Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0004144 PREDICTED: uncharacterized protein LOC100255130 [Vitis vinifera] Chr5 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G3830 LG-8 + View
Acer truncatum Atru.chr4.2914 chr4 + View
Actinidia chinensis Actinidia40301 Lachesis_group22 + View
Arabidopsis lyrata AL3G29680 scaffold_3 + View
Avicennia marina MSTRG.10119 ScioBoG_12795_HRSCAF_12848 + View
Aquilegia oxysepala Aqoxy5G00792 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TZ6N57 PTHR22904//PTHR22904:SF169 - TPR REPEAT CONTAINING PROTEIN // RNA POLYMERASE II-ASSOCIATED PROTEIN 3 arahy.Tifrunner.gnm1.Arahy.11 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.T7VR84 PTHR22904//PTHR22904:SF169 - TPR REPEAT CONTAINING PROTEIN // RNA POLYMERASE II-ASSOCIATED PROTEIN 3 arahy.Tifrunner.gnm1.Arahy.01 - View
Arabidopsis thaliana AT3G16760 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B FUNCTIONS IN: binding%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%3B BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-III (TAIR:AT3G17970.1)%3B Has 16833 Blast hits to 9400 proteins in 880 species: Archae - 41%3B Bacteria - 5141%3B Metazoa - 4120%3B Fungi - 1882%3B Plants - 1008%3B Viruses - 50%3B Other Eukaryotes - 4591 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC09g48634 ChrC09 + View
Brassica carinata BcaC05g28855 ChrC05 - View
Brassica napus C01p47550 C01 - View
Brassica napus A01p37530 A01 - View
Brassica oleracea BolC1t04724H C1 - View
Brassica rapa BraA01t03813Z A01 - View
Beta vulgaris EL10Ac3g06659 PTHR22904:SF169 - RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Chr3_EL10_PGA_scaffold7 - View
Capsicum annuum CAN.G14.19 PGAv.1.6.scaffold14 - View
Cannabis sativa CANSAT78G0145 NC_044376.1 + View
Cicer arietinum L. Ca_21476_v3 Ca_LG7_v3 - View
Corylus avellana Haze_01151 Similar to TOC64: Translocon at the outer membrane of chloroplasts 64 (Pisum sativum OX%3D3888) 1 - View
Coffea canephora Cc03_g01460 Tetratricopeptide repeat (TPR)-like superfamily protein chr3 - View
Citrus clementina Ciclev10004804m.g scaffold_9 - View
Carpinus fangiana Cfa015433 Cfa06 + View
Cardamine hirsuta CARHR092010 Tetratricopeptide repeat-containing protein Chr3 + View
Carya illinoinensis CiPaw.01G145000 PTHR22904//PTHR22904:SF169 - TPR REPEAT CONTAINING PROTEIN // RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Chr01 - View
Citrullus lanatus ClCG05G006280 Tetratricopeptide repeat-containing protein CG_Chr05 + View
Cucumis melo MELO3C006687.2 Sperm-associated antigen 1 chr06 + View
Carica papaya Cpa.g.sc50.151 supercontig_50 - View
Chenopodium quinoa AUR62018055 spag1a: Sperm-associated antigen 1A C_Quinoa_Scaffold_2048 + View
Capsella rubella Carub.0003s1647 PTHR22904//PTHR22904:SF169 - TPR REPEAT CONTAINING PROTEIN // RNA POLYMERASE II-ASSOCIATED PROTEIN 3 scaffold_3 + View
Cucumis sativus L. CsaV3_3G014910 exopolygalacturonase-like chr3 + View
Daucus carota DCAR_002485 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv29717 GWHABJS00000016 - View
Davidia involucrata Dinv44345 GWHABJS00000014 + View
Durio zibethinus Duzib212G0552 NW_019168026.1 - View
Durio zibethinus Duzib151G0580 NW_019167904.1 + View
Eucalyptus grandis Eucgr.B01574 Chr02 + View
Erythranthe guttata Migut.N00070 scaffold_14 - View
Eutrema salsugineum Thhalv10020624m.g PTHR22904:SF169 - RNA POLYMERASE II-ASSOCIATED PROTEIN 3 scaffold_13 - View
Fragaria x ananassa FAN12G2548 PTHR22904:SF169 - RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Fvb4-3 + View
Fragaria x ananassa FAN07G1609 PTHR22904:SF169 - RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Fvb4-4 - View
Fragaria x ananassa FAN12G3921 PTHR22904:SF169 - RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Fvb4-3 - View
Fragaria x ananassa FAN17G0801 PTHR22904//PTHR22904:SF169 - TPR REPEAT CONTAINING PROTEIN // RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Fvb4-2 - View
Fragaria vesca FvH4_4g18770 PTHR22904:SF169 - RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Fvb4 + View
Gossypium hirsutum Gohir.A10G166900 PTHR22904//PTHR22904:SF169 - TPR REPEAT CONTAINING PROTEIN // RNA POLYMERASE II-ASSOCIATED PROTEIN 3 A10 + View
Gossypium hirsutum Gohir.D10G172900 PTHR22904//PTHR22904:SF169 - TPR REPEAT CONTAINING PROTEIN // RNA POLYMERASE II-ASSOCIATED PROTEIN 3 D10 + View
Glycine max Glyma.17G028900 PTHR22904//PTHR22904:SF169 - TPR REPEAT CONTAINING PROTEIN // RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Gm17 + View
Glycine max Glyma.07G244900 PTHR22904//PTHR22904:SF169 - TPR REPEAT CONTAINING PROTEIN // RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Gm07 - View
Gossypium raimondii Gorai.011G193400 Chr11 + View
Lupinus albus Lalb_Chr13g0298181 PTHR22904//PTHR22904:SF169 - TPR REPEAT CONTAINING PROTEIN // RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Lalb_Chr13 + View
Lupinus albus Lalb_Chr07g0182271 PTHR22904:SF169 - RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Lalb_Chr07 - View
Lotus japonicus Lj4g0013254 PTHR22904:SF169 - RNA POLYMERASE II-ASSOCIATED PROTEIN 3 chr4 + View
Lonicera japonica Lj3A825T23 GWHAAZE00000003 + View
Lactuca sativa Lsat_1_v5_gn_6_78121 PTHR22904:SF169 - RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Lsat_1_v8_lg_6 - View
Magnolia biondii MBI18_g21793_MAGBIO AED:0.05 Chr18 + View
Malus domestica MD13G1163500 Tetratricopeptide repeat (TPR)-like superfamily protein Chr13 - View
Malus domestica MD16G1163000 Tetratricopeptide repeat (TPR)-like superfamily protein Chr16 - View
Manihot esculenta Manes.15G010100 Chromosome15 - View
Manihot esculenta Manes.03G199200 Chromosome03 + View
Medicago truncatula Medtr4g120360 TPR repeat protein chr4 + View
Nelumbo nucifera Nn4g25745 chr4 - View
Nelumbo nucifera Nn3g21558 chr3 + View
Olea europaea Oeu006424.1 chr4 + View
Olea europaea Oeu054004.1 chr22 + View
Petunia axillaris Peaxi162Scf00065g01121 Tetratricopeptide repeat (TPR)-like superfamily protein Peaxi162Scf00065 - View
Punica granatum PGR031G2493 NC_045127.1 + View
Prunus persica Prupe.1G130400 PTHR22904:SF169 - RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Pp01 - View
Papaver somniferum PSO210G6439 NC_039359.1 - View
Populus trichocarpa Potri.010G007000 PTHR22904//PTHR22904:SF169 - TPR REPEAT CONTAINING PROTEIN // RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Chr10 - View
Phaseolus vulgaris Phvul.003G107800 PTHR22904:SF169 - RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Chr03 + View
Quercus lobata QL06p010760 6 + View
Rosa chinensis RcHm_v2.0_Chr4g0423561 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim04G0227400 chr04 + View
Striga asiatica SGA_v2.0_scaffold119G32699 scaffold119 - View
Striga asiatica SGA_v2.0_scaffold91G28032 scaffold91 + View
Salvia bowleyana SalBow5G0238 GWHASIU00000003 - View
Salix brachista Sabra10G0005700 GWHAAZH00000010 - View
Simmondsia chinensis Sc13g0003160 GWHAASQ00000013 - View
Sechium edule Sed0007282 LG02 - View
Solanum lycopersicum Solyc01g066050.3 Tetratricopeptide repeat-containing domain (AHRD V3.3 *** A0A200PWL4_9MAGN) SL4.0ch01 - View
Schrenkiella parvula Sp3g15010 PTHR22904//PTHR22904:SF169 - TPR REPEAT CONTAINING PROTEIN // RNA POLYMERASE II-ASSOCIATED PROTEIN 3 ch3-1 + View
Selenicereus undatus Hund20516 Scaffold_33673 + View
Trochodendron aralioides TAR633G1627 group2 + View
Trochodendron aralioides TAR362G1179 group17 - View
Theobroma cacao Thecc.04G290100 Chaperone binding protein Chromosome_4 + View
Tarenaya hassleriana THA.LOC104802587 uncharacterized transmembrane protein DDB_G0289901 NW_010970490.1 + View
Tripterygium wilfordii TWI09G1342 NC_052245.1 + View
Tripterygium wilfordii TWI73G0620 NC_052232.1 - View
Vigna mungo VMungo1215G2854 CM024074.1 - View
Vitis vinifera GSVIVG01035100001 chr5 - View