Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0031715 PREDICTED: ubiquitin carboxyl-terminal hydrolase 6 [Vitis vinifera] Chr15 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G7980 LG-8 - View
Acer truncatum Atru.chr1.3637 chr1 + View
Actinidia chinensis Actinidia21744 Lachesis_group1 - View
Actinidia chinensis Actinidia39120 Lachesis_group9 - View
Actinidia chinensis Actinidia09020 Lachesis_group2 - View
Actinidia chinensis Actinidia32136 Lachesis_group27 + View
Arabidopsis lyrata AL1G59650 scaffold_1 - View
Arabidopsis lyrata AL3G35320 scaffold_3 - View
Avicennia marina MSTRG.22603 ScioBoG_3703_HRSCAF_3719 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SBEJ10 K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) arahy.Tifrunner.gnm1.Arahy.19 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZVXK34 K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) arahy.Tifrunner.gnm1.Arahy.09 + View
Arabidopsis thaliana AT3G21280 ubiquitin carboxyl-terminal hydrolase Encodes a ubiquitin-specific protease. ubiquitin-specific protease 7 (UBP7)%3B FUNCTIONS IN: ubiquitin-specific protease activity%2C ubiquitin thiolesterase activity%3B INVOLVED IN: ubiquitin-dependent protein catabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2%2C conserved site (InterPro:IPR018200)%2C Ubiquitin conserved site (InterPro:IPR019954)%2C Ubiquitin (InterPro:IPR000626)%2C Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394)%2C Ubiquitin supergroup (InterPro:IPR019955)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 6 (TAIR:AT1G51710.1)%3B Has 4498 Blast hits to 4321 proteins in 238 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2376%3B Fungi - 767%3B Plants - 642%3B Viruses - 2%3B Other Eukaryotes - 711 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT1G51710 ubiquitin-specific protease 6 Ubiquitin-specific protease 6 (UBP6). Deubiquinating enzyme. Interacts with calmodulin. ubiquitin-specific protease 6 (UBP6)%3B CONTAINS InterPro DOMAIN/s: Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2%2C conserved site (InterPro:IPR018200)%2C Ubiquitin conserved site (InterPro:IPR019954)%2C Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394)%2C Ubiquitin (InterPro:IPR000626)%2C Ubiquitin supergroup (InterPro:IPR019955)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 7 (TAIR:AT3G21280.1)%3B Has 4793 Blast hits to 4476 proteins in 238 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2508%3B Fungi - 875%3B Plants - 657%3B Viruses - 2%3B Other Eukaryotes - 751 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR0789G134 AmTr_v1.0_scaffold00036 - View
Brassica carinata BcaC01g01290 ChrC01 - View
Brassica napus A08p02550 A08 + View
Brassica napus C03p90260 C03 - View
Brassica oleracea BolC6t35793H C6 - View
Brassica oleracea BolC3t21348H C3 - View
Brassica rapa BraA08t32295Z A08 + View
Cannabis sativa CANSAT56G3696 NC_044371.1 + View
Cicer arietinum L. Ca_23300_v3 Ca_LG7_v3 + View
Corylus avellana Haze_15924 Similar to UBP6: Ubiquitin carboxyl-terminal hydrolase 6 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc04_g02170 Ubiquitin carboxyl-terminal hydrolase 6 chr4 - View
Citrus clementina Ciclev10025482m.g scaffold_7 + View
Cardamine hirsuta CARHR041870 Ubiquitin carboxyl-terminal hydrolase Chr1 - View
Carya illinoinensis CiPaw.01G227100 K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) Chr01 - View
Carya illinoinensis CiPaw.02G141900 K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) Chr02 - View
Citrullus lanatus ClCG09G000550 Ubiquitin carboxyl-terminal hydrolase CG_Chr09 + View
Cucumis melo MELO3C024402.2 Ubiquitin carboxyl-terminal hydrolase chr01 - View
Carica papaya Cpa.g.sc131.36 supercontig_131 + View
Capsella rubella Carub.0001s4058 K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) scaffold_1 - View
Capsella rubella Carub.0003s2127 PF00443 - Ubiquitin carboxyl-terminal hydrolase (UCH) scaffold_3 - View
Cucumis sativus L. CsaV3_7G034900 Ubiquitin carboxyl-terminal hydrolase, putative chr7 - View
Daucus carota DCAR_007610 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv37931 GWHABJS00000006 + View
Davidia involucrata Dinv30396 GWHABJS00000019 + View
Durio zibethinus Duzib192G0196 NW_019168037.1 - View
Durio zibethinus Duzib160G0604 NW_019168015.1 + View
Erigeron canadensis ECA232G4630 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.F03104 Chr06 + View
Erythranthe guttata Migut.I01003 scaffold_9 + View
Eutrema salsugineum Thhalv10011383m.g scaffold_7 + View
Eutrema salsugineum Thhalv10020636m.g K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) scaffold_13 + View
Fragaria x ananassa FAN02G0480 K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) Fvb6-4 + View
Fragaria x ananassa FAN05G5071 K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) Fvb6-3 + View
Fragaria x ananassa FAN09G0688 K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) Fvb6-2 - View
Fragaria x ananassa FAN14G2620 K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) Fvb6-1 - View
Fragaria vesca FvH4_6g32980 K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) Fvb6 + View
Gossypium hirsutum Gohir.A10G062050 PTHR24006//PTHR24006:SF121 - FAMILY NOT NAMED // UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 14 A10 - View
Glycine max Glyma.08G195900 K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) Gm08 - View
Glycine max Glyma.07G012300 K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) Gm07 - View
Helianthus annuus HanXRQChr09g0276341 Putative ubiquitin domain; Ubiquitin specific protease domain; Ubiquitin-related domain HanXRQChr09 + View
Lupinus albus Lalb_Chr04g0263081 K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) Lalb_Chr04 - View
Lupinus albus Lalb_Chr25g0280531 K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) Lalb_Chr25 - View
Lotus japonicus Lj3g0023335 K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) chr3 + View
Lonicera japonica Lj5A49T39 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_1_36421 Lsat_1_v8_lg_1 - View
Lactuca sativa Lsat_1_v5_gn_4_95921 Lsat_1_v8_lg_4 - View
Magnolia biondii MBI04_g06225_MAGBIO AED:0.15 Chr04 + View
Malus domestica MD17G1176500 ubiquitin-specific protease 6 Chr17 - View
Malus domestica MD09G1195900 ubiquitin-specific protease 6 Chr09 - View
Manihot esculenta Manes.11G028700 Chromosome11 - View
Manihot esculenta Manes.04G137700 Chromosome04 + View
Medicago truncatula Medtr8g015660 ubiquitin carboxyl-terminal hydrolase chr8 + View
Nelumbo nucifera Nn8g38926 chr8 - View
Nicotiana tabacum Nitab4.5_0003218g0070 Ubiquitin conserved site, Ubiquitin supergroup, Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site, Ubiquitin domain, Ubiquitin carboxyl-terminal hydrolases family 2 Nitab4.5_0003218 - View
Olea europaea Oeu039979.1 chr12 - View
Olea europaea Oeu002520.1 chr12 + View
Petunia axillaris Peaxi162Scf00177g00215 Ubiquitin carboxyl-terminal hydrolase 6 Peaxi162Scf00177 + View
Punica granatum PGR102G0116 NC_045129.1 + View
Prunus persica Prupe.3G052400 K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) Pp03 - View
Pisum sativum Psat4g193640 Ubiquitin carboxyl-terminal hydrolase chr4LG4 - View
Populus trichocarpa Potri.003G033700 K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) Chr03 + View
Phaseolus vulgaris Phvul.010G141700 K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) Chr10 - View
Quercus lobata QL05p015866 5 + View
Rosa chinensis RcHm_v2.0_Chr2g0142531 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim12G0204700 chr12 + View
Salix brachista Sabra01G0156400 GWHAAZH00000001 + View
Simmondsia chinensis Sc12g0009850 GWHAASQ00000012 - View
Sechium edule Sed0015232 LG07 - View
Sechium edule Sed0015765 LG09 - View
Solanum lycopersicum Solyc12g044740.2 Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** G5DX92_SILLA) SL4.0ch12 + View
Schrenkiella parvula Sp3g19320 K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] (USP14, UBP6) ch3-1 - View
Schrenkiella parvula Sp1g38350 PTHR24006//PTHR24006:SF121 - FAMILY NOT NAMED // UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 14 ch1-2 - View
Trochodendron aralioides TAR626G0060 group3 - View
Theobroma cacao Thecc.06G108100 Ubiquitin-specific protease 6 Chromosome_6 + View
Tarenaya hassleriana THA.LOC104817933 ubiquitin carboxyl-terminal hydrolase 6 isoform X1 NW_010966021.1 - View
Tarenaya hassleriana THA.LOC104805917 ubiquitin carboxyl-terminal hydrolase 6-like NW_010961290.1 - View
Tripterygium wilfordii TWI79G1365 NC_052238.1 + View
Vaccinium macrocarpon vmacro16995 Similar to UBP6: Ubiquitin carboxyl-terminal hydrolase 6 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0331G1129 CM024078.1 - View
Vitis vinifera GSVIVG01016888001 chr9 - View