Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G17670 LG-5 + View
Actinidia chinensis Actinidia30075 Lachesis_group24 + View
Actinidia chinensis Actinidia09480 Lachesis_group15 - View
Arabidopsis lyrata AL3G18350 scaffold_3 + View
Arabidopsis lyrata AL8G21870 scaffold_8 - View
Arabidopsis thaliana AT3G07110 Ribosomal protein L13 family protein Ribosomal protein L13 family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: in 6 components%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L13 (InterPro:IPR005822)%2C Ribosomal protein L13%2C eukaryotic/archaeal (InterPro:IPR005755)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT5G48760.2)%3B Has 2682 Blast hits to 2682 proteins in 901 species: Archae - 297%3B Bacteria - 971%3B Metazoa - 344%3B Fungi - 193%3B Plants - 326%3B Viruses - 0%3B Other Eukaryotes - 551 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT5G48760 Ribosomal protein L13 family protein Ribosomal protein L13 family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic ribosome%2C cytosolic large ribosomal subunit%2C large ribosomal subunit%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L13 (InterPro:IPR005822)%2C Ribosomal protein L13%2C eukaryotic/archaeal (InterPro:IPR005755)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT4G13170.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC06g30758 ChrC06 + View
Brassica carinata BcaC06g35762 ChrC06 + View
Brassica napus C07p39400 C07 - View
Brassica napus A06p38920 A06 + View
Brassica oleracea BolC7t41588H C7 - View
Brassica oleracea BolC7t44460H C7 - View
Brassica rapa BraA06t26806Z A06 + View
Beta vulgaris EL10Ac7g17840 K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) Chr7_EL10_PGA_scaffold5 + View
Cannabis sativa CANSAT01G3150 NC_044373.1 - View
Corylus avellana Haze_11604 Similar to RPL13AD: 60S ribosomal protein L13a-4 (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc01_g17000 60S ribosomal protein L13a-2 chr1 - View
Citrus clementina Ciclev10023466m.g scaffold_3 - View
Carpinus fangiana Cfa002573 Cfa01 + View
Cardamine hirsuta CARHR182950 Domain of unknown function (DUF1995) Chr6 + View
Cardamine hirsuta CARHR081710 60S ribosomal protein L13A Chr3 + View
Carya illinoinensis CiPaw.03G149100 K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) Chr03 - View
Carya illinoinensis CiPaw.01G122100 K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) Chr01 - View
Cucumis melo MELO3C020452.2 60S ribosomal protein L13a, putative chr05 + View
Carica papaya Cpa.g.sc8.152 supercontig_8 - View
Capsella rubella Carub.0008s0851 K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) scaffold_8 - View
Capsella rubella Carub.0003s0663 K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) scaffold_3 + View
Daucus carota DCAR_012643 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv19201 GWHABJS00000010 - View
Durio zibethinus Duzib211G0200 NW_019168049.1 + View
Durio zibethinus Duzib151G0168 NW_019167904.1 - View
Durio zibethinus Duzib138G1143 NW_019167893.1 + View
Durio zibethinus Duzib133G1501 NW_019167938.1 + View
Erigeron canadensis ECA236G3330 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA248G0487 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.H00799 Chr08 - View
Eutrema salsugineum Thhalv10021532m.g K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) scaffold_13 + View
Eutrema salsugineum Thhalv10002667m.g K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) scaffold_4 - View
Eutrema salsugineum Thhalv10004924m.g K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) scaffold_6 - View
Gossypium hirsutum Gohir.D07G162800 K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) D07 + View
Glycine max Glyma.08G353900 K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) Gm08 - View
Helianthus annuus HanXRQChr01g0015151 Putative ribosomal protein L13; Ribosomal protein L13, conserved site; Ribosomal protein L13 domain HanXRQChr01 + View
Lotus japonicus Lj3g0018567 K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) chr3 - View
Lonicera japonica Lj2A1130T54 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_5_180300 Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_8_89921 K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) Lsat_1_v8_lg_8 - View
Malus domestica MD10G1164200 Ribosomal protein L13 family protein Chr10 - View
Malus domestica MD05G1175100 Ribosomal protein L13 family protein Chr05 - View
Manihot esculenta Manes.13G046000 Chromosome13 + View
Punica granatum PGR083G1154 NC_045133.1 - View
Prunus persica Prupe.8G202800 K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) Pp08 - View
Populus trichocarpa Potri.001G314500 K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) Chr01 + View
Populus trichocarpa Potri.002G242600 K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) Chr02 + View
Populus trichocarpa Potri.017G054600 K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) Chr17 + View
Phaseolus vulgaris Phvul.008G125900 K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) Chr08 - View
Rosa chinensis RcHm_v2.0_Chr6g0284831 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim13G0045300 chr13 + View
Salix brachista Sabra02G0184900 GWHAAZH00000002 + View
Simmondsia chinensis Sc24g0003540 GWHAASQ00000024 - View
Simmondsia chinensis Sc17g0002320 GWHAASQ00000017 - View
Sechium edule Sed0026920 LG09 - View
Solanum lycopersicum Solyc09g091740.4 60S ribosomal protein L13a (AHRD V3.3 *** B6SJA0_MAIZE) SL4.0ch09 - View
Schrenkiella parvula Sp3g06050 K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) ch3-1 - View
Schrenkiella parvula Sp2g19170 K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) ch2-4 - View
Schrenkiella parvula Sp3g22570 K02872 - large subunit ribosomal protein L13Ae (RP-L13Ae, RPL13A) ch3-2 + View
Solanum pennellii Sopen09g034630 Ribosomal protein L13 family protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, nucleolus, large ribosomal subunit, membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L13 , Ribosomal protein L13, eukaryotic/archaeal | BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein Spenn-ch09 - View
Selenicereus undatus Hund05558 Scaffold_19641 + View
Trochodendron aralioides TAR633G2016 group2 - View
Trochodendron aralioides TAR365G0914 group16 - View
Theobroma cacao Thecc.01G225300 Ribosomal protein L13 family protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104818959 60S ribosomal protein L13a-1 NW_010966177.1 + View
Tarenaya hassleriana THA.LOC104802671 60S ribosomal protein L13a-1 NW_010970490.1 - View
Tarenaya hassleriana THA.LOC104822501 60S ribosomal protein L13a-2-like NW_010966665.1 - View
Tripterygium wilfordii TWI18G0268 NC_052241.1 - View
Tripterygium wilfordii TWI75G1766 NC_052253.1 + View
Vaccinium macrocarpon vmacro15525 Similar to RPL13AD: 60S ribosomal protein L13a-4 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro02760 Similar to RPL13AD: 60S ribosomal protein L13a-4 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G0838 CM024070.1 + View
Vitis vinifera GSVIVG01028661001 chr7 + View