Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG2G1080 | LG-2 | - | View | |
Acer truncatum | Atru.chr9.2114 | chr9 | + | View | |
Actinidia chinensis | Actinidia28344 | Lachesis_group23 | + | View | |
Arabidopsis lyrata | AL2G11120 | scaffold_2 | + | View | |
Arabidopsis thaliana | AT1G63990 | sporulation 11-2 Encodes AtSPO11-2%2C one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. Plants homozygous for atspo11-2 exhibit a severe sterility phenotype. Both male and female meiosis are severely disrupted in the atspo11-2 mutant%2C and this is associated with severe defects in synapsis during the first meiotic division and reduced meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. Required for double-strand break induction. sporulation 11-2 (SPO11-2)%3B FUNCTIONS IN: DNA topoisomerase (ATP-hydrolyzing) activity%2C DNA binding%2C catalytic activity%2C ATP binding%3B INVOLVED IN: in 11 processes%3B LOCATED IN: chromosome%3B CONTAINS InterPro DOMAIN/s: Spo11/DNA topoisomerase VI%2C subunit A%2C N-terminal (InterPro:IPR013049)%2C Spo11/DNA topoisomerase VI%2C subunit A (InterPro:IPR002815)%3B BEST Arabidopsis thaliana protein match is: Spo11/DNA topoisomerase VI%2C subunit A protein (TAIR:AT5G02820.1)%3B Has 890 Blast hits to 889 proteins in 304 species: Archae - 214%3B Bacteria - 14%3B Metazoa - 169%3B Fungi - 107%3B Plants - 162%3B Viruses - 0%3B Other Eukaryotes - 224 (source: NCBI BLink). | Chr1 | - | View |
Brassica carinata | BcaC04g22660 | ChrC04 | + | View | |
Brassica carinata | BcaB07g31531 | ChrB07 | + | View | |
Brassica napus | A09p14070 | A09 | - | View | |
Brassica napus | C09p16960 | C09 | - | View | |
Brassica oleracea | BolC9t54593H | C9 | - | View | |
Brassica rapa | BraA09t37054Z | A09 | - | View | |
Capsicum annuum | CAN.G532.40 | PGAv.1.6.scaffold532 | - | View | |
Cicer arietinum L. | Ca_24536_v3 | Ca_LG8_v3 | + | View | |
Corylus avellana | Haze_08757 | Similar to SPO11-2: Meiotic recombination protein SPO11-2 (Arabidopsis thaliana OX%3D3702) | 4 | + | View |
Coffea canephora | Cc08_g15260 | Meiotic recombination protein SPO11-2 | chr8 | - | View |
Citrus clementina | Ciclev10024616m.g | scaffold_3 | + | View | |
Carpinus fangiana | Cfa012245 | Cfa05 | - | View | |
Cardamine hirsuta | CARHR046990 | Spo11/DNA topoisomerase VI, subunit A protein | Chr2 | + | View |
Citrullus lanatus | ClCG01G002330 | Meiotic recombination protein SPO11-2 | CG_Chr01 | + | View |
Cucumis melo | MELO3C005714.2 | meiotic recombination protein SPO11-2 | chr09 | - | View |
Corchorus olitorius | COL.COLO4_08361 | Spo11/DNA topoisomerase VI%2C subunit A | AWUE01013723.1 | + | View |
Capsella rubella | Carub.0002s0085 | PTHR10848//PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11 // MEIOTIC RECOMBINATION PROTEIN SPO11-2 | scaffold_2 | + | View |
Cucumis sativus L. | CsaV3_5G002400 | Spo11/DNA topoisomerase VI subunit A | chr5 | + | View |
Davidia involucrata | Dinv37596 | GWHABJS00000017 | + | View | |
Durio zibethinus | Duzib205G2063 | NW_019168381.1 | - | View | |
Durio zibethinus | Duzib084G0419 | NW_019167827.1 | - | View | |
Erigeron canadensis | ECA233G6039 | Conyza_canadensis_scaffold:1 | - | View | |
Eucalyptus grandis | Eucgr.E00781 | Chr05 | - | View | |
Erythranthe guttata | Migut.A00719 | scaffold_1 | + | View | |
Eutrema salsugineum | Thhalv10023831m.g | PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11-2 | scaffold_8 | + | View |
Fragaria x ananassa | FAN18G0903 | PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11-2 | Fvb5-1 | + | View |
Fragaria x ananassa | FAN13G1665 | PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11-2 | Fvb5-2 | - | View |
Fragaria x ananassa | FAN08G0489 | PTHR10848//PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11 // MEIOTIC RECOMBINATION PROTEIN SPO11-2 | Fvb5-3 | + | View |
Fragaria x ananassa | FAN04G2019 | PTHR10848//PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11 // MEIOTIC RECOMBINATION PROTEIN SPO11-2 | Fvb5-4 | - | View |
Fragaria vesca | FvH4_5g03200 | PTHR10848//PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11 // MEIOTIC RECOMBINATION PROTEIN SPO11-2 | Fvb5 | - | View |
Gossypium hirsutum | Gohir.D08G134500 | PTHR10848//PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11 // MEIOTIC RECOMBINATION PROTEIN SPO11-2 | D08 | + | View |
Gossypium hirsutum | Gohir.A08G114200 | PTHR10848//PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11 // MEIOTIC RECOMBINATION PROTEIN SPO11-2 | A08 | + | View |
Glycine max | Glyma.11G021300 | PTHR10848//PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11 // MEIOTIC RECOMBINATION PROTEIN SPO11-2 | Gm11 | + | View |
Gossypium raimondii | Gorai.004G137600 | Chr04 | + | View | |
Hydrangea macrophylla | Hma1.2p1_0216F.1_g091080 | Hma1.2p1_0216F.1 | - | View | |
Lupinus albus | Lalb_Chr16g0377031 | PTHR10848//PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11 // MEIOTIC RECOMBINATION PROTEIN SPO11-2 | Lalb_Chr16 | + | View |
Lotus japonicus | LjContig00312_ERROPOS870357g0025239 | PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11-2 | Contig00312_ERROPOS870357 | + | View |
Lonicera japonica | Lj8A216G70 | GWHAAZE00000008 | + | View | |
Malus domestica | MD14G1112000 | sporulation 11-2 | Chr14 | - | View |
Medicago truncatula | Medtr5g009990 | meiotic recombination SPO11-like protein | chr5 | + | View |
Nelumbo nucifera | Nn1g01675 | chr1 | - | View | |
Nicotiana tabacum | Nitab4.5_0007906g0050 | Spo11/DNA topoisomerase VI, subunit A, Winged helix-turn-helix DNA-binding domain, Spo11/DNA topoisomerase VI, subunit A, N-terminal | Nitab4.5_0007906 | + | View |
Nicotiana tabacum | Nitab4.5_0003015g0120 | Spo11/DNA topoisomerase VI, subunit A | Nitab4.5_0003015 | - | View |
Petunia axillaris | Peaxi162Scf00074g01731 | Meiotic recombination protein SPO11-2 | Peaxi162Scf00074 | + | View |
Punica granatum | PGR042G0367 | NC_045130.1 | + | View | |
Prunus persica | Prupe.5G106600 | PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11-2 | Pp05 | - | View |
Pisum sativum | Psat2g183760 | DNA topoisomerase VI subunit A family signature | chr2LG1 | - | View |
Populus trichocarpa | Potri.001G099100 | PTHR10848//PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11 // MEIOTIC RECOMBINATION PROTEIN SPO11-2 | Chr01 | + | View |
Phaseolus vulgaris | Phvul.002G160000 | PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11-2 | Chr02 | - | View |
Quercus lobata | QL12p031785 | 12 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr7g0196581 | RcHm_v2.0_Chr7 | + | View | |
Rhododendron simsii | Rhsim02G0235800 | chr02 | - | View | |
Salix brachista | Sabra01G0074300 | GWHAAZH00000001 | + | View | |
Simmondsia chinensis | Sc01g0009860 | GWHAASQ00000001 | - | View | |
Solanum lycopersicum | Solyc08g081590.3 | Meiotic recombination protein SPO11-2 (AHRD V3.3 *** A0A2G3DAR1_CAPCH) | SL4.0ch08 | - | View |
Schrenkiella parvula | Sp2g00700 | PTHR10848//PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11 // MEIOTIC RECOMBINATION PROTEIN SPO11-2 | ch2-1 | + | View |
Solanum pennellii | Sopen08g029900 | Encodes AtSPO11-2, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. Plants homozygous for atspo11-2 exhibit a severe sterility phenotype. Both male and female meiosis are severely disrupted in the atspo11-2 mutant, and this is associated with severe defects in synapsis during the first meiotic division and reduced meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. Required for double-strand break induction. | sporulation 11-2 (SPO11-2) | FUNCTIONS IN: DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, catalytic activity, ATP binding | INVOLVED IN: in 11 processes | LOCATED IN: chromosome | CONTAINS InterPro DOMAIN/s: Spo11/DNA topoisomerase VI, subunit A, N-terminal , Spo11/DNA topoisomerase VI, subunit A | BEST Arabidopsis thaliana protein match is: Spo11/DNA topoisomerase VI, subunit A protein | Spenn-ch08 | - | View |
Solanum tuberosum | PGSC0003DMG400012184 | Meiotic recombination protein SPO11 | ST4.03ch08 | - | View |
Trochodendron aralioides | TAR375G0317 | group15 | - | View | |
Theobroma cacao | Thecc.03G286600 | Sporulation 11-2 | Chromosome_3 | - | View |
Tarenaya hassleriana | THA.LOC104823599 | meiotic recombination protein SPO11-2 | NW_010966881.1 | - | View |
Trifolium pratense | TPR.G6687 | Tp57577_TGAC_v2_LG2 | - | View | |
Vaccinium macrocarpon | vmacro11411 | Similar to SPO11-2: Meiotic recombination protein SPO11-2 (Arabidopsis thaliana OX%3D3702) | chr8_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vigna mungo | VMungo1215G0710 | CM024074.1 | + | View | |
Vitis vinifera | GSVIVG01019418001 | chr2 | - | View |