Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0006504 Protein SGT1-B-like protein [Morus notabilis] Chr12 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr1.332 chr1 - View
Acer truncatum Atru.chr9.2108 chr9 - View
Acer truncatum Atru.ctg97_1.48 ctg97_1 + View
Actinidia chinensis Actinidia08592 Lachesis_group6 - View
Actinidia chinensis Actinidia31845 Lachesis_group21 + View
Actinidia chinensis Actinidia03143 Lachesis_group3 + View
Avicennia marina MSTRG.8480 ScioBoG_102841_HRSCAF_103114 + View
Avicennia marina MSTRG.8696 ScioBoG_11560_HRSCAF_11609 - View
Amaranthus hybridus Ah.07g206400 Protein SGT1 homolog B (AtSGT1b) (Protein ENHANCED DOWNY MILDEW 1) (Protein ENHANCER OF TIR1-1 AUXIN RESISTANCE 3) (Suppressor of G2 allele of SKP1 homolog B) AmaHy_arrow1_Scaffold_7 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MU20M7 PF00515//PF04969//PF05002//PF13414 - Tetratricopeptide repeat (TPR_1) // CS domain (CS) // SGS domain (SGS) // TPR repeat (TPR_11) arahy.Tifrunner.gnm1.Arahy.19 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.4FT00Z K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DRAR7X K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A992JM K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) arahy.Tifrunner.gnm1.Arahy.05 + View
Arabidopsis thaliana AT4G23570 phosphatase-like protein Closely related to SGT1B%2C may function in SCF(TIR1) mediated protein degradation. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance. AtSGT1a is induced upon pathogen infection and can function in R gene-mediated resistance. SGT1A%3B FUNCTIONS IN: protein binding%3B INVOLVED IN: defense response%2C ubiquitin-dependent protein catabolic process%2C embryo development ending in seed dormancy%3B LOCATED IN: SCF ubiquitin ligase complex%2C nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%2C SGS (InterPro:IPR007699)%2C HSP20-like chaperone (InterPro:IPR008978)%2C CS domain (InterPro:IPR017447)%2C CS-like domain (InterPro:IPR007052)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%2C Tetratricopeptide repeat (InterPro:IPR019734)%3B BEST Arabidopsis thaliana protein match is: phosphatase-related (TAIR:AT4G11260.1)%3B Has 12440 Blast hits to 8629 proteins in 714 species: Archae - 442%3B Bacteria - 3949%3B Metazoa - 2875%3B Fungi - 1120%3B Plants - 1288%3B Viruses - 0%3B Other Eukaryotes - 2766 (source: NCBI BLink). Chr4 + View
Beta vulgaris EL10Ac3g05391 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Chr3_EL10_PGA_scaffold7 - View
Cannabis sativa CANSAT21G0043 NC_044374.1 + View
Corylus avellana Haze_08751 Similar to SGT1B: Protein SGT1 homolog B (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc02_g02210 Protein SGT1 homolog chr2 - View
Citrus clementina Ciclev10005190m.g scaffold_9 + View
Ceratophyllum demersum CDE10G0454 8 - View
Ceratophyllum demersum CDE04G2043 2 - View
Carpinus fangiana Cfa016307 Cfa06 + View
Carpinus fangiana Cfa012250 Cfa05 + View
Carya illinoinensis CiPaw.12G088900 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Chr12 - View
Carya illinoinensis CiPaw.06G004400 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Chr06 + View
Citrullus lanatus ClCG05G008510 SGT1 CG_Chr05 + View
Cucumis melo MELO3C006948.2 Protein SGT1 homolog chr06 - View
Carica papaya Cpa.g.sc3.1 supercontig_3 + View
Chenopodium quinoa AUR62031443 SGT1B: Protein SGT1 homolog B C_Quinoa_Scaffold_2963 + View
Chenopodium quinoa AUR62021095 SGT1B: Protein SGT1 homolog B C_Quinoa_Scaffold_1783 - View
Cucumis sativus L. CsaV3_3G017600 protein SGT1 homolog chr3 + View
Davidia involucrata Dinv37592 GWHABJS00000017 - View
Davidia involucrata Dinv35270 GWHABJS00000009 - View
Davidia involucrata Dinv28377 GWHABJS00000004 - View
Durio zibethinus Duzib205G0940 NW_019168381.1 + View
Durio zibethinus Duzib068G1100 NW_019167838.1 - View
Erigeron canadensis ECA238G4709 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA233G5919 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.D01807 Chr04 - View
Eucalyptus grandis Eucgr.A02714 Chr01 - View
Erythranthe guttata Migut.F01074 scaffold_6 - View
Erythranthe guttata Migut.F00275 scaffold_6 - View
Fragaria x ananassa FAN10G0131 PF00201//PF04099//PF04969//PF05002//PF13414 - UDP-glucoronosyl and UDP-glucosyl transferase (UDPGT) // Sybindin-like family (Sybindin) // CS domain (CS) // SGS domain (SGS) // TPR repeat (TPR_11) Fvb7-1 + View
Fragaria x ananassa FAN10G0799 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Fvb7-1 + View
Fragaria x ananassa FAN06G1813 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Fvb7-2 + View
Fragaria x ananassa FAN06G4606 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Fvb7-2 + View
Fragaria vesca FvH4_7g30490 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Fvb7 + View
Gossypium hirsutum Gohir.A08G085400 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) A08 + View
Gossypium hirsutum Gohir.D12G255426 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) D12 - View
Gossypium hirsutum Gohir.D08G109200 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) D08 + View
Gossypium hirsutum Gohir.A12G253000 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) A12 - View
Glycine max Glyma.09G128800 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Gm09 - View
Glycine max Glyma.10G230000 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Gm10 - View
Glycine max Glyma.11G021000 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Gm11 - View
Glycine max Glyma.01G222400 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Gm01 + View
Glycine max Glyma.16G176200 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Gm16 - View
Gossypium raimondii Gorai.004G116900 Chr04 - View
Gossypium raimondii Gorai.003G069500 Chr03 + View
Gossypium raimondii Gorai.008G273400 Chr08 - View
Helianthus annuus HanXRQChr14g0462581 Probable protein SGT1 homolog HanXRQChr14 + View
Hydrangea macrophylla Hma1.2p1_0327F.1_g126510 Hma1.2p1_0327F.1 + View
Lupinus albus Lalb_Chr02g0141281 PTHR22904:SF344 - PROTEIN SGT1 HOMOLOG A-RELATED Lalb_Chr02 + View
Lotus japonicus Lj2g0006755 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) chr2 + View
Lotus japonicus LjContig00312_ERROPOS870357g0000946 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Contig00312_ERROPOS870357 - View
Lonicera japonica Lj1C1007T6 GWHAAZE00000001 + View
Lonicera japonica Lj2A178T48 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_8_6441 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Lsat_1_v8_lg_8 - View
Lactuca sativa Lsat_1_v5_gn_2_131520 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Lsat_1_v8_lg_2 - View
Malus domestica MD01G1210400 phosphatase-related Chr01 + View
Malus domestica MD07G1280600 phosphatase-related Chr07 + View
Manihot esculenta Manes.06G153900 Chromosome06 + View
Medicago truncatula Medtr5g009930 SGT1-2 chr5 - View
Nelumbo nucifera Nn1g01692 chr1 + View
Oryza sativa ssp. japonica Os01g0624500 A subunit of the SCF ubiquitin ligase complex, Molecular chaperone, Regulation of responses to salt stress and bacterial blight chr01 + View
Petunia axillaris Peaxi162Scf00618g00626 Protein SGT1 homolog Peaxi162Scf00618 - View
Punica granatum PGR042G1296 NC_045130.1 - View
Punica granatum PGR031G2632 NC_045127.1 + View
Prunus persica Prupe.2G302800 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Pp02 + View
Populus trichocarpa Potri.004G071100 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Chr04 - View
Populus trichocarpa Potri.017G149800 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Chr17 + View
Phaseolus vulgaris Phvul.002G160300 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Chr02 + View
Quercus lobata QL09p012344 9 - View
Rosa chinensis RcHm_v2.0_Chr1g0378791 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim09G0201200 chr09 + View
Rhododendron simsii Rhsim03G0192500 chr03 + View
Striga asiatica SGA_v2.0_scaffold10G05278 scaffold10 - View
Salvia bowleyana SalBow2G1297 GWHASIU00000007 - View
Salvia bowleyana SalBow4G2106 GWHASIU00000008 - View
Salix brachista Sabra04G0047000 GWHAAZH00000004 - View
Salix brachista Sabra17G0124700 GWHAAZH00000017 + View
Simmondsia chinensis Sc19g0000960 GWHAASQ00000019 + View
Simmondsia chinensis Sc25g0000720 GWHAASQ00000025 + View
Sechium edule Sed0015019 LG07 + View
Sechium edule Sed0008462 LG13 - View
Solanum lycopersicum Solyc03g007670.4 defense signal transduction Sgt1-2 SL4.0ch03 + View
Schrenkiella parvula Sp7g21490 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) ch7-4 + View
Solanum pennellii Sopen03g003600 Functions in plant disease resistance signaling, SCF(TIR1) mediated degradation of Aux/IAA proteins and HSP90 mediated degradation of R resistance proteins. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance. | SGT1B | FUNCTIONS IN: protein binding | INVOLVED IN: in 6 processes | LOCATED IN: SCF ubiquitin ligase complex | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: CS-like domain , Tetratricopeptide-like helical , SGS , Tetratricopeptide repeat-containing , HSP20-like chaperone , Tetratricopeptide repeat , CS domain | BEST Arabidopsis thaliana protein match is: phosphatase-related Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400028904 SGT1 ST4.03ch06 + View
Solanum tuberosum PGSC0003DMG400020884 SGT1 ST4.03ch03 + View
Selenicereus undatus Hund04803 Scaffold_19641 + View
Selenicereus undatus Hund11708 Scaffold_33679 - View
Trochodendron aralioides TAR636G2302 group1 - View
Trochodendron aralioides TAR629G0046 group0 + View
Trochodendron aralioides TAR375G0777 group15 + View
Theobroma cacao Thecc.03G186400 Phosphatase-related Chromosome_3 + View
Utricularia gibba unitig_52.g17724 unitig_52 - View
Vaccinium macrocarpon vmacro06613 Similar to SGT1A: Protein SGT1 homolog A (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro09808 Similar to SGT1B: Protein SGT1 homolog B (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G1038 CM024074.1 - View
Vitis vinifera GSVIVG01028818001 chr16 + View
Vitis vinifera GSVIVG01019422001 chr2 + View