Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0006877 PREDICTED: homeobox protein ATH1 [Vitis vinifera] Chr12 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G9720 LG-5 + View
Acer truncatum Atru.chr7.1043 chr7 - View
Actinidia chinensis Actinidia14708 Lachesis_group14 - View
Actinidia chinensis Actinidia01194 Lachesis_group18 + View
Actinidia chinensis Actinidia30307 Lachesis_group14 + View
Arabidopsis lyrata AL7G18710 scaffold_7 + View
Avicennia marina MSTRG.14049 ScioBoG_18778_HRSCAF_18863 - View
Avicennia marina MSTRG.11664 ScioBoG_17730_HRSCAF_17811 + View
Amaranthus hybridus Ah.11g044710 Homeobox protein ATH1 AmaHy_arrow1_Scaffold_11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WUKV82 PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.4HW5AH PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 arahy.Tifrunner.gnm1.Arahy.16 + View
Arabidopsis thaliana AT4G32980 homeobox protein ATH1 Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1%2C ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably%2C ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM%2C BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM. homeobox gene 1 (ATH1)%3B CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356)%2C Homeodomain-like (InterPro:IPR009057)%2C POX (InterPro:IPR006563)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1)%3B Has 5042 Blast hits to 5042 proteins in 335 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2114%3B Fungi - 285%3B Plants - 2468%3B Viruses - 0%3B Other Eukaryotes - 175 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaNung02149 Contig789 - View
Brassica carinata BcaC09g52096 ChrC09 - View
Brassica napus A01p05200 A01 + View
Brassica napus C01p05690 C01 + View
Brassica napus A03p61730 A03 - View
Brassica napus C07p59450 C07 - View
Brassica oleracea BolC1t00549H C1 + View
Brassica oleracea BolC7t46388H C7 - View
Brassica rapa BraA03t15211Z A03 - View
Brassica rapa BraA01t00503Z A01 + View
Cicer arietinum L. Ca_13174_v3 Ca_LG4_v3 + View
Coffea canephora Cc08_g10440 Putative uncharacterized protein chr8 - View
Citrus clementina Ciclev10010212m.g scaffold_1 - View
Cardamine hirsuta CARHR240990 Homeobox protein ATH1 Chr7 - View
Carya illinoinensis CiPaw.16G029100 PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 Chr16 + View
Carya illinoinensis CiPaw.15G040000 PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 Chr15 + View
Citrullus lanatus ClCG08G016970 Homeobox protein BEL1 homolog CG_Chr08 - View
Cucumis melo MELO3C010759.2 homeobox protein ATH1 chr03 - View
Corchorus olitorius COL.COLO4_21044 hypothetical protein AWUE01017549.1 - View
Chenopodium quinoa AUR62022061 ATH1: Homeobox protein ATH1 C_Quinoa_Scaffold_4319 - View
Chenopodium quinoa AUR62009161 ATH1: Homeobox protein ATH1 C_Quinoa_Scaffold_3674 + View
Capsella rubella Carub.0007s0750 PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 scaffold_7 + View
Cucumis sativus L. CsaV3_2G025630 homeobox protein ATH1 chr2 + View
Daucus carota DCAR_004433 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_007725 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv23432 GWHABJS00000017 + View
Davidia involucrata Dinv27977 GWHABJS00000003 + View
Durio zibethinus Duzib187G0615 NW_019167860.1 + View
Durio zibethinus Duzib150G1201 NW_019167882.1 - View
Durio zibethinus Duzib168G0983 NW_019168159.1 - View
Eucalyptus grandis Eucgr.C03024 Chr03 - View
Erythranthe guttata Migut.A00142 scaffold_1 + View
Eutrema salsugineum Thhalv10025083m.g PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 scaffold_1 + View
Fragaria x ananassa FAN15G3216 PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 Fvb2-4 + View
Fragaria x ananassa FAN27G1277 PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 Fvb2-1 + View
Fragaria x ananassa FAN20G0304 PTHR11850//PTHR11850:SF92 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN ATH1 Fvb2-3 - View
Fragaria vesca FvH4_2g32060 PTHR11850//PTHR11850:SF92 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN ATH1 Fvb2 + View
Gossypium hirsutum Gohir.A07G022116 PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 A07 + View
Gossypium hirsutum Gohir.D07G022500 PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 D07 + View
Gossypium hirsutum Gohir.A01G201200 PTHR11850//PTHR11850:SF111 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // BEL1-LIKE HOMEODOMAIN PROTEIN 1-RELATED A01 - View
Glycine max Glyma.17G230000 PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 Gm17 + View
Glycine max Glyma.04G050800 PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 Gm04 - View
Glycine max Glyma.06G051600 PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 Gm06 - View
Gossypium raimondii Gorai.001G023100 Chr01 + View
Hydrangea macrophylla Hma1.2p1_0482F.1_g162600 Hma1.2p1_0482F.1 + View
Lupinus albus Lalb_Chr14g0367761 PTHR11850//PTHR11850:SF92 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN ATH1 Lalb_Chr14 + View
Lotus japonicus Lj1g0017549 PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 chr1 + View
Lotus japonicus Lj5g0011394 PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 chr5 + View
Lonicera japonica Lj7A277T21 GWHAAZE00000007 - View
Magnolia biondii MBI01_g02262_MAGBIO AED:0.03 Chr01 - View
Malus domestica MD15G1061000 homeobox gene 1 Chr15 + View
Malus domestica MD08G1043600 homeobox gene 1 Chr08 + View
Manihot esculenta Manes.03G047300 Chromosome03 - View
Manihot esculenta Manes.16G079300 Chromosome16 - View
Medicago truncatula Medtr1g016490 BEL1-like homeodomain protein chr1 + View
Nelumbo nucifera Nn8g38910 chr8 + View
Nicotiana tabacum Nitab4.5_0001584g0080 Homeobox KN domain, Homeodomain-like, Homeobox domain, POX domain Nitab4.5_0001584 - View
Olea europaea Oeu047117.2 chr7 + View
Olea europaea Oeu018649.1 chr13 - View
Petunia axillaris Peaxi162Scf00136g00045 BEL1-like homeodomain 6 Peaxi162Scf00136 + View
Punica granatum PGR044G0114 NC_045134.1 + View
Prunus persica Prupe.1G413700 PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 Pp01 + View
Populus trichocarpa Potri.018G054700 PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 Chr18 + View
Populus trichocarpa Potri.006G230700 PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 Chr06 + View
Phaseolus vulgaris Phvul.001G034200 PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 Chr01 - View
Phaseolus vulgaris Phvul.009G077100 Chr09 - View
Quercus lobata QL02p001377 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr6g0310681 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim11G0044800 chr11 + View
Rhododendron simsii Rhsim07G0142800 chr07 + View
Striga asiatica SGA_v2.0_scaffold163G38035 scaffold163 + View
Striga asiatica SGA_v2.0_scaffold169G38685 scaffold169 - View
Salvia bowleyana SalBow1G5080 GWHASIU00000001 - View
Salvia bowleyana SalBow4G0202 GWHASIU00000008 + View
Salix brachista Sabra06G0178900 GWHAAZH00000006 + View
Salix brachista Sabra18G0049400 GWHAAZH00000018 + View
Simmondsia chinensis Sc23g0005580 GWHAASQ00000023 - View
Sechium edule Sed0016305 LG08 - View
Solanum lycopersicum Solyc08g065420.3 bell-like homeodomain protein 4 SL4.0ch08 + View
Schrenkiella parvula Sp7g30750 PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 ch7-5 - View
Solanum pennellii Sopen08g019010 Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM. | homeobox gene 1 (ATH1) | CONTAINS InterPro DOMAIN/s: Homeobox , Homeodomain-like , POX , Homeodomain-related | BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG400029946 Bell-like homeodomain protein 4 ST4.03ch08 + View
Selenicereus undatus Hund19465 Scaffold_33673 + View
Trochodendron aralioides TAR624G0764 group9 - View
Trochodendron aralioides TAR383G0776 group10 - View
Trochodendron aralioides TAR626G1020 group3 + View
Theobroma cacao Thecc.09G052700 Homeobox gene 1 Chromosome_9 - View
Tarenaya hassleriana THA.LOC104803732 homeobox protein ATH1 NW_010971389.1 + View
Trifolium pratense TPR.G13099 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI32G1306 NC_052254.1 + View
Tripterygium wilfordii TWI34G1359 NC_052235.1 - View
Utricularia gibba unitig_748.g7521 unitig_748 - View
Vaccinium macrocarpon vmacro00150 Similar to ATH1: Homeobox protein ATH1 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0647G0054 CM024073.1 - View
Vigna mungo VMungo1309G2321 CM024072.1 + View
Vitis vinifera GSVIVG01035361001 chr4 - View