Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0006981 PREDICTED: transcription factor BIM1 isoform X1 [Vitis vinifera] Chr2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr11.1550 chr11 + View
Actinidia chinensis Actinidia19903 Lachesis_group10 - View
Actinidia chinensis Actinidia31927 Lachesis_group15 - View
Arabidopsis lyrata AL2G28060 scaffold_2 + View
Avicennia marina MSTRG.783 ScioBoG_102831_HRSCAF_103044 - View
Amaranthus hybridus Ah.02g126640 AmaHy_arrow1_Scaffold_2 + View
Aquilegia oxysepala Aqoxy3G00556 CHR03 - View
Aquilegia oxysepala Aqoxy3G03756 CHR03 - View
Arabidopsis thaliana AT1G69010 BES1-interacting Myc-like protein 2 Encodes BES1-INTERACTING MYC-LIKE 2 (BIM2)%2C a PAR1 (PHYTOCHROME RAPIDLY REGULATED 1)-interacting protein that positively modulates the shade avoidance syndrome in Arabidopsis seedlings. BES1-interacting Myc-like protein 2 (BIM2)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: dTDP-rhamnose biosynthetic process%2C regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G08130.3)%3B Has 2743 Blast hits to 2732 proteins in 181 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 222%3B Fungi - 63%3B Plants - 2453%3B Viruses - 0%3B Other Eukaryotes - 5 (source: NCBI BLink). Chr1 + View
Amborella trichopoda ATR0691G058 AmTr_v1.0_scaffold00006 - View
Brassica carinata BcaC08g46352 ChrC08 - View
Brassica napus C06p40830 C06 - View
Brassica napus A02p15560 A02 + View
Brassica oleracea BolC2t08639H C2 + View
Brassica oleracea BolC6t39350H C6 + View
Brassica rapa BraA07t31132Z A07 + View
Beta vulgaris EL10Ac6g14666 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 Chr6_EL10_PGA_scaffold0 + View
Cannabis sativa CANSAT64G0914 NC_044379.1 + View
Cannabis sativa CANSAT64G1735 NC_044379.1 + View
Corylus avellana Haze_11854 Similar to BIM2: Transcription factor BIM2 (Arabidopsis thaliana OX%3D3702) 9 + View
Corylus avellana Haze_14374 Similar to BIM3: Transcription factor BIM3 (Arabidopsis thaliana OX%3D3702) 5 + View
Coffea canephora Cc11_g11510 Transcription factor BIM2 chr11 + View
Citrus clementina Ciclev10020248m.g scaffold_3 - View
Citrus clementina Ciclev10032020m.g scaffold_4 + View
Carpinus fangiana Cfa008842 Cfa03 + View
Carpinus fangiana Cfa007701 Cfa03 - View
Cardamine hirsuta CARHR061880 BHLH transcription factor Chr2 + View
Carya illinoinensis CiPaw.06G095300 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 Chr06 - View
Carya illinoinensis CiPaw.05G121000 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 Chr05 + View
Citrullus lanatus ClCG08G010620 BHLH transcription factor CG_Chr08 - View
Cucumis melo MELO3C011399.2 LOW QUALITY PROTEIN: transcription factor BIM2 chr03 - View
Corchorus olitorius COL.COLO4_27783 hypothetical protein AWUE01019685.1 + View
Chenopodium quinoa AUR62007865 BIM2: Transcription factor BIM2 C_Quinoa_Scaffold_2646 - View
Chenopodium quinoa AUR62003052 BIM2: Transcription factor BIM2 C_Quinoa_Scaffold_1000 - View
Capsella rubella Carub.0006s0702 scaffold_6 - View
Capsella rubella Carub.0002s1562 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 scaffold_2 + View
Cucumis sativus L. CsaV3_6G033930 Transcription factor BIM2 chr6 - View
Davidia involucrata Dinv15579 GWHABJS00000018 - View
Davidia involucrata Dinv34016 GWHABJS00000008 + View
Durio zibethinus Duzib251G0026 NW_019167971.1 + View
Durio zibethinus Duzib084G1433 NW_019167827.1 - View
Durio zibethinus Duzib268G1711 NW_019168270.1 + View
Durio zibethinus Duzib068G1269 NW_019167838.1 - View
Erigeron canadensis ECA233G2616 Conyza_canadensis_scaffold:1 - View
Erythranthe guttata Migut.L01158 scaffold_12 + View
Erythranthe guttata Migut.E00254 scaffold_5 - View
Eutrema salsugineum Thhalv10018889m.g PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 scaffold_9 - View
Fragaria x ananassa FAN12G1039 PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 Fvb4-3 - View
Fragaria x ananassa FAN05G4264 PF00010//PF12937 - Helix-loop-helix DNA-binding domain (HLH) // F-box-like (F-box-like) Fvb6-3 - View
Fragaria x ananassa FAN08G1560 PTHR12565:SF153 - TRANSCRIPTION FACTOR BIM1 Fvb5-3 - View
Fragaria x ananassa FAN09G1236 PTHR12565:SF85 - TRANSCRIPTION FACTOR BIM3 Fvb6-2 - View
Fragaria x ananassa FAN13G0549 PTHR12565:SF153 - TRANSCRIPTION FACTOR BIM1 Fvb5-2 + View
Fragaria x ananassa FAN22G1661 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 Fvb4-1 + View
Fragaria x ananassa FAN14G2506 PTHR12565:SF85 - TRANSCRIPTION FACTOR BIM3 Fvb6-1 - View
Fragaria x ananassa FAN17G2461 PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 Fvb4-2 - View
Fragaria x ananassa FAN07G0900 PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 Fvb4-4 - View
Fragaria x ananassa FAN02G2480 PTHR12565:SF85 - TRANSCRIPTION FACTOR BIM3 Fvb6-4 + View
Fragaria x ananassa FAN18G2916 PTHR12565:SF153 - TRANSCRIPTION FACTOR BIM1 Fvb5-1 + View
Fragaria vesca FvH4_4g29230 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 Fvb4 + View
Fragaria vesca FvH4_5g13341 PTHR12565//PTHR12565:SF153 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM1 Fvb5 + View
Gossypium hirsutum Gohir.A13G088700 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 A13 - View
Gossypium hirsutum Gohir.D12G162500 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 D12 + View
Gossypium hirsutum Gohir.D13G085900 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 D13 - View
Gossypium hirsutum Gohir.A12G159200 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 A12 + View
Glycine max Glyma.01G066600 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 Gm01 - View
Glycine max Glyma.18G275400 PTHR12565:SF85 - TRANSCRIPTION FACTOR BIM3 Gm18 + View
Glycine max Glyma.08G252800 PTHR12565:SF85 - TRANSCRIPTION FACTOR BIM3 Gm08 + View
Glycine max Glyma.02G123400 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 Gm02 - View
Gossypium raimondii Gorai.013G098000 Chr13 - View
Gossypium raimondii Gorai.008G175100 Chr08 + View
Lupinus albus Lalb_Chr13g0302651 PTHR12565//PTHR12565:SF153 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM1 Lalb_Chr13 + View
Lupinus albus Lalb_Chr17g0341501 PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 Lalb_Chr17 - View
Lupinus albus Lalb_Chr10g0099231 PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 Lalb_Chr10 - View
Lotus japonicus Lj2g0012609 PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 chr2 - View
Lotus japonicus Lj1g0024467 PTHR12565:SF85 - TRANSCRIPTION FACTOR BIM3 chr1 - View
Lonicera japonica Lj3A1026T82 GWHAAZE00000003 + View
Lactuca sativa Lsat_1_v5_gn_8_36960 KOG2483 - Upstream transcription factor 2/L-myc-2 protein Lsat_1_v8_lg_8 - View
Magnolia biondii MBI14_g34644_MAGBIO AED:0.11 Chr14 - View
Malus domestica MD16G1055100 BES1-interacting Myc-like protein 2 Chr16 + View
Malus domestica MD13G1056100 BES1-interacting Myc-like protein 2 Chr13 + View
Malus domestica MD14G1217100 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr14 - View
Malus domestica MD17G1066600 BES1-interacting Myc-like protein 2 Chr17 - View
Manihot esculenta Manes.02G060100 Chromosome02 - View
Manihot esculenta Manes.06G079000 Chromosome06 + View
Manihot esculenta Manes.01G104200 Chromosome01 - View
Medicago truncatula Medtr5g048350 transcription factor BIM2-like protein chr5 - View
Nelumbo nucifera Nn4g23548 chr4 - View
Nicotiana tabacum Nitab4.5_0001071g0060 Myc-type, basic helix-loop-helix (bHLH) domain Nitab4.5_0001071 - View
Olea europaea Oeu055076.1 chr11 + View
Olea europaea Oeu048116.1 chr12 - View
Oryza sativa ssp. japonica Os09g0475400 Helix-loop-helix DNA-binding domain containing protein. Similar to cDNA clone:J023084K14, full insert sequence. chr09 + View
Oryza sativa ssp. japonica Os08g0490000 Helix-loop-helix DNA-binding domain containing protein. Similar to Transcription factor BIM2. chr08 + View
Petunia axillaris Peaxi162Scf00188g01023 Unknown protein Peaxi162Scf00188 + View
Punica granatum PGR102G1812 NC_045129.1 - View
Prunus persica Prupe.5G210500 Pp05 - View
Prunus persica Prupe.1G294200 Pp01 - View
Prunus persica Prupe.3G248100 PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 Pp03 + View
Papaver somniferum PSO782G2663 NC_039365.1 - View
Papaver somniferum PSO478G1821 NC_039361.1 + View
Papaver somniferum PSO017G4194 NC_039362.1 - View
Populus trichocarpa Potri.010G137600 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 Chr10 + View
Populus trichocarpa Potri.015G048000 PTHR12565:SF153 - TRANSCRIPTION FACTOR BIM1 Chr15 + View
Populus trichocarpa Potri.008G112000 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 Chr08 - View
Populus trichocarpa Potri.017G101700 PTHR12565:SF85 - TRANSCRIPTION FACTOR BIM3 Chr17 + View
Phaseolus vulgaris Phvul.008G025500 PTHR12565:SF85 - TRANSCRIPTION FACTOR BIM3 Chr08 - View
Rosa chinensis RcHm_v2.0_Chr7g0183781 RcHm_v2.0_Chr7 - View
Rosa chinensis RcHm_v2.0_Chr4g0437281 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim09G0121400 chr09 + View
Rhododendron simsii Rhsim12G0071100 chr12 + View
Striga asiatica SGA_v2.0_scaffold287G47190 scaffold287 - View
Striga asiatica SGA_v2.0_scaffold36G14494 scaffold36 - View
Striga asiatica SGA_v2.0_scaffold16G07829 scaffold16 - View
Salvia bowleyana SalBow2G0832 GWHASIU00000007 - View
Salix brachista Sabra04G0072000 GWHAAZH00000004 + View
Salix brachista Sabra08G0084700 GWHAAZH00000008 - View
Salix brachista Sabra10G0106100 GWHAAZH00000010 + View
Simmondsia chinensis Sc04g0007320 GWHAASQ00000004 + View
Solanum lycopersicum Solyc05g011810.4 bHLH transcription factor 040 SL4.0ch05 + View
Solanum lycopersicum Solyc04g005280.4 bHLH transcription factor 028 SL4.0ch04 + View
Schrenkiella parvula Sp5g24120 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 ch5-6 + View
Solanum pennellii Sopen05g006570 BES1-interacting Myc-like protein 2 (BIM2) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: dTDP-rhamnose biosynthetic process, regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein Spenn-ch05 + View
Solanum pennellii Sopen04g001260 BES1-interacting Myc-like protein 2 (BIM2) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: dTDP-rhamnose biosynthetic process, regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400019654 BHLH domain class transcription factor ST4.03ch05 - View
Selenicereus undatus Hund25152 Scaffold_3410 + View
Selenicereus undatus Hund05817 Scaffold_19641 + View
Trochodendron aralioides TAR374G1509 group12 - View
Trochodendron aralioides TAR629G1145 group0 + View
Trochodendron aralioides TAR622G0078 group8 + View
Theobroma cacao Thecc.02G321700 BES1-interacting Myc-like protein 2 Chromosome_2 + View
Theobroma cacao Thecc.03G109700 Transcription factor BIM1 Chromosome_3 - View
Theobroma cacao Thecc.04G107700 BES1-interacting Myc-like protein 2 Chromosome_4 - View
Tarenaya hassleriana THA.LOC104821989 transcription factor BIM2 NW_010966617.1 + View
Tarenaya hassleriana THA.LOC104818360 transcription factor BIM1 isoform X1 NW_010966092.1 - View
Tripterygium wilfordii TWI31G0420 NC_052233.1 + View
Vaccinium macrocarpon vmacro01295 Similar to BIM2: Transcription factor BIM2 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G0538 CM024070.1 - View
Vigna mungo VMungo1215G2783 CM024074.1 + View
Vitis vinifera GSVIVG01010100001 chr1 - View
Zea mays Zm00001eb315910 Zm00001e034451 Transcription factor BIM2 7 + View