C C-terminal (InterPro:IPR000640)%2C Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568)%2C Protein synthesis factor%2C GTP-binding (InterPro:IPR000795)%2C Elongation factor G/III/V (InterPro:IPR009022)%2C Translation elongation/initiation factor/Ribosomal%2C beta-barrel (InterPro:IPR009000)%2C Translation elongation factor EFG/EF2%2C domain IV (InterPro:IPR005517)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1)%3B Has 62937 Blast hits to 55974 proteins in 4670 species: Archae - 1189%3B Bacteria - 40681%3B Metazoa - 3235%3B Fungi - 1899%3B Plants - 1092%3B Viruses - 1%3B Other Eukaryotes - 14840 (source: NCBI BLink). Ribosomal protein S5/Elongation factor G/III/V family protein%3B FUNCTIONS IN: GTP binding%2C GTPase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Protein synthesis factor%2C GTP-binding (InterPro:IPR000795)%2C Translation elongation factor EFG/EF2%2C domain IV (InterPro:IPR005517)%2C Translation elongation factor EFG/EF2%2C C-terminal (InterPro:IPR000640)%2C Translation elongation factor EFTu/EF1A%2C domain 2 (InterPro:IPR004161)%2C Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568)%2C Elongation factor G/III/V (InterPro:IPR009022)%2C Translation elongation/initiation factor/Ribosomal%2C beta-barrel (InterPro:IPR009000)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1). Chr3 + View
Brassica napus C06p53000 C06 - View
Brassica rapa BraA07t31934Z A07 - View
Beta vulgaris EL10Ac2g03330 K03234 - elongation factor 2 (EEF2) Chr2_EL10_PGA_scaffold6 - View
Cannabis sativa CANSAT80G2373 NC_044372.1 + View
Cicer arietinum L. Ca_03668_v3 Ca_LG1_v3 + View
Coffea canephora Cc05_g16160 Elongation factor 2 chr5 - View
Citrus clementina Ciclev10004309m.g scaffold_9 - View
Citrus clementina Ciclev10018844m.g scaffold_3 + View
Cardamine hirsuta CARHR045790 Elongation factor EF-2 Chr1 - View
Carya illinoinensis CiPaw.11G065800 K03234 - elongation factor 2 (EEF2) Chr11 + View
Cucumis melo MELO3C019668.2 elongation factor 2 chr11 - View
Capsella rubella Carub.0001s4467 K03234 - elongation factor 2 (EEF2) scaffold_1 - View
Cucumis sativus L. CsaV3_6G013750 Elongation factor 2 chr6 + View
Daucus carota DCAR_016826 hypothetical protein DCARv2_Chr5 - View
Daucus carota DCAR_009642 hypothetical protein DCARv2_Chr3 - View
Daucus carota DCAR_019928 hypothetical protein DCARv2_Chr6 - View
Durio zibethinus Duzib187G1701 NW_019167860.1 + View
Durio zibethinus Duzib268G0503 NW_019168270.1 + View
Erigeron canadensis ECA236G3585 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.F01462 Chr06 - View
Erythranthe guttata Migut.H01687 scaffold_8 + View
Eutrema salsugineum Thhalv10011235m.g K03234 - elongation factor 2 (EEF2) scaffold_7 + View
Fragaria x ananassa FAN16G0212 K03234 - elongation factor 2 (EEF2) Fvb3-3 + View
Fragaria x ananassa FAN25G1519 K03234 - elongation factor 2 (EEF2) Fvb3-1 - View
Fragaria x ananassa FAN11G1638 K03234 - elongation factor 2 (EEF2) Fvb3-4 - View
Fragaria x ananassa FAN21G2228 K03234 - elongation factor 2 (EEF2) Fvb3-2 + View
Fragaria vesca FvH4_3g15630 K03234 - elongation factor 2 (EEF2) Fvb3 + View
Gossypium hirsutum Gohir.A13G152900 K03234 - elongation factor 2 (EEF2) A13 + View
Gossypium hirsutum Gohir.D13G157200 K03234 - elongation factor 2 (EEF2) D13 + View
Gossypium hirsutum Gohir.D01G027300 K03234 - elongation factor 2 (EEF2) D01 - View
Gossypium hirsutum Gohir.A01G039500 K03234 - elongation factor 2 (EEF2) A01 - View
Glycine max Glyma.15G256900 PTHR23115//PTHR23115:SF187 - TRANSLATION FACTOR // ELONGATION FACTOR 2 Gm15 - View
Glycine max Glyma.08G170000 K03234 - elongation factor 2 (EEF2) Gm08 + View
Gossypium raimondii Gorai.002G036600 Chr02 - View
Gossypium raimondii Gorai.013G178000 Chr13 + View
Helianthus annuus HanXRQChr11g0334971 Probable ribosomal protein S5/Elongation factor G/III/V family protein HanXRQChr11 + View
Helianthus annuus HanXRQChr05g0160611 Putative translation elongation factor EFG/EF2; P-loop containing nucleoside triphosphate hydrolase; Tr-type G domain, conserved site HanXRQChr05 + View
Hydrangea macrophylla Hma1.2p1_0637F.1_g193500 Hma1.2p1_0637F.1 + View
Hydrangea macrophylla Hma1.2p1_0334F.1_g128700 Hma1.2p1_0334F.1 + View
Lupinus albus Lalb_Chr25g0284901 K03234 - elongation factor 2 (EEF2) Lalb_Chr25 + View
Lupinus albus Lalb_Chr03g0031761 K03234 - elongation factor 2 (EEF2) Lalb_Chr03 + View
Lupinus albus Lalb_Chr20g0108681 K03234 - elongation factor 2 (EEF2) Lalb_Chr20 + View
Lupinus albus Lalb_Chr01g0015911 K03234 - elongation factor 2 (EEF2) Lalb_Chr01 + View
Lotus japonicus Lj3g0024153 K03234 - elongation factor 2 (EEF2) chr3 - View
Lonicera japonica Lj8A188T55 GWHAAZE00000008 - View
Lonicera japonica Lj1A906T50 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_7_112421 Lsat_1_v8_lg_7 + View
Malus domestica MD05G1220800 Ribosomal protein S5/Elongation factor G/III/V family protein Chr05 - View
Malus domestica MD10G1203200 Ribosomal protein S5/Elongation factor G/III/V family protein Chr10 - View
Manihot esculenta Manes.06G172600 Chromosome06 - View
Manihot esculenta Manes.14G016900 Chromosome14 + View
Medicago truncatula Medtr2g069050 translation elongation factor EF-2 subunit chr2 + View
Olea europaea Oeu051999.1 chr13 + View
Olea europaea Oeu002803.1 chr10 - View
Petunia axillaris Peaxi162Scf00452g00840 Elongation factor 2 Peaxi162Scf00452 + View
Punica granatum PGR031G0094 NC_045127.1 + View
Prunus persica Prupe.4G138700 Pp04 + View
Pisum sativum Psat1g012200 Elongation factor Tu GTP binding domain chr1LG6 - View
Populus trichocarpa Potri.005G098100 K03234 - elongation factor 2 (EEF2) Chr05 + View
Phaseolus vulgaris Phvul.005G058000 K03234 - elongation factor 2 (EEF2) Chr05 - View
Quercus lobata QL04p076657 4 - View
Rosa chinensis RcHm_v2.0_Chr5g0026251 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim06G0239600 chr06 - View
Salvia bowleyana SalBow8G1690 GWHASIU00000004 - View
Salix brachista Sabra05G0080400 GWHAAZH00000005 + View
Schrenkiella parvula Sp5g34180 PTHR23115//PTHR23115:SF136 - TRANSLATION FACTOR // SUBFAMILY NOT NAMED ch5-7 - View
Selenicereus undatus Hund12455 Scaffold_33679 + View
Trochodendron aralioides TAR626G1443 group3 + View
Theobroma cacao Thecc.07G151100 Ribosomal protein S5/Elongation factor G/III/V family protein Chromosome_7 + View
Tarenaya hassleriana THA.LOC104808125 elongation factor 2-like NW_010964598.1 - View
Tarenaya hassleriana THA.LOC104815718 elongation factor 2 NW_010965696.1 - View
Tarenaya hassleriana THA.LOC104812359 elongation factor 2-like NW_010965372.1 - View
Trifolium pratense TPR.G9739 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI38G0885 NC_052252.1 + View
Tripterygium wilfordii TWI39G0370 NC_052250.1 + View
Tripterygium wilfordii TWI38G0711 NC_052252.1 - View
Utricularia gibba unitig_8.g4764 unitig_8 + View
Vaccinium macrocarpon vmacro09781 Similar to Elongation factor 2 (Beta vulgaris OX%3D161934) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro11672 Similar to LOS1: Elongation factor 2 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1080G1563 CM024079.1 + View
Vitis vinifera GSVIVG01020404001 chr19 - View