Gene: AT3G21280

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G21280
  • Transcript Identifier AT3G21280.1
  • Gene Type Coding gene
  • Location Chr3 : 7478166-7482037 : negative

Gene Family Information

  • ID HOM05D004014
  • #Genes/#Species 174/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G21280.1
  • symbol UBP7
  • full_name ubiquitin-specific protease 7
  • uniprot Q84WC6

Descriptions

  • Description ubiquitin carboxyl-terminal hydrolase
  • Computational description ubiquitin-specific protease 7 (UBP7); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 6 (TAIR:AT1G51710.1); Has 4498 Blast hits to 4321 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 2376; Fungi - 767; Plants - 642; Viruses - 2; Other Eukaryotes - 711 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016579
IEA
Gene Ontologyprotein deubiquitination
GO:0016579
IEA
InterProprotein deubiquitination
GO:0043161
IEA
Gene Ontologyproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043161
IEA
InterProproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006511
IEA
GOA Databaseubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004843
IEA
Gene Ontologythiol-dependent deubiquitinase
GO:0004843
IEA
InterProthiol-dependent deubiquitinase
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008234
IEA
GOA Databasecysteine-type peptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0005516
IEA
GOA Databasecalmodulin binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044635 Ubiquitin carboxyl-terminal hydrolase 14-like
IPR038765 Papain-like cysteine peptidase superfamily
IPR000626 Ubiquitin-like domain
IPR029071 Ubiquitin-like domain superfamily
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase
Mapman id Description
19.2.3.1.1.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP6-7)