Gene: AT4G23570

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G23570
  • Transcript Identifier AT4G23570.2
  • Gene Type Coding gene
  • Location Chr4 : 12300015-12302493 : positive

Gene Family Information

  • ID HOM05D001916
  • #Genes/#Species 344/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G23570.2
  • symbol SGT1A
  • uniprot Q9SUR9

Descriptions

  • Description phosphatase-like protein
  • Computational description SGT1A; FUNCTIONS IN: protein binding; INVOLVED IN: defense response, ubiquitin-dependent protein catabolic process, embryo development ending in seed dormancy; LOCATED IN: SCF ubiquitin ligase complex, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), SGS (InterPro:IPR007699), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447), CS-like domain (InterPro:IPR007052), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: phosphatase-related (TAIR:AT4G11260.1); Has 12440 Blast hits to 8629 proteins in 714 species: Archae - 442; Bacteria - 3949; Metazoa - 2875; Fungi - 1120; Plants - 1288; Viruses - 0; Other Eukaryotes - 2766 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium Os01g0624500
GO:0002376
IEA
GOA Databaseimmune system process
GO:0045087
IEA
GOA Databaseinnate immune response
GO:0006952
IEA
GOA Databasedefense response
GO:0006952
IMP
Gene Ontologydefense response1
GO:0050821
IBA
Gene Ontologyprotein stabilization2
GO:0050832
IBA
Gene Ontologydefense response to fungus2
GO:0071456
HEP
Gene Ontologycellular response to hypoxia3
GO:1900150
IMP
Gene Ontologyregulation of defense response to fungus1
GO:0071365
IMP
Gene Ontologycellular response to auxin stimulus1
GO:0006511
ISS
Gene Ontologyubiquitin-dependent protein catabolic process4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051087
IEA
Gene Ontologychaperone binding
GO:0051087
IEA
InterProchaperone binding
GO:0005515
IPI
Gene Ontologyprotein binding5
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
GOA Databasenucleus
GO:0005634
HDA
ISM, IBA
Gene Ontologynucleus2 6
GO:0005737
IBA
Gene Ontologycytoplasm2
GO:0005829
HDA
Gene Ontologycytosol7
GO:0019005
ISS
Gene OntologySCF ubiquitin ligase complex4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007699 SGS domain
IPR008978 HSP20-like chaperone
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR019734 Tetratricopeptide repeat
IPR007052 CS domain
IPR044563 Protein Sgt1-like
Mapman id Description
19.1.6.3 Protein homeostasis.protein quality control.Hsp90 chaperone system.Hsp90-co-chaperone (SGT1)